Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30240
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069750-1|AAL39895.1|  228|Drosophila melanogaster LP10861p pro...   156   2e-38
AE014296-144|AAN11453.1|  228|Drosophila melanogaster CG13887-PC...   156   2e-38
AE014296-143|AAF47419.1|  228|Drosophila melanogaster CG13887-PB...   156   2e-38
AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA ...    33   0.30 
BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p pro...    32   0.40 
AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB ...    29   4.9  
M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.         28   6.5  
M25662-1|AAA28749.1| 1938|Drosophila melanogaster protein ( D.me...    28   6.5  
AE014297-1146|AAN13470.2|  510|Drosophila melanogaster CG31147-P...    28   8.6  

>AY069750-1|AAL39895.1|  228|Drosophila melanogaster LP10861p
           protein.
          Length = 228

 Score =  156 bits (378), Expect = 2e-38
 Identities = 68/127 (53%), Positives = 94/127 (74%)
 Frame = +1

Query: 127 MSIQWTFIAGYLYFEIALVMLMILPIFSPRRWNQFFKSRLFSMFRENVAVYFYVFIGVLA 306
           MS+ WT IAG+LY EIALV+L++LP+ +P RWN+FFKS+  SM  +   +YF + +G+L 
Sbjct: 1   MSLVWTLIAGFLYAEIALVLLLVLPVLTPYRWNRFFKSKFLSMLGQQAHIYFLLIMGILV 60

Query: 307 LFLIDAVREIRKYSNVTDVSHTHLATEMKTHVKLFRAQRNFYIIGFAIFLTFVIRRLITM 486
           +FL++A+RE+RKYS +   +  HL  EM+  +KLFRAQRNFYI GFAIFL  VIRRL+ +
Sbjct: 61  IFLLEAIREMRKYSGLQQSNEVHLNVEMQHSMKLFRAQRNFYISGFAIFLALVIRRLVNL 120

Query: 487 LIIQDEL 507
           +  Q  L
Sbjct: 121 ICTQANL 127


>AE014296-144|AAN11453.1|  228|Drosophila melanogaster CG13887-PC,
           isoform C protein.
          Length = 228

 Score =  156 bits (378), Expect = 2e-38
 Identities = 68/127 (53%), Positives = 94/127 (74%)
 Frame = +1

Query: 127 MSIQWTFIAGYLYFEIALVMLMILPIFSPRRWNQFFKSRLFSMFRENVAVYFYVFIGVLA 306
           MS+ WT IAG+LY EIALV+L++LP+ +P RWN+FFKS+  SM  +   +YF + +G+L 
Sbjct: 1   MSLVWTLIAGFLYAEIALVLLLVLPVLTPYRWNRFFKSKFLSMLGQQAHIYFLLIMGILV 60

Query: 307 LFLIDAVREIRKYSNVTDVSHTHLATEMKTHVKLFRAQRNFYIIGFAIFLTFVIRRLITM 486
           +FL++A+RE+RKYS +   +  HL  EM+  +KLFRAQRNFYI GFAIFL  VIRRL+ +
Sbjct: 61  IFLLEAIREMRKYSGLQQSNEVHLNVEMQHSMKLFRAQRNFYISGFAIFLALVIRRLVNL 120

Query: 487 LIIQDEL 507
           +  Q  L
Sbjct: 121 ICTQANL 127


>AE014296-143|AAF47419.1|  228|Drosophila melanogaster CG13887-PB,
           isoform B protein.
          Length = 228

 Score =  156 bits (378), Expect = 2e-38
 Identities = 68/127 (53%), Positives = 94/127 (74%)
 Frame = +1

Query: 127 MSIQWTFIAGYLYFEIALVMLMILPIFSPRRWNQFFKSRLFSMFRENVAVYFYVFIGVLA 306
           MS+ WT IAG+LY EIALV+L++LP+ +P RWN+FFKS+  SM  +   +YF + +G+L 
Sbjct: 1   MSLVWTLIAGFLYAEIALVLLLVLPVLTPYRWNRFFKSKFLSMLGQQAHIYFLLIMGILV 60

