Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30218
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of a... 34 0.069
AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein. 34 0.069
AL110477-2|CAB54338.1| 319|Caenorhabditis elegans Hypothetical ... 31 0.65
U80023-4|AAG24038.1| 318|Caenorhabditis elegans Serpentine rece... 30 0.85
Z82262-7|CAB54195.2| 218|Caenorhabditis elegans Hypothetical pr... 29 2.6
AF003134-4|AAB54145.2| 395|Caenorhabditis elegans Hypothetical ... 29 2.6
U40415-1|AAK39255.4| 445|Caenorhabditis elegans Hypothetical pr... 28 3.4
AL132863-2|CAB60569.1| 317|Caenorhabditis elegans Hypothetical ... 28 4.6
AC006723-1|AAF59429.3| 534|Caenorhabditis elegans Hypothetical ... 28 4.6
>U41625-5|AAA83327.1| 700|Caenorhabditis elegans Suppressor of
activated let-60ras protein 5 protein.
Length = 700
Score = 33.9 bits (74), Expect = 0.069
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Frame = +2
Query: 110 NLCTFKTLMPNFFEDIDVKKFAFSTVFSHAHMPKLTKDNYRIYILKVYNDDFDASLVLDY 289
NL TF+ + N FE+ KKFA + + T DNY I+ + D S V +
Sbjct: 53 NLETFELSLRNHFEEKTNKKFA-----DYREFHRFTCDNYGIF----WEDLLKLSDVKLH 103
Query: 290 YKYIVVVSEYLKIHDYCKGFE-VILDYSDVNVMNFVTKFNPVILRQAV--TLITDGYGMR 460
Y V+ LKI++ + F L+Y++ NV+ T + +L ++ T+ Y
Sbjct: 104 QNYNQVIDHNLKINERPRWFNGATLNYTE-NVIERGTATDIAVLNASIEETVTEYTYDNL 162
Query: 461 IKGVYIISPS 490
K VY I+ S
Sbjct: 163 RKDVYRIATS 172
>AY091467-1|AAM44123.1| 700|Caenorhabditis elegans SUR-5 protein.
Length = 700
Score = 33.9 bits (74), Expect = 0.069
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Frame = +2
Query: 110 NLCTFKTLMPNFFEDIDVKKFAFSTVFSHAHMPKLTKDNYRIYILKVYNDDFDASLVLDY 289
NL TF+ + N FE+ KKFA + + T DNY I+ + D S V +
Sbjct: 53 NLETFELSLRNHFEEKTNKKFA-----DYREFHRFTCDNYGIF----WEDLLKLSDVKLH 103
Query: 290 YKYIVVVSEYLKIHDYCKGFE-VILDYSDVNVMNFVTKFNPVILRQAV--TLITDGYGMR 460
Y V+ LKI++ + F L+Y++ NV+ T + +L ++ T+ Y
Sbjct: 104 QNYNQVIDHNLKINERPRWFNGATLNYTE-NVIERGTATDIAVLNASIEETVTEYTYDNL 162
Query: 461 IKGVYIISPS 490
K VY I+ S
Sbjct: 163 RKDVYRIATS 172
>AL110477-2|CAB54338.1| 319|Caenorhabditis elegans Hypothetical
protein Y113G7B.3 protein.
Length = 319
Score = 30.7 bits (66), Expect = 0.65
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +2
Query: 245 KVYNDDFDASLVLDYYKYIVVVSEYLKIHDYCKGFEVILDYSDV--NVMNFVTKFNPVIL 418
K+ D+F S DY I ++ E + D + +VILD + + + ++ F P IL
Sbjct: 124 KLRLDEFKLSAGWDYMMTINLLKEIKDVEDMFQAKKVILDVFEFCRDAFSILSHFEPGIL 183
Query: 419 RQAVTLITDGYG 454
+ +D YG
Sbjct: 184 EEIGIFCSDVYG 195
>U80023-4|AAG24038.1| 318|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 25 protein.
