Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30236
         (516 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    36   0.001
AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   4.6  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   4.6  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   4.6  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 35.5 bits (78), Expect = 0.001
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +3

Query: 186 KATPENIARAKIIIDRLEANGGTNIDAALGTAIDLIRNRSE 308
           +ATP+N+   K  I+ +E     N  AAL TA +L+R  ++
Sbjct: 327 RATPDNVKEVKTAINAVECENTANFSAALETAFELLRKYNQ 367


>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = +1

Query: 304 QSFLPIQHLPTKMKSCLWSPSSYS*RMAIRLS 399
           Q F+  QH P ++++C W  +S + R  I ++
Sbjct: 267 QKFVCHQHEPQEIRTCHWGFNSSNWRSYIHVA 298


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 267 ALGTAIDLIRNRSELFANSTSSNKDEILSLEP 362
           A+G A+ L  N S+ F +STSS   +I+   P
Sbjct: 272 AMGLAMVLDANASDYFCSSTSSVGFKIIFHSP 303


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +3

Query: 267 ALGTAIDLIRNRSELFANSTSSNKDEILSLEP 362
           A+G A+ L  N S+ F +STSS   +I+   P
Sbjct: 272 AMGLAMVLDANASDYFCSSTSSVGFKIIFHSP 303


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 525,454
Number of Sequences: 2352
Number of extensions: 10908
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46937349
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)