Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30245
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6) 39 0.003
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.080
SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.24
SB_35034| Best HMM Match : ENTH (HMM E-Value=0) 31 0.43
SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_54868| Best HMM Match : Rhabdo_NV (HMM E-Value=1.1) 31 0.74
SB_21866| Best HMM Match : UCH (HMM E-Value=0) 31 0.74
SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14) 30 0.98
SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.98
SB_21939| Best HMM Match : F-box (HMM E-Value=0.001) 30 0.98
SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23) 30 1.3
SB_7949| Best HMM Match : Na_Ca_ex (HMM E-Value=3.4) 29 1.7
SB_43091| Best HMM Match : DUF1059 (HMM E-Value=2.8) 29 2.3
SB_46895| Best HMM Match : rve (HMM E-Value=1.6e-25) 28 4.0
SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_37892| Best HMM Match : rve (HMM E-Value=2.1e-16) 28 4.0
SB_20579| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.39) 28 4.0
SB_18313| Best HMM Match : Trans_reg_C (HMM E-Value=0.91) 28 4.0
SB_53056| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_13016| Best HMM Match : ResIII (HMM E-Value=0.62) 28 5.3
SB_33579| Best HMM Match : Laminin_G_2 (HMM E-Value=3.2e-34) 28 5.3
SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_52684| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 27 6.9
SB_20145| Best HMM Match : WD40 (HMM E-Value=2.4e-09) 27 6.9
SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_8759| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_5065| Best HMM Match : Histone (HMM E-Value=2.6e-33) 27 6.9
SB_50637| Best HMM Match : Drf_FH1 (HMM E-Value=1.4) 27 6.9
SB_27525| Best HMM Match : PAS (HMM E-Value=0.99) 27 6.9
SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_19238| Best HMM Match : DUF729 (HMM E-Value=1.4) 27 6.9
SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081) 27 6.9
SB_5429| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_47409| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-17) 27 9.2
SB_43821| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_58036| Best HMM Match : Cadherin (HMM E-Value=0) 27 9.2
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 27 9.2
>SB_13864| Best HMM Match : FtsX (HMM E-Value=1.6)
Length = 269
Score = 38.7 bits (86), Expect = 0.003
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = -2
Query: 512 TVGTAAEA-IASDSIATGQTAKTST-GATRDSEVTGAGSGTATESLSITAGRTSGAFVVA 339
T TAA A A+ + ATG T T+T AT + VT A + TAT + + TA TS A V A
Sbjct: 141 TTATAATATAAATATATGTTTATATVTATATATVTAAATATATATATATATTTSTATVTA 200
Score = 33.9 bits (74), Expect = 0.080
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = -2
Query: 503 TAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRTSGAFVVA 339
TAA A + + AT T T+ AT + T G+ TAT +++ TA T A A
