Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30234
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   1.9  
DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              22   3.3  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   10.0 

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = +3

Query: 306 KIPRNMYNVK*MKYAQRHDLLPWAVPYT-LSPSYFYIRRY 422
           ++P   Y +K +  + R   L WA PY   SP   Y+  Y
Sbjct: 874 EVPEVPYGLKVLDKSGRSVQLSWAAPYDGNSPIKRYVIEY 913


>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/26 (30%), Positives = 20/26 (76%)
 Frame = +3

Query: 159 LHRE*VWLSNEAT*PVSWELCLLQAL 236
           +HR+ + +++E    +S++LC+L+A+
Sbjct: 121 VHRKFLHVNDECDVALSFKLCMLKAM 146


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 454 VNQKTQEYYDLRNALSKRV 510
           VN++ Q ++DLR AL+  +
Sbjct: 149 VNEQGQTWHDLRVALTSEL 167


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,716
Number of Sequences: 438
Number of extensions: 3642
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)