Length = 318
Score = 30.3 bits (65), Expect = 0.85
Identities = 30/102 (29%), Positives = 46/102 (45%)
Frame = +2
Query: 20 FLKKDFSREYLERTLITTKGLVERAKTRIDNLCTFKTLMPNFFEDIDVKKFAFSTVFSHA 199
F++K S+ + ++I T + + R+ + TFK ++P+F F TVF A
Sbjct: 195 FIRKSLSKFARKMSVIKTNE--KNLRNRLVKVATFKLILPSFI-------FLGITVFV-A 244
Query: 200 HMPKLTKDNYRIYILKVYNDDFDASLVLDYYKYIVVVSEYLK 325
+L Y YI+ V F S V Y YI+ V Y K
Sbjct: 245 MFTRLLDYQYGQYIVSVC---FMFSPVCSPYAYIIFVPHYRK 283
>Z82262-7|CAB54195.2| 218|Caenorhabditis elegans Hypothetical
protein C43F9.8 protein.
Length = 218
Score = 28.7 bits (61), Expect = 2.6
Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
Frame = +2
Query: 68 TTKGLVERAKTRIDNLCTFKTLMPNFF-----EDIDVKKFAFSTVFSHAHMPKLTKDNYR 232
T+ G +E + D LCT K + F I+ KFA T+ T Y
Sbjct: 126 TSDGTLEGIDRKKDGLCTAKQMKIKFEVGQDRRGIENPKFAARTLKKDRDAEHSTPVMYV 185
Query: 233 IYILKVYNDDFDASLVLDYYKYIVVV--SEYL 322
++ +DD D S Y+ IVV+ S YL
Sbjct: 186 VHDESDIDDDDDGSNACSYFVSIVVLLASRYL 217
>AF003134-4|AAB54145.2| 395|Caenorhabditis elegans Hypothetical
protein ZC581.7 protein.
Length = 395
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/57 (26%), Positives = 29/57 (50%)
Frame = +2
Query: 149 EDIDVKKFAFSTVFSHAHMPKLTKDNYRIYILKVYNDDFDASLVLDYYKYIVVVSEY 319
+D+D KK S + ++ +LTK+N +I + K+ + D + + K V+ Y
Sbjct: 118 KDVDFKKKLGSGAYGTVYLGRLTKNNTKIAVKKLDTEGNDEESLAEMMKEARVMQLY 174
>U40415-1|AAK39255.4| 445|Caenorhabditis elegans Hypothetical
protein K02G10.3 protein.
Length = 445
Score = 28.3 bits (60), Expect = 3.4
Identities = 21/69 (30%), Positives = 34/69 (49%)
Frame = -1
Query: 207 GICACEKTVENANFLTSMSSKKFGISVLNVHKLSIRVLARSTRPFVVISVRSRYSLLKSF 28
G+ KT + +T++ SK+ + +N K I V S F+V ++ + +L
Sbjct: 42 GLIFSLKTYASFYLITNVVSKRGRLDKINWKKFGIDVCQSSL--FLVTNM-CFFLILLCK 98
Query: 27 FRKWFCFFT 1
FRKW FFT
Sbjct: 99 FRKWLGFFT 107
>AL132863-2|CAB60569.1| 317|Caenorhabditis elegans Hypothetical
protein Y37H2A.4 protein.
Length = 317
Score = 27.9 bits (59), Expect = 4.6
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +2
Query: 230 RIYILKVYNDDFDASLVLDYYKYIVVVSEYLKIHDYCKGFEVILDYSDVNVMNFVTKFNP 409
R +Y D D ++++K I K+ ++IL SD N+ ++ F P
Sbjct: 131 RFIFSTIYEDTEDVETAMNWFKSISDSGNLWKVG------KIILRTSDCNIPRILSSFQP 184
Query: 410 VILR 421
+LR
Sbjct: 185 AVLR 188
>AC006723-1|AAF59429.3| 534|Caenorhabditis elegans Hypothetical
protein Y19D10B.2 protein.
Length = 534
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 98 TRIDNLCTFKTLMPNFFEDIDV 163
T +NLCTF + P F D++V
Sbjct: 457 TTSENLCTFPEICPKIFGDVEV 478
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,214,003
Number of Sequences: 27780
Number of extensions: 257160
Number of successful extensions: 648
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 648
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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