Sbjct: 126 TAAAAATAAATATATTTATAATATAAATATATGTTTATATVTATATATVTAAATA 180
Score = 33.1 bits (72), Expect = 0.14
Identities = 26/101 (25%), Positives = 42/101 (41%)
Frame = -2
Query: 503 TAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRTSGAFVVAEICDX 324
TAA ++A+ + A A T+T T + T + TAT + + TA T A A +
Sbjct: 118 TAAASVAATAAAAATAAATATATTTATAATATAAATATATGTTTATATVTATATATV-TA 176
Query: 323 XXXXXXXXXXXXXXXSIDLVTVSGIASVTVSGIASAFSDST 201
+ TV+ A+VTV+ A+ +T
Sbjct: 177 AATATATATATATATTTSTATVTATATVTVTATAATTVTAT 217
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = -2
Query: 512 TVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRTSGA 351
T AA A A+ S+A A + AT + T A + TAT + + TA T+ A
Sbjct: 110 TATAAAAATAAASVAATAAAAATAAATATATTT-ATAATATAAATATATGTTTA 162
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = -2
Query: 512 TVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRTSGAFVVAEI 333
T A A+ ++ TA + AT + T + TAT ++++TA T+ V A +
Sbjct: 161 TATATVTATATATVTAAATATATATATATATTTSTATVTATATVTVTA--TAATTVTATV 218
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 33.9 bits (74), Expect = 0.080
Identities = 31/115 (26%), Positives = 47/115 (40%), Gaps = 2/115 (1%)
Frame = +1
Query: 118 TLSQPRTSPPKQLSPPKEVSSRQPTLEQVESENAEAIPETVTEAIPE-TVTKSIEDAXXX 294
T++ T P+ PP+ + + T+ +E E T A+PE T+T+ A
Sbjct: 3356 TVAPESTVAPETTVPPETTDAPETTVAPETTEEPETTVVPETTAVPETTITQETTVAPET 3415
Query: 295 XXXXXXXXXXXSQI-SATTNAPEVLPAVIDSDSVAVPEPAPVTSESLVAPVEVLA 456
S + S TT PE + ++ VP P T ES VAP +A
Sbjct: 3416 TALPESTVAPESTVASMTTVLPE---TTVVPETTVVPGTTP-TPESTVAPETTVA 3466
Score = 29.5 bits (63), Expect = 1.7
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 8/121 (6%)
Frame = +1
Query: 118 TLSQPRTSPPKQLSPPKEVSSRQPTLEQVESENAEAIPETVTEAIPETVTKSIEDAXXXX 297
TL+ T+ P+ PP+ + + TL V + E+ +VT PE+ T + E
Sbjct: 1630 TLALETTTAPETTLPPETTMASESTLASVTTMAPESTVASVTTMAPES-TLAPE---TII 1685
Query: 298 XXXXXXXXXXSQISATTNAPE---VLPAVIDSDSVAVPEP--AP---VTSESLVAPVEVL 453
+ + TT PE L + + S + PE AP + SES VAP +
Sbjct: 1686 ASETTVAPETTMVPGTTLEPETTMALESTVASVTTMAPESTLAPEITIASESTVAPGTTM 1745
Query: 454 A 456
A
Sbjct: 1746 A 1746
Score = 27.5 bits (58), Expect = 6.9
Identities = 25/117 (21%), Positives = 40/117 (34%), Gaps = 1/117 (0%)
Frame = +1
Query: 109 ISQTLSQPRTS-PPKQLSPPKEVSSRQPTLEQVESENAEAIPETVTEAIPETVTKSIEDA 285
+ +T P T+ PP+ P+ + + T E ++ E T PET S E
Sbjct: 3126 LPETTDAPETTVPPETTDAPETTVASETTAEPDTTQAPETTVTPETTKAPETTVAS-ETT 3184
Query: 286 XXXXXXXXXXXXXXSQISATTNAPEVLPAVIDSDSVAVPEPAPVTSESLVAPVEVLA 456
+ + V I ++ PE + ES VAP +A
Sbjct: 3185 VTPETTVAPETTEEPETTVVPETTAVPETTITQETTVAPETTSL-PESTVAPESTVA 3240
Score = 27.1 bits (57), Expect = 9.2
Identities = 21/95 (22%), Positives = 36/95 (37%)
Frame = +1
Query: 121 LSQPRTSPPKQLSPPKEVSSRQPTLEQVESENAEAIPETVTEAIPETVTKSIEDAXXXXX 300
L+ T+ P+ PP+ + + TL Q + E T PET T ++E
Sbjct: 2211 LALETTTAPETTLPPETTMASESTLAQESTLAPETTMVPGTTLEPET-TMALESTVASVT 2269