Query: 307 LFLIDAVREIRKYSNVTDVSHTHLATEMKTHVKLFRAQRNFYIIGFAIFLTFVIRRLITM 486
           +FL++A+RE+RKYS +   +  HL  EM+  +KLFRAQRNFYI GFAIFL  VIRRL+ +
Sbjct: 61  IFLLEAIREMRKYSGLQQSNEVHLNVEMQHSMKLFRAQRNFYISGFAIFLALVIRRLVNL 120

Query: 487 LIIQDEL 507
           +  Q  L
Sbjct: 121 ICTQANL 127


>AE013599-675|AAF59067.2| 1711|Drosophila melanogaster CG8639-PA
           protein.
          Length = 1711

 Score = 32.7 bits (71), Expect = 0.30
 Identities = 11/37 (29%), Positives = 25/37 (67%)
 Frame = +1

Query: 244 LFSMFRENVAVYFYVFIGVLALFLIDAVREIRKYSNV 354
           LF+MF  N+ ++ Y+ IG+  +F++ A+  ++ ++ V
Sbjct: 758 LFTMFDGNMRIFIYISIGICVVFIVIALLTLKLFNGV 794


>BT014917-1|AAT47768.1| 1870|Drosophila melanogaster RE25258p protein.
          Length = 1870

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 11/37 (29%), Positives = 25/37 (67%)
 Frame = +1

Query: 244  LFSMFRENVAVYFYVFIGVLALFLIDAVREIRKYSNV 354
            LF+MF  N+ ++ Y+ IG+  +F++ A+  ++ ++ V
Sbjct: 917  LFTMFDGNMRIFIYISIGICVVFIVIALITLKLFNGV 953


>AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB
            protein.
          Length = 3433

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 21/85 (24%), Positives = 39/85 (45%)
 Frame = +1

Query: 238  SRLFSMFRENVAVYFYVFIGVLALFLIDAVREIRKYSNVTDVSHTHLATEMKTHVKLFRA 417
            S +F+  + ++ V  Y FIGVL L L   V ++RK+      S   L        ++  A
Sbjct: 1846 STVFTALQPDLNVVLYSFIGVLGLLLHYIVPQMRKHMPWLCFSRPLLRQREFGQFEVLNA 1905

Query: 418  QRNFYIIGFAIFLTFVIRRLITMLI 492
             +  +     I+L+ + R ++  L+
Sbjct: 1906 PKIMWFEKLYIYLSVLERNVLFPLL 1930


>M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.
          Length = 2483

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +1

Query: 238  SRLFSMFRENVAVYFYVFIGVLALFLIDAVREIRKY 345
            S +F+  + ++ V  Y FIGVL L L   V ++RK+
Sbjct: 1392 STVFTALQPDLNVVLYSFIGVLGLLLHYIVPQMRKH 1427


>M25662-1|AAA28749.1| 1938|Drosophila melanogaster protein (
           D.melanogaster pecanexgene, exons 1 (partial) and 2. ).
          Length = 1938

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +1

Query: 238 SRLFSMFRENVAVYFYVFIGVLALFLIDAVREIRKY 345
           S +F+  + ++ V  Y FIGVL L L   V ++RK+
Sbjct: 847 STVFTALQPDLNVVLYSFIGVLGLLLHYIVPQMRKH 882


>AE014297-1146|AAN13470.2|  510|Drosophila melanogaster CG31147-PA
           protein.
          Length = 510

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 14/61 (22%), Positives = 34/61 (55%)
 Frame = +1

Query: 139 WTFIAGYLYFEIALVMLMILPIFSPRRWNQFFKSRLFSMFRENVAVYFYVFIGVLALFLI 318
           +T +A +L+  ++++   +   F+ R++  F+K++  S F  N+ V+    +    +FL+
Sbjct: 299 FTVMATFLW--LSVISFDVWRRFAMRKFQVFYKNKRSSFFNYNIIVWSSAGLLTCIIFLV 356

Query: 319 D 321
           D
Sbjct: 357 D 357


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,657,034
Number of Sequences: 53049
Number of extensions: 399136
Number of successful extensions: 928
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)