Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30220
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40951-1|AAG01567.2|  177|Caenorhabditis elegans Hypothetical pr...    30   0.85 
U41019-1|AAM51510.1|  542|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AC084197-45|AAK68589.4|  751|Caenorhabditis elegans Hypothetical...    27   8.0  

>U40951-1|AAG01567.2|  177|Caenorhabditis elegans Hypothetical
           protein ZK721.4 protein.
          Length = 177

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
 Frame = -3

Query: 313 IFLELVFRGVVHHERTECHIY------KIHLKIHVLNLYKTFVWTDICKLSDTILSNDEC 152
           + L L    V+H   T CH Y      ++H+    + L+    WT    ++ T +S    
Sbjct: 52  LMLNLAIADVIHGFVTTCHFYPPILLKQMHIGEMAVRLFNIADWT-AWAITLTHMS---- 106

Query: 151 EIIGRNELICTILFNLYNVLLTFN*FKT 68
             I  + LI  IL+  YNVL+T    KT
Sbjct: 107 -AICLDRLIAIILYGRYNVLVTVQRIKT 133


>U41019-1|AAM51510.1|  542|Caenorhabditis elegans Hypothetical
           protein C04E7.4 protein.
          Length = 542

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -1

Query: 468 FENTFKFVSFLSWKNSLKMLVNTYKDGKADETYDP 364
           FE T   V    W +   + + T   GKA   YDP
Sbjct: 279 FEETCPPVKKFKWNDGHSLKIVTISQGKASSLYDP 313


>AC084197-45|AAK68589.4|  751|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.1 protein.
          Length = 751

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 14/53 (26%), Positives = 23/53 (43%)
 Frame = +1

Query: 175 YRLVYRCPSTRMFCKGLIHVFLNEFYKCDTRSAHDVLLHGIQVPKICYNSNCS 333
           Y+ V  C      C    +    + ++C +R  +     G +  +ICYNS CS
Sbjct: 365 YQPVRHCSEQDATCDSPFYWCDMKLWRCRSRVVYGGNCTGYEGTQICYNSVCS 417


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,836,229
Number of Sequences: 27780
Number of extensions: 217823
Number of successful extensions: 511
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)