Query: 301 XXXXXXXXXSQISATTNAPEVLPAVIDSDSVAVPE 405
+I+ T + +I S++ PE
Sbjct: 2270 TMAPEFTLAPEITMTPESTVAPETIIASETTVAPE 2304
>SB_5839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = -2
Query: 503 TAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRTSGAFVVAEI 333
TA + + AT T T+T AT + T + TAT + ++TA T+ A V A +
Sbjct: 319 TATVTTTTTATATATTTATAT-ATTTATATATATATATATATVTATATATATVTATV 374
Score = 30.3 bits (65), Expect = 0.98
Identities = 20/61 (32%), Positives = 31/61 (50%)
Frame = -2
Query: 515 VTVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRTSGAFVVAE 336
VTV TA + + + AT T+T AT T + TAT + ++TA ++ A V A
Sbjct: 685 VTV-TATATVTATATATATATATATAAT----TTATATATATVTATVTAAASATAAVTAT 739
Query: 335 I 333
+
Sbjct: 740 V 740
Score = 28.7 bits (61), Expect = 3.0
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -2
Query: 515 VTVGTAAEAIASDSI-ATGQTAKTSTG-ATRDSEVTGAGSGTATESLSITAGRTSGAFVV 342
VT T A A A+ + AT T T+T AT + T + TAT + ++TA T V
Sbjct: 322 VTTTTTATATATTTATATATTTATATATATATATATATVTATATATATVTATVTVTVTVT 381
Query: 341 A 339
A
Sbjct: 382 A 382
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -2
Query: 515 VTVGTAAEAIASDSIATGQTAKTSTG-ATRDSEVTGAGSGTATESLSITAGRTS 357
VTV A A + AT T T+T AT + T + TAT + + TA T+
Sbjct: 305 VTVTETAAAATATVTATVTTTTTATATATTTATATATTTATATATATATATATA 358
Score = 27.5 bits (58), Expect = 6.9
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -2
Query: 503 TAAEAIASDSIATGQTAKTSTG-ATRDSEVTGAGSGTATESLSITAGRTSGAFVVA 339
TA + S AT T T AT + VT + TAT ++++TA T A A
Sbjct: 644 TATVTVTSTVTATATVTATVTATATVTATVTVTATATATATVTVTATATVTATATA 699
Score = 27.5 bits (58), Expect = 6.9
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = -2
Query: 515 VTVGTAAEAIASDSI-ATGQTAKTSTG-ATRDSEVTGAGS-GTATESLSITAGRTSGAFV 345
VTV A A A+ ++ AT T+T AT + T A + TAT + ++TA T+ A
Sbjct: 673 VTVTATATATATVTVTATATVTATATATATATATATAATTTATATATATVTATVTAAASA 732
Query: 344 VAEI 333
A +
Sbjct: 733 TAAV 736
>SB_35034| Best HMM Match : ENTH (HMM E-Value=0)
Length = 455
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -2
Query: 500 AAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLS 378
A+ I SDS+ +GQT S G+ D GA G S S
Sbjct: 154 ASSGIGSDSVRSGQTTLGSGGSLTDMRTAGADGGALPTSRS 194
>SB_430| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2202
Score = 30.7 bits (66), Expect = 0.74
Identities = 31/124 (25%), Positives = 46/124 (37%), Gaps = 6/124 (4%)
Frame = -2
Query: 482 SDSIATGQTAKTSTGATRDSEVTGA----GSGTATESLSITAGRTSGAFVVAEICDXXXX 315
S + ++G++ TSTG S T + GSGT + + +G T+G
Sbjct: 525 SSTTSSGESGTTSTGGNTGSGTTSSGGNTGSGTTSSGGNTGSGTTTGGVNTGSGTTTGGL 584
Query: 314 XXXXXXXXXXXXSIDLVTVSGI--ASVTVSGIASAFSDSTCSRVGCREETSLGGDNCLGG 141
S T SG+ S T +G + S +T V T+ GG N G
Sbjct: 585 NTGSGTTTGGVNSGSGTTTSGVNTGSGTTTGGVNTGSGTTTGEVNTGSGTTTGGMNTGSG 644
Query: 140 EVRG 129
G
Sbjct: 645 TTTG 648
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 3/56 (5%)
