Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30218
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   0.70 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.1  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   2.8  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   6.5  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   6.5  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
 Frame = +2

Query: 209 KLTKDNYRIYILKVYNDDFDASLVLDYYKYI--VVVSEYLKIH 331
           K  K+N ++Y+ +V+  D    L+ +Y  +I  VV SE L ++
Sbjct: 344 KKRKNNIKLYVRRVFIMDNCEELIPEYLNFIKGVVDSEDLPLN 386


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 449 YGMRIKGVYIISPSKT 496
           + + IKGVY ++P+KT
Sbjct: 358 FELLIKGVYQVNPTKT 373


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = +2

Query: 374 VNVMNFVT-KFNPVILRQAVTLITDGYGMRI 463
           +N  N  T KFN  +L QAV    D +G  I
Sbjct: 185 INESNVETVKFNLFLLSQAVETFNDIFGWTI 215


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 379 CHEFCHKIQSC 411
           C  FCH+  SC
Sbjct: 12  CDNFCHRYISC 22


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 379 CHEFCHKIQSC 411
           C  FCH+  SC
Sbjct: 168 CDNFCHRYISC 178


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,289
Number of Sequences: 336
Number of extensions: 2687
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)