Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30235
(516 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 61 6e-12
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 54 9e-10
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 54 9e-10
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 26 0.26
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.9
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 2.5
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 3.3
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 3.3
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 7.5
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 7.5
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 7.5
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 7.5
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 7.5
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 7.5
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 7.5
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 21 10.0
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 10.0
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 10.0
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 10.0
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 10.0
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 10.0
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 10.0
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 10.0
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 21 10.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 10.0
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 10.0
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 10.0
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 61.3 bits (142), Expect = 6e-12
Identities = 37/129 (28%), Positives = 62/129 (48%)
Frame = +2
Query: 125 KSDAQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIEN 304
K D R + A+ ++L+ Q+++ G +IR+GD G YV+E
Sbjct: 85 KRDRSRELIKAAILANDFMKNLELTQIRRDRGLHVSCSFSAGSTIIREGDVGSIVYVMEE 144
Query: 305 GVFDVLVTGDDRVEKVVHTYEGSGSFGELALMYNMPRAASVRAQTAGALWAMDRHTFRRI 484
G +V G K + T GELA++YN R A++ A T LWA+DR F+ I
Sbjct: 145 GKVEVSRDG-----KYLSTLAPGKVLGELAILYNCKRTATITAATDCQLWAIDRQCFQTI 199
Query: 485 LLKSAFKKR 511
++++ ++
Sbjct: 200 MMRTGLSRQ 208
Score = 57.6 bits (133), Expect = 7e-11
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 3/121 (2%)
Frame = +2
Query: 134 AQRARLAEAVRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVF 313
+++A + ++ + +F++L + + ++ D + E G+Y+IRQG GD F++I G
Sbjct: 206 SRQAEYTDFLKSVPIFKNLPEETLIKISDVLEETFYNNGDYIIRQGARGDTFFIISRGQV 265
Query: 314 DVLVTGDDR-VEKVVHTYEGSGSFGELALMYNMPRAASVRAQTAGAL--WAMDRHTFRRI 484
V + D EK + T FGE AL + R A++ A + +DR TF ++
Sbjct: 266 RVTIKQPDTPEEKYIRTLSKGDFFGEKALQGDDLRTANIIADDPEGVSCLVIDRETFNQL 325
Query: 485 L 487
+
Sbjct: 326 I 326
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 54.0 bits (124), Expect = 9e-10
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +2
Query: 161 VRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDR 340
V + F + D+ + V+ + + +PG+ +I++G G Y I+ G+ D+++ +
Sbjct: 451 VASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGSKMYFIQEGIVDIVMANGE- 509
Query: 341 VEKVVHTYEGSGS-FGELALMYNMPRAASVRAQTAGALWAMDRHTFRRIL 487
V T GS FGE+ L+ N R ASVRA+T L+++ F +L
Sbjct: 510 ----VATSLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNAVL 555
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 54.0 bits (124), Expect = 9e-10
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
Frame = +2
Query: 161 VRGILLFRSLDAQQMQQVLDAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFDVLVTGDDR 340
V + F + D+ + V+ + + +PG+ +I++G G Y I+ G+ D+++ +
Sbjct: 419 VASVPFFANADSNFVSDVVTKLRYEVFQPGDIIIKEGTIGSKMYFIQEGIVDIVMANGE- 477
Query: 341 VEKVVHTYEGSGS-FGELALMYNMPRAASVRAQTAGALWAMDRHTFRRIL 487
V T GS FGE+ L+ N R ASVRA+T L+++ F +L
Sbjct: 478 ----VATSLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDHFNAVL 523
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 25.8 bits (54), Expect = 0.26
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 449 ERRRSGPVQMPPAACCTSGPVRQTNRNL 366
E +S + PP C SG + +T +NL
Sbjct: 304 EMNKSKSITEPPKNCADSGSIWETGKNL 331
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 1.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 493 LEQDATERVAVHGPQSAGGLGPYRCRPRHV 404
L QD++E + GP ++GG P RP V
Sbjct: 1344 LAQDSSEDESYRGPSASGG-RPVPERPERV 1372
