Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30238
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces pom... 124 6e-30
SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces ... 100 1e-22
SPCC162.04c |wtf13||wtf element Wtf13|Schizosaccharomyces pombe|... 27 2.2
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 27 2.2
SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|... 27 2.2
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 25 6.7
SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C |Schizosaccharom... 25 6.7
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 25 8.9
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 25 8.9
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 25 8.9
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 25 8.9
>SPBC725.01 |||aspartate aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 437
Score = 124 bits (300), Expect = 6e-30
Identities = 62/117 (52%), Positives = 80/117 (68%)
Frame = +2
Query: 152 WNNVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSRGL 331
W +V MGPPD I GITEAYKKD KK+NLG G YRDD GKP+VLPSVR+AE L S+ L
Sbjct: 40 WADVPMGPPDPIFGITEAYKKDGDVKKMNLGAGTYRDDAGKPYVLPSVRQAETELLSQKL 99
Query: 332 NHEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHY 502
+ EYAPI+G ++ KLA+G+ IK++ + Q++SGTGAL + F+ Y
Sbjct: 100 DKEYAPITGIPSFRVQATKLAYGDVYESIKDRL-VSAQSISGTGALCIAANFLASFY 155
>SPAC10F6.13c |||aspartate aminotransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 409
Score = 100 bits (240), Expect = 1e-22
Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 1/118 (0%)
Frame = +2
Query: 158 NVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEILHSR-GLN 334
N++ D I + Y +D PKKVN+ VGAYRDD GKP++LP+V+KA +I+ + N
Sbjct: 8 NIEEAKADAIFKLNAQYHQDEDPKKVNMSVGAYRDDTGKPWILPAVKKASKIVEEQASFN 67
Query: 335 HEYAPISGEATYTDAVAKLAFGEDSPVIKNKSNCTVQTLSGTGALRLGLEFITKHYAK 508
HEY PI+G +T A A++ F + ++ ++Q++SGTGA L FI Y K
Sbjct: 68 HEYLPIAGLPRFTKAAAEVLFRPNPHLLSEDRVASMQSVSGTGANFLAASFIETFYVK 125
>SPCC162.04c |wtf13||wtf element Wtf13|Schizosaccharomyces pombe|chr
3|||Manual
Length = 418
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 310 FFCLSDRRQNKWFSLIISICSNTKIYFFRMCVLLVC 203
F C+ D R N +LI S CS + FF +LLVC
Sbjct: 224 FGCVKDGRLNLNKALICSTCSISAALFF--ILLLVC 257
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 26.6 bits (56), Expect = 2.2
Identities = 11/24 (45%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = -3
Query: 274 FSLIISICS-NTKIYFFRMCVLLV 206
F+L+ +CS N+K++FFR VL +
Sbjct: 564 FALVDELCSLNSKLWFFRKSVLTI 587
>SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|chr
3|||Manual
Length = 402
Score = 26.6 bits (56), Expect = 2.2
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = -3
Query: 310 FFCLSDRRQNKWFSLIISICSNTKIYFFRMCVLLVC 203
F C+ D R N +LI S CS + FF +LLVC
Sbjct: 214 FGCVKDGRLNLNKALICSTCSISAALFF--ILLLVC 247
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 25.0 bits (52), Expect = 6.7
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Frame = -3
Query: 211 LVCF----CNA*DYIWR--THLNIVPPGAAGSKACTTNDRVYI 101
LVCF N D W + +N PP AG A T +D++YI
Sbjct: 215 LVCFDLNNLNTSDSRWELASVVNDPPPARAGHVAFTFSDKLYI 257
>SPBC12D12.04c |pck2|sts6, pkc1|protein kinase C
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1016
Score = 25.0 bits (52), Expect = 6.7
Identities = 14/67 (20%), Positives = 32/67 (47%)
Frame = +2
Query: 50 KMAQVLKKLTTQVLKPNNVDTIVGCTGLRASSTWWNNVQMGPPDVILGITEAYKKDTHPK 229
+++ L + KP + D +G ++ S W++ MG ++ + T K +T +
Sbjct: 325 RLSIFLPSALNNISKPESTDRPNTASGNQSVSAWFSLEPMGQINLTMNFT---KHNTRKR 381
Query: 230 KVNLGVG 250
++ G+G
Sbjct: 382 PMDAGLG 388
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 24.6 bits (51), Expect = 8.9
Identities = 13/52 (25%), Positives = 21/52 (40%)
Frame = +2
Query: 158 NVQMGPPDVILGITEAYKKDTHPKKVNLGVGAYRDDEGKPFVLPSVRKAEEI 313
N P+ + T + + V G A + G PFV+P + A +I
Sbjct: 97 NATNAQPNPTMFSTGQFSTEQGLPNVFFGAAAAQPGSGTPFVMPGIVNAAQI 148
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1
Query: 117 TIVSTLLGLSTWVVN 73
TIV LL + TW+VN
Sbjct: 846 TIVGILLAIGTWIVN 860
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 24.6 bits (51), Expect = 8.9
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 309 SSAFLTEGKTNGFPSSSLYAPTPRFTFLGCVSFLYASVM 193
+S+F T T+ PSSS + T + SFL +SV+
Sbjct: 196 TSSFSTITNTSMIPSSSSFTTTTGSPYYNTSSFLPSSVI 234
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 24.6 bits (51), Expect = 8.9
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 277 WFSLIISICSNTKIYFFRMCVLLVCFCNA*DYI 179
W S +S CS+ KI F + F N DYI
Sbjct: 412 WLSEFMSACSDCKIDFIACHWYGIDFSNLQDYI 444
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,239,423
Number of Sequences: 5004
Number of extensions: 48077
Number of successful extensions: 131
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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