Frame = -2
Query: 512 TVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGA---GSGTATESLSITAGRTSG 354
T G S TG +S G T TG GSGT T L+ +G T+G
Sbjct: 538 TGGNTGSGTTSSGGNTGSGTTSSGGNTGSGTTTGGVNTGSGTTTGGLNTGSGTTTG 593
>SB_54868| Best HMM Match : Rhabdo_NV (HMM E-Value=1.1)
Length = 775
Score = 30.7 bits (66), Expect = 0.74
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -1
Query: 375 YSRQNFRSICSRGNL*WSFFNRCFGRYSYCC 283
Y N R +C + + W+ CFG YCC
Sbjct: 5 YFASNSRMVCHQRQVCWATNADCFGNQCYCC 35
>SB_21866| Best HMM Match : UCH (HMM E-Value=0)
Length = 2165
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 130 PRTSPPKQLSPPKEVSSRQPT-LEQVESENAE 222
P T+PP Q + P +S +PT EQ+E +NA+
Sbjct: 18 PATTPPSQPTQPATPASSEPTNTEQLEDKNAD 49
>SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14)
Length = 1085
Score = 30.3 bits (65), Expect = 0.98
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +1
Query: 115 QTLSQPRTSPPKQLSP-PKEVSSRQ--PTLEQVESENAEAIPETV 240
Q L PRT PP+QL P P+ + +Q P E ++ + PET+
Sbjct: 976 QLLPCPRTLPPQQLLPCPETIPPQQLLPCPETIQPQQLLPCPETI 1020
>SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 30.3 bits (65), Expect = 0.98
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 130 PRTSPPKQLSPPKEVSSRQP-TLEQVESENAEAIPETVTEAIPETVT 267
P T+P PPK P T+++ + E+A A P T + T T
Sbjct: 602 PSTTPTTTQEPPKPADPSAPVTVKKEQGESAAATPTPTTTTVAPTAT 648
>SB_21939| Best HMM Match : F-box (HMM E-Value=0.001)
Length = 909
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -2
Query: 479 DSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRTSGAFVVAE 336
DS +T + D EV+ G G ++ S+ ITAG FV E
Sbjct: 842 DSSSTSDEDSNMFASASDGEVSSDGQGESSTSMHITAGGEGPLFVSVE 889
>SB_35812| Best HMM Match : Atrophin-1 (HMM E-Value=0.23)
Length = 4240
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +1
Query: 112 SQTLSQPRTSPPKQLSPPKEVSSRQPTLEQVES--ENAEAIPET 237
SQ SQP S P+ PPK ++ Q Q + ++ E +P T
Sbjct: 890 SQRTSQPTLSQPRSQHPPKAMAPEQTLFSQPSTPLDHKEEVPRT 933
>SB_7949| Best HMM Match : Na_Ca_ex (HMM E-Value=3.4)
Length = 168
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = -2
Query: 512 TVGTAAEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRTSGAFVVA 339
T A AIA+ + TA + AT + T + TAT + + TA T+ A A
Sbjct: 51 TATATATAIATATATATATATATATATATATATATATATATATATATATATATATATA 108
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -2
Query: 515 VTVGTA-AEAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAGRTSGAFVVA 339
+ + TA A AIA + TA + AT + T + TAT + + TA T+ A A
Sbjct: 23 IAIATATATAIAIATATATATATATATATATATATAIATATATATATATATATATATATA 82
>SB_43091| Best HMM Match : DUF1059 (HMM E-Value=2.8)
Length = 291
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1
Query: 40 RQGWEAGNIDYMGADSFDNI 99
R+ WE G DY G DSF NI
Sbjct: 250 RKQWENGRPDYNGRDSFPNI 269
>SB_46895| Best HMM Match : rve (HMM E-Value=1.6e-25)
Length = 329
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 346 TNAPEVLPAVIDSDSVAVPEPAPVTSES 429