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +2
Query: 197 QQMQQVLDAMFEKRSEPGEYVIRQGDD 277
QQ Q+ E+R P E + G+D
Sbjct: 168 QQQQRQQQRQEERRLRPDEIKVEVGED 194
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/24 (37%), Positives = 10/24 (41%)
Frame = -3
Query: 430 PYRCRPRHVVHQGQFAKRTGTFVC 359
P CRPRH + T VC
Sbjct: 519 PSACRPRHEIRSTDVIPGTQEHVC 542
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 22.2 bits (45), Expect = 3.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 473 TCGGPWPTERRRSGPVQMPPAACCT 399
TCG PW T R P + A C T
Sbjct: 138 TCGNPWNT-RYCLTPTERLEALCWT 161
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 22.2 bits (45), Expect = 3.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 473 TCGGPWPTERRRSGPVQMPPAACCT 399
TCG PW T R P + A C T
Sbjct: 191 TCGNPWNT-RYCLTPTERLEALCWT 214
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 343 DAVVSGDQDVENAVLDDVE 287
DA++SG+ D +N D++
Sbjct: 52 DAILSGEYDYKNNYPSDID 70
Score = 20.6 bits (41), Expect = 10.0
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 218 DAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFD 316
D M E GE +I + D+F+ + + FD
Sbjct: 200 DTMVYIADEKGEGLIVYHNSDDSFHRLTSNTFD 232
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 426 YGPRPPALCGPW 461
YG PP GPW
Sbjct: 123 YGNFPPRSMGPW 134
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 426 YGPRPPALCGPW 461
YG PP GPW
Sbjct: 123 YGNFPPRSMGPW 134
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 426 YGPRPPALCGPW 461
YG PP GPW
Sbjct: 123 YGNFPPRSMGPW 134
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 426 YGPRPPALCGPW 461
YG PP GPW
Sbjct: 356 YGNFPPRSMGPW 367
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 343 DAVVSGDQDVENAVLDDVE 287
DA++SG+ D +N D++
Sbjct: 52 DAILSGEYDYKNNYPSDID 70
Score = 20.6 bits (41), Expect = 10.0
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 218 DAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFD 316
D M E GE +I + D+F+ + + FD
Sbjct: 200 DTMVYIADEKGEGLIVYHNSDDSFHRLTSNTFD 232
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -3
Query: 343 DAVVSGDQDVENAVLDDVE 287
DA++SG+ D +N D++
Sbjct: 52 DAILSGEYDYKNNYPSDID 70
Score = 20.6 bits (41), Expect = 10.0
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = +2
Query: 218 DAMFEKRSEPGEYVIRQGDDGDNFYVIENGVFD 316
D M E GE +I + D+F+ + + FD
Sbjct: 200 DTMVYIADEKGEGLIVYHNSDDSFHRLTSNTFD 232
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 20.6 bits (41), Expect = 10.0
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -1
Query: 285 LSPSSPCLITYSPGSDLFSNIASRTCCICCASRERNSSMPRTASARRA 142
LS S+P + PG+ + + S+ + S SS TAS+R +
Sbjct: 146 LSSSAPTGSSCGPGAAAAAALLSKRRSVSECSLGTASSTSSTASSRNS 193
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 426 YGPRPPALCGPW 461
YG PP GPW
Sbjct: 135 YGNFPPRPMGPW 146
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 426 YGPRPPALCGPW 461
YG PP GPW
Sbjct: 135 YGNFPPRPMGPW 146
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 426 YGPRPPALCGPW 461
YG PP GPW
Sbjct: 135 YGNFPPRPMGPW 146
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 426 YGPRPPALCGPW 461
YG PP GPW
Sbjct: 125 YGNFPPRPMGPW 136
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 426 YGPRPPALCGPW 461
YG PP GPW
Sbjct: 130 YGNFPPRPMGPW 141
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 426 YGPRPPALCGPW 461
YG PP GPW
Sbjct: 130 YGNFPPRPMGPW 141
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 426 YGPRPPALCGPW 461
YG PP GPW
Sbjct: 130 YGNFPPRPMGPW 141
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +2
Query: 224 MFEKRSEPGEYVIRQGDDGDNFYVIENGVF 313
MF GE+++ D GD+ +V G +
Sbjct: 153 MFTVNKYVGEHLLMTVDAGDSMFVHTFGAY 182
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 20.6 bits (41), Expect = 10.0
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 127 VGRTESPSR*GGPGH 171
+ R E+PSR G GH
Sbjct: 1917 IERNEAPSRQTGSGH 1931
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 426 YGPRPPALCGPW 461
YG PP GPW
Sbjct: 360 YGNFPPRPMGPW 371
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.6 bits (41), Expect = 10.0
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +3
Query: 426 YGPRPPALCGPW 461
YG PP GPW
Sbjct: 346 YGNFPPRPMGPW 357
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,744
Number of Sequences: 438
Number of extensions: 3125
Number of successful extensions: 33
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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