Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30235
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    22   2.8  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    22   3.7  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   6.5  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   6.5  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   8.6  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 296 IENGVFDVLVTGDD 337
           I+NGVF+V+ T  D
Sbjct: 39  IDNGVFEVVATSGD 52


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +2

Query: 182 RSLDAQQMQQVLDAMFEKRSEPGEYVI 262
           ++ +  ++QQ++D +  K S+P + VI
Sbjct: 113 KTSETSKLQQLVDNIEHKLSDPNQCVI 139


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +3

Query: 357 THTKVPVRLANWP*CTTCRGRHL 425
           ++ +V V+LAN    TT  G+HL
Sbjct: 329 SYPEVCVKLANPQKLTTAAGKHL 351


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/16 (62%), Positives = 10/16 (62%), Gaps = 1/16 (6%)
 Frame = +2

Query: 50  RKSVFAET-YDPEEDD 94
           R S   ET YDP EDD
Sbjct: 160 RHSEIVETVYDPREDD 175



 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/36 (19%), Positives = 16/36 (44%)
 Frame = +2

Query: 377  SFGELALMYNMPRAASVRAQTAGALWAMDRHTFRRI 484
            SF ++ ++ +            G +WA+D   F+ +
Sbjct: 2138 SFDDIGMIRHKSEFIKAMGLGGGMIWALDLDDFKNL 2173


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = -3

Query: 361 CVDHLFDAVVSGDQDVENAVLDDVE 287
           C++HLF   + GD  ++  +++ +E
Sbjct: 378 CLEHLFFFKLIGDVPIDTFLMEMLE 402


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = -3

Query: 454 PQSAGGLGPYRCRPRH 407
           P   G LG Y  RP H
Sbjct: 65  PSPRGALGAYPFRPMH 80


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 13/73 (17%), Positives = 30/73 (41%)
 Frame = -3

Query: 325 DQDVENAVLDDVEVVAVIALSDYVLAGLGSLFEHRIQNLLHLLRVKRTEQQYAPDRLSET 146
           D + +    DD   +   +++D    G G + EHR + + +++  +   Q    +     
Sbjct: 347 DNNDQGPPQDDAGNLISPSINDDGTCGNGYVCEHRWRQIFNMVGFRNAVQGTGIENWWSD 406

Query: 145 GSLCVRLGEHGRG 107
           G+  +  G   +G
Sbjct: 407 GNQQIAFGRGNKG 419


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,106
Number of Sequences: 336
Number of extensions: 2761
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)