T P VLPA SD+VA P+P+T+ S
Sbjct: 290 TTPPAVLPA--KSDNVATATPSPITTRS 315
>SB_43404| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -1
Query: 510 CWYSCRSDCFRFNRYRANGQNLNRGH*RFRSDRSRLRYCDRITIYYSRQNFRSI 349
C+Y CR C+R R ++ H R + RLRY I+Y R+I
Sbjct: 217 CYYHCRRRCYRRRR-----RHFYHHHPRRYHNHRRLRYHHHRPIFYHYHRRRNI 265
>SB_37892| Best HMM Match : rve (HMM E-Value=2.1e-16)
Length = 824
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 346 TNAPEVLPAVIDSDSVAVPEPAPVTSES 429
T P VLPA SD+VA P+P+T+ S
Sbjct: 785 TTQPAVLPA--KSDNVATAAPSPITTRS 810
>SB_20579| Best HMM Match : Tymo_45kd_70kd (HMM E-Value=0.39)
Length = 721
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/84 (25%), Positives = 31/84 (36%)
Frame = +1
Query: 112 SQTLSQPRTSPPKQLSPPKEVSSRQPTLEQVESENAEAIPETVTEAIPETVTKSIEDAXX 291
S++ R S P P +S +PT+ Q ES + PE A P T + +
Sbjct: 528 SRSRPPSRASSPAAPQPEPTISQSEPTIRQSESAAKDTAPE--APAQPPTAADPVSRSTT 585
Query: 292 XXXXXXXXXXXXSQISATTNAPEV 363
S S +AP+V
Sbjct: 586 PTRPTSPPPKSTSISSLPDSAPQV 609
>SB_18313| Best HMM Match : Trans_reg_C (HMM E-Value=0.91)
Length = 567
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 154 LSPPKEVSSRQPTLEQVESENAEAIPETVTEAIPETVTKSIEDA 285
++PP V++R+PT V +A P+T+ E I TVT + DA
Sbjct: 15 VAPPPAVNNREPT---VTPPHANLSPDTL-EMIISTVTTRVTDA 54
>SB_53056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 112 SQTLSQPRTSPPKQLSPPKEVSSRQPTLEQVESENAEAIPETVTEAIPETVTKSIE 279
S L+ T P KQ+ P EVS++ P QV + E++ E + + KS++
Sbjct: 37 SSFLTDKATQPSKQVCKPSEVSAQSPM--QVVAPLQESMHNNSLEELYKKYIKSLD 90
>SB_47508| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2143
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 130 PRTSPPKQLSPPKEVSSRQPTLEQVESENAEAIPE 234
P PP + PP++V R+PT ++ + E+ + P+
Sbjct: 95 PAPPPPPPVMPPQKVIMRKPTKKKDKKESKKEGPQ 129
>SB_13016| Best HMM Match : ResIII (HMM E-Value=0.62)
Length = 450
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 491 AIASDSIATG-QTAKTSTGATRDSEVTGAGSGTATESLSIT 372
AI + SI+TG T + +T DS A GT+ + S+T
Sbjct: 395 AIPNASISTGWMTVRVTTNGMSDSRALAAIEGTSADHASVT 435
>SB_33579| Best HMM Match : Laminin_G_2 (HMM E-Value=3.2e-34)
Length = 1071
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 112 SQTLSQPRTSPPKQLSPPKEVSSRQPTLEQVESENAEAIPETVTEAIPETVTKSIE 279
S L+ T P KQ+ P EVS++ P QV + E++ E + + KS++
Sbjct: 619 SSFLTDKATQPSKQVCKPSEVSAQNPM--QVVAPLQESMHNNSLEELYKKYIKSLD 672
>SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 82 DSFDNIWAKISQTLSQPRTSPPKQLSPPKEVSSRQPTLEQ 201
+SF +W TL R K+L+ K SR+P LE+
Sbjct: 276 ESFGLLWRDDDVTLPNNRNEADKRLNSLKRKFSREPGLEE 315
>SB_52684| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 121 LSQPRTSPPKQLSPPKEVSSRQ-PTLE-QVESENAEAIPETVTEAIPETVTKSIE 279
L+ P+ SPP+ PP + +Q P ++ Q+E++N I E ++ P + + ++
Sbjct: 137 LTPPQPSPPQPPQPPPQPPDQQGPEVQSQMEADNVRYIMERMSVNHPTSRSSFVD 191
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 124 SQPRTSPPKQLSPPKEVSSRQPTLEQVE-SENAEAIPETVTEAIPE 258
