Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30216
(505 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical ... 184 4e-47
Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical pr... 88 4e-18
Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical p... 88 4e-18
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 2.5
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 2.5
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 2.5
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 2.5
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 28 3.3
AF104858-1|AAC79090.1| 390|Caenorhabditis elegans putative RNA-... 28 3.3
AF063007-5|AAD47125.1| 712|Caenorhabditis elegans Prion-like-(q... 28 3.3
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 28 3.3
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z81485-6|CAB03979.1| 784|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical pr... 27 7.7
AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative acti... 27 7.7
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 27 7.7
>AF039040-6|AAB94185.2| 1029|Caenorhabditis elegans Hypothetical
protein T22B11.5 protein.
Length = 1029
Score = 184 bits (447), Expect = 4e-47
Identities = 83/165 (50%), Positives = 115/165 (69%)
Frame = +3
Query: 9 HNEVDEPMFTQPLMYQKIRKTKPVLEKYADQLIAEGVVTAXXXXXXXXXXXXICEDAYNQ 188
HNE+DEPMFTQPLMYQ+I++TK LEKY ++++ EGV I EDAY
Sbjct: 517 HNELDEPMFTQPLMYQRIKQTKTALEKYQEKILNEGVANEQYVKEELTKYGSILEDAYEN 576
Query: 189 AKQETHIKYKDWLDSPWSGFFEGKDPLKMSATGVVEETLVHIGRRFSSPPPNAAEFEIHK 368
A++ T+++ +DWLDSPW FF+ +DPLK+ +TG+ +E + I +FS P F +H+
Sbjct: 577 AQKVTYVRNRDWLDSPWDDFFKKRDPLKLPSTGIEQENIEQIIGKFSQYPEG---FNLHR 633
Query: 369 GLLRILKSRMEMVDNRTVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
GL R LK R +M+ + ++DWA EA+A+GSLLKEGIHVRLSG+DV
Sbjct: 634 GLERTLKGRQQMLKDNSLDWACGEALAFGSLLKEGIHVRLSGQDV 678
>Z78201-4|CAB01590.2| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 87.8 bits (208), Expect = 4e-18
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 3/168 (1%)
Frame = +3
Query: 9 HNEVDEPMFTQPLMYQKIRKTKPVLEKYADQLIAEGVVTAXXXXXXXXXXXXICEDAYNQ 188
HNE+D+P FT P+MY+++ + V + D+L+ EG T E N+
Sbjct: 425 HNELDDPTFTSPVMYKEVEARESVPRLFLDRLVEEGFTTEEAVKEQLQKHT---EQLNNE 481
Query: 189 AKQ-ETHIKYKDWLDSPWSGFFEGKDPLKMSATGVVEETLVHIGRRFSSPPPNAAEFEIH 365
K+ ++ + W GF + ++ TGV + L IG P +F+ H
Sbjct: 482 LKKVDSTVPIDISHRGRWEGFKQAPKAIESWDTGVATDLLRFIGAGSVKVPE---DFDTH 538
Query: 366 KGLLRI-LKSRME-MVDNRTVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
K L ++ + SRM+ M +DWA AEAMA+GS+L EG VR+SG+DV
Sbjct: 539 KHLYKMHIDSRMQKMQTGEGIDWATAEAMAFGSILLEGNDVRISGQDV 586
>Z78019-10|CAE46691.1| 911|Caenorhabditis elegans Hypothetical
protein ZK836.2 protein.
Length = 911
Score = 87.8 bits (208), Expect = 4e-18
Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 3/168 (1%)
Frame = +3
Query: 9 HNEVDEPMFTQPLMYQKIRKTKPVLEKYADQLIAEGVVTAXXXXXXXXXXXXICEDAYNQ 188
HNE+D+P FT P+MY+++ + V + D+L+ EG T E N+
Sbjct: 425 HNELDDPTFTSPVMYKEVEARESVPRLFLDRLVEEGFTTEEAVKEQLQKHT---EQLNNE 481
Query: 189 AKQ-ETHIKYKDWLDSPWSGFFEGKDPLKMSATGVVEETLVHIGRRFSSPPPNAAEFEIH 365
K+ ++ + W GF + ++ TGV + L IG P +F+ H
Sbjct: 482 LKKVDSTVPIDISHRGRWEGFKQAPKAIESWDTGVATDLLRFIGAGSVKVPE---DFDTH 538
Query: 366 KGLLRI-LKSRME-MVDNRTVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
K L ++ + SRM+ M +DWA AEAMA+GS+L EG VR+SG+DV
Sbjct: 539 KHLYKMHIDSRMQKMQTGEGIDWATAEAMAFGSILLEGNDVRISGQDV 586
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 255 GKDPLKMSAT-GVVEETLVHIGRRFSSPPPNAAEFEIHKGL-LRILKSRMEMV----DNR 416
G LK +A+ G+V+ TL + + P +I +G+ LRI+ + V DN+
Sbjct: 2826 GSVDLKTAASQGLVDVTLSEVLPKGIIHPGTGERIDIKRGIELRIIDAATGKVRDPRDNK 2885
Query: 417 TVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
T+ W Y ++ EG+ G V
Sbjct: 2886 TITWIDILKPVYQAIASEGVFDPTKGHHV 2914
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 255 GKDPLKMSAT-GVVEETLVHIGRRFSSPPPNAAEFEIHKGL-LRILKSRMEMV----DNR 416
G LK +A+ G+V+ TL + + P +I +G+ LRI+ + V DN+
Sbjct: 2838 GSVDLKTAASQGLVDVTLSEVLPKGIIHPGTGERIDIKRGIELRIIDAATGKVRDPRDNK 2897
Query: 417 TVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
T+ W Y ++ EG+ G V
Sbjct: 2898 TITWIDILKPVYQAIASEGVFDPTKGHHV 2926
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 255 GKDPLKMSAT-GVVEETLVHIGRRFSSPPPNAAEFEIHKGL-LRILKSRMEMV----DNR 416
G LK +A+ G+V+ TL + + P +I +G+ LRI+ + V DN+
Sbjct: 2724 GSVDLKTAASQGLVDVTLSEVLPKGIIHPGTGERIDIKRGIELRIIDAATGKVRDPRDNK 2783
Query: 417 TVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
T+ W Y ++ EG+ G V
Sbjct: 2784 TITWIDILKPVYQAIASEGVFDPTKGHHV 2812
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 255 GKDPLKMSAT-GVVEETLVHIGRRFSSