Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30240
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   3.3  
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    21   5.7  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    21   5.7  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    21   5.7  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   5.7  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   7.5  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   7.5  
AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding prote...    21   7.5  
AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-bind...    21   7.5  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -1

Query: 159 IPSNEGPLYGHI*LLVFGDFLNYYL 85
           +P ++ P   H+  L+F   +++YL
Sbjct: 193 VPEDKCPFTEHLGYLIFSSTISFYL 217


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +3

Query: 369 HSFSYRNENSRQAISSPKKLLYYRL 443
           ++++Y N N ++   +  K LYY +
Sbjct: 87  NNYNYNNNNYKKLYCNNYKKLYYNI 111


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +3

Query: 369 HSFSYRNENSRQAISSPKKLLYYRL 443
           ++++Y N N ++   +  K LYY +
Sbjct: 87  NNYNYNNNNYKKLYCNNYKKLYYNI 111


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +3

Query: 369 HSFSYRNENSRQAISSPKKLLYYR 440
           ++++Y N N +   ++  K LYY+
Sbjct: 320 NNYNYNNNNYKYNYNNYNKKLYYK 343


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +3

Query: 378 SYRNENSRQAISSPKKLLYYRLCNFPDI 461
           +Y N N     ++  K LYY + N   I
Sbjct: 337 NYNNNNYNNNYNNNCKKLYYNIINIEQI 364


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +3

Query: 144 LHCWVSIFR 170
           LHCW +I++
Sbjct: 257 LHCWATIYK 265


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +3

Query: 144 LHCWVSIFR 170
           LHCW +I++
Sbjct: 257 LHCWATIYK 265


>AF393493-1|AAL60418.1|  142|Apis mellifera odorant binding protein
           ASP2 protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 462 ECQENCKAYNIEVSLGSK*LD 400
           EC EN K    E ++G+K  D
Sbjct: 114 ECIENAKGETDECNIGNKYTD 134


>AF166497-1|AAD51945.1|  142|Apis mellifera putative odorant-binding
           protein ASP2 protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 462 ECQENCKAYNIEVSLGSK*LD 400
           EC EN K    E ++G+K  D
Sbjct: 114 ECIENAKGETDECNIGNKYTD 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,701
Number of Sequences: 438
Number of extensions: 3049
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)