SQP+ P Q++PP + P QV+ E + +P+ + + E
Sbjct: 974 SQPQPPPGNQVNPPMSSQPQPPPGNQVQLKEAVDELPDGIETELAE 1019
>SB_20145| Best HMM Match : WD40 (HMM E-Value=2.4e-09)
Length = 682
Score = 27.5 bits (58), Expect = 6.9
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +1
Query: 346 TNAPEVLPAVIDSDSVAVPEPAPVTSE 426
T E++P ++D DS+ +P P T +
Sbjct: 594 TQPKEIIPVLVDEDSIFIPVPQQDTQQ 620
>SB_11112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 118 TLSQPRTSPPKQLSPPKEVSSRQPTLEQVESENAEAIPETVTEAIPETVTKSIED 282
T+ P T+P + PP + ++ T EA E+ T +PE T+ D
Sbjct: 8 TIPLPTTTPIRTTIPPTDPATDPATGAPPTDSMIEATDESGTTVVPEEATEEDPD 62
>SB_8759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -2
Query: 236 VSGIASAFSDSTCSRVGCREETSLGGDNCLGGEV--RGW 126
+SG S T S++GC +S+ +CL GW
Sbjct: 440 LSGATSGIGSDTTSQLGCSSLSSVSSQSCLSSPTVPEGW 478
>SB_5065| Best HMM Match : Histone (HMM E-Value=2.6e-33)
Length = 330
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +1
Query: 25 DDLARRQGWEAGNIDYMGADSFDNIWAKISQTLSQPRTSPPKQLSPPKEVSSRQ-PTLEQ 201
DD+ E +D+ G + + IS P++SPPK+ P E S++ E
Sbjct: 209 DDMYTDYPLEETVVDFCGNVVGERPCSTISALEINPKSSPPKEEKPSNESDSQKADNTEH 268
Query: 202 VESENAEAIPETVTEAIPETVTKSI 276
+ A ++EAI + +I
Sbjct: 269 FFDKQAVKESAELSEAIENLIGSNI 293
>SB_50637| Best HMM Match : Drf_FH1 (HMM E-Value=1.4)
Length = 309
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +1
Query: 154 LSPPKEVSSRQPTLEQVESENAEAIPETVTEAIPETVTKSIEDA 285
++PP V++R+PT V +A P+T+ E I TVT + DA
Sbjct: 45 VAPPSAVNNREPT---VIPPHATLSPDTL-EMIISTVTTRVTDA 84
>SB_27525| Best HMM Match : PAS (HMM E-Value=0.99)
Length = 448
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 121 LSQPRTSP-PKQLSPPKEVSSRQPTLEQVESENAEAIPET 237
+ PR SP PK S P SS + T + ESE +EA+ E+
Sbjct: 275 MDTPRLSPDPKDESMP---SSEESTEDSKESEESEAVDES 311
>SB_25081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 470
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -2
Query: 497 AEAIASDSIATGQTAKTSTGATRDSEV--TGAGSGTATESLSITAGRTS 357
AEA + + T A T+T AT SE T + TAT + ++TA ++
Sbjct: 334 AEATTTATATTTTAAITTTAATTTSEAAATAEATTTATATTTVTAATST 382
>SB_24673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 1/85 (1%)
Frame = +1
Query: 25 DDLARRQGWEAGNIDYMGADSFDNIWAKISQTLSQPRTSPPKQLSPPKEVSSRQ-PTLEQ 201
DD+ E +D+ G + + IS P++SPPK+ P E S++ E
Sbjct: 209 DDMYTDYPLEETVVDFCGNVVGERPCSTISALEINPKSSPPKEEKPSNESDSQKADNTEH 268
Query: 202 VESENAEAIPETVTEAIPETVTKSI 276
+ A ++EAI + +I
Sbjct: 269 FFDKQAVKESAELSEAIENLIGSNI 293
>SB_19238| Best HMM Match : DUF729 (HMM E-Value=1.4)
Length = 647
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/73 (28%), Positives = 30/73 (41%)
Frame = +1
Query: 49 WEAGNIDYMGADSFDNIWAKISQTLSQPRTSPPKQLSPPKEVSSRQPTLEQVESENAEAI 228
W A N D G D +W K S + + PK + KEV + + + +E +
Sbjct: 364 WNAIN-DVDGPD----VWVKQSDPKKRIERTKPKAVELHKEVELKGVSSDNIERNQERNV 418
Query: 229 PETVTEAIPETVT 267
TV E TVT
Sbjct: 419 ETTVMELGLRTVT 431
