Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30234
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   4.9  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.6  

>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +3

Query: 18  ILIHYKEYVV*GTLRRW 68
           ILI Y+E +V G L+ W
Sbjct: 157 ILIFYEEKIVKGKLQCW 173


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 346 YFIYFTLYMFLGILLLTKSQIK 281
           + +YF L+  L ILL   +Q+K
Sbjct: 144 FILYFLLFATLKILLGKYTQLK 165


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 346 YFIYFTLYMFLGILLLTKSQIK 281
           + +YF L+  L ILL   +Q+K
Sbjct: 144 FILYFLLFATLKILLGKYTQLK 165


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -3

Query: 346 YFIYFTLYMFLGILLLTKSQIK 281
           + +YF L+  L ILL   +Q+K
Sbjct: 464 FILYFLLFATLKILLGKYTQLK 485


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,313
Number of Sequences: 336
Number of extensions: 3441
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)