Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30220
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1512 + 27627740-27629009,27629111-27629256,27629842-276301...    30   0.96 
10_08_0368 + 17241156-17241308,17243745-17243993,17244104-172442...    28   5.1  
02_03_0300 + 17454622-17455402,17455535-17456977,17457015-174573...    27   8.9  

>08_02_1512 +
           27627740-27629009,27629111-27629256,27629842-27630101,
           27630346-27630412,27630511-27630545,27630818-27631587,
           27631633-27631793
          Length = 902

 Score = 30.3 bits (65), Expect = 0.96
 Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
 Frame = -3

Query: 364 ISRTETIIILCYN*NCSIFLELVFRGVVHH--ERTECHIYKIHLKIHVLNLYKTFVWTDI 191
           +S+TE  + + YN        L  RG   H  E TE HI K+  KI +       +  +I
Sbjct: 482 LSQTEEKMRVLYNQKREELKVLYGRGAEAHKLEATETHIRKLSTKISIAIQIVNTISKNI 541

Query: 190 CKLSDTILSNDECEIIGRNELICT 119
             L D  L    CE+I +  L+ T
Sbjct: 542 NNLRDDELWPQTCELI-QGHLVIT 564


>10_08_0368 +
           17241156-17241308,17243745-17243993,17244104-17244206,
           17244291-17244390,17244556-17244666,17245302-17245407,
           17245550-17245640,17245951-17246092,17246370-17246517,
           17246597-17246706,17247131-17247287,17247439-17247564,
           17247646-17247786
          Length = 578

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = -3

Query: 193 ICKLSDTILSNDECEIIGRNELICTILFNLYNVLLTFN*F 74
           +C++ D I   +EC    R+   C +  N++N+L   N F
Sbjct: 480 LCQMIDMIGPENECYFTLRDLKRCKLSGNIFNILFNLNKF 519


>02_03_0300 + 17454622-17455402,17455535-17456977,17457015-17457317,
            17458429-17458519,17458623-17459757,17459998-17460077,
            17460449-17460533,17460614-17460705,17461079-17461147,
            17461227-17461263,17461351-17461433,17461695-17461840,
            17461868-17462138,17462245-17462281,17462428-17462721
          Length = 1648

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
 Frame = -3

Query: 241  LKIHVLNLY------KTFVWTDICKLSDTILSNDECEIIGRNELICT 119
            L++H+L LY      + ++W  +CKL   IL     ++I   ++ C+
Sbjct: 1330 LQLHLLELYPLLEHIQKYIWPRLCKLDQLILYELHYQMITFGKVFCS 1376


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,091,325
Number of Sequences: 37544
Number of extensions: 194994
Number of successful extensions: 344
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 344
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)