Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30216
         (505 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    23   1.2  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    23   1.6  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   4.7  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   6.3  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   6.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   6.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   6.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.3  

>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/13 (69%), Positives = 12/13 (92%)
 Frame = +3

Query: 87  KYADQLIAEGVVT 125
           KYAD+L AEG+V+
Sbjct: 115 KYADELKAEGIVS 127


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +3

Query: 87  KYADQLIAEGVV 122
           KYAD+L AEG+V
Sbjct: 115 KYADELKAEGIV 126


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = +2

Query: 263 PPKDVGHRCSGGDPRAHRASVLIPPSQRRGVR 358
           PP   G   SGG P         PP  R  +R
Sbjct: 61  PPHHYGGPPSGGQPPQGMPYPRFPPYDRMDIR 92


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 12/37 (32%), Positives = 19/37 (51%)
 Frame = +3

Query: 357 EIHKGLLRILKSRMEMVDNRTVDWALAEAMAYGSLLK 467
           E H+G +  L++R    DN  +D  +   M   SLL+
Sbjct: 131 EKHQGAVCHLETRPNQSDNNQLDALVKVEMTRVSLLQ 167


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +3

Query: 360 IHKGLLRILKSRMEMVDNRTVDWALAEAM 446
           +HK L+R+ KS  ++   + + W L   M
Sbjct: 84  LHKTLVRVAKSLNQVFAPQLLLWVLLGVM 112


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 229 SSQSLYLMWVSCLAW 185
           SS  +Y  W+S L+W
Sbjct: 579 SSIPIYFKWLSFLSW 593


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 229 SSQSLYLMWVSCLAW 185
           SS  +Y  W+S L+W
Sbjct: 579 SSIPIYFKWLSFLSW 593


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -2

Query: 402 SPCATSGYEAAPCGSRTPRRWEG 334
           SPC  S   A+   S TPR   G
Sbjct: 929 SPCRNSASPASSDRSGTPRSTNG 951


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,882
Number of Sequences: 336
Number of extensions: 2186
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11944578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)