>SB_18074| Best HMM Match : Trypan_PARP (HMM E-Value=0.081)
Length = 524
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +1
Query: 115 QTLSQPRTSPPKQLSPPKEVSSRQPTLEQVESENAEAIPETVTEAIPE 258
Q P P + PP ++ RQP E E PE E PE
Sbjct: 226 QEQKAPPPVPQTKRKPPAKLPPRQPVAEPEPERQPEPEPEPEQEPEPE 273
>SB_5429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +1
Query: 121 LSQPRTSPPKQLSPPKEVSSRQ-PTLE-QVESENAEAIPETVTEAIPETVTKSIE 279
L+ P+ SPP+ PP + +Q P ++ Q+E++N I E ++ P + + ++
Sbjct: 155 LTPPQPSPPQPPQPPPQPPDQQGPEVQSQMEADNVRYIMERMSVNHPTSRSSFVD 209
>SB_47409| Best HMM Match : Ldl_recept_a (HMM E-Value=1.2e-17)
Length = 1571
Score = 27.1 bits (57), Expect = 9.2
Identities = 22/99 (22%), Positives = 37/99 (37%)
Frame = +1
Query: 163 PKEVSSRQPTLEQVESENAEAIPETVTEAIPETVTKSIEDAXXXXXXXXXXXXXXSQISA 342
P SS PT + ++E + E++T + V S A
Sbjct: 880 PTVPSSAAPTEKSSDTEATVHMTESMTTRVT-IVEGSDGSAVLGTGPAVVVNATEMPAGV 938
Query: 343 TTNAPEVLPAVIDSDSVAVPEPAPVTSESLVAPVEVLAV 459
TT+ P V + D+ P P+T +V+P+ +V
Sbjct: 939 TTDQLLTSPYVTEQDTTGAPTDMPITRYQVVSPITSTSV 977
>SB_43821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 165
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1
Query: 346 TNAPEVLPAVIDSDSVAVPEPAPVTSES 429
T P VLPA SD+VA P+P+T+ S
Sbjct: 126 TIPPAVLPA--KSDNVATAAPSPITTRS 151
>SB_14256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3176
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +1
Query: 118 TLSQPRTSPPKQLSPPKEVSSRQPTLEQVESENAEAIPETVTEAIPETVT 267
T P SPPK +SP + SR T + E P VT IP ++
Sbjct: 1801 TAGMPPKSPPKLVSPQESQPSRTST-------SPERPPPLVTHTIPSVIS 1843
>SB_6916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2670
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 494 EAIASDSIATGQTAKTSTGATRDSEVTGAGSGTATESLSITAG 366
EA+ASD + G TA S + S TG G+ + SL G
Sbjct: 679 EAVASDESSCGATAAYSYPSQVKSSATGIGASDPSISLEEMLG 721
>SB_58036| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 6074
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1
Query: 84 ISSHIVNVTGFPTLTTS 34
IS I N+TG PTLTTS
Sbjct: 5753 ISYFISNITGLPTLTTS 5769
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 27.1 bits (57), Expect = 9.2
Identities = 23/115 (20%), Positives = 41/115 (35%), Gaps = 2/115 (1%)
Frame = +1
Query: 118 TLSQPRTSPPKQLSPPKEVSSRQPTL--EQVESENAEAIPETVTEAIPETVTKSIEDAXX 291
TL+ T P+ P+ + + T+ E ++ + ET A TV A
Sbjct: 2013 TLAPETTMAPETTMAPETTVAPETTVAAESTDAPDTTVAAETTASA-ETTVAPETTAAPD 2071
Query: 292 XXXXXXXXXXXXSQISATTNAPEVLPAVIDSDSVAVPEPAPVTSESLVAPVEVLA 456
+ +A T +PA D+ + +P E+ V+P + A
Sbjct: 2072 TTLVPDTTVAAETTAAAETTETTAVPATTDAPATNLPPETTAAPETTVSPETIAA 2126
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.305 0.121 0.331
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,238,699
Number of Sequences: 59808
Number of extensions: 260190
Number of successful extensions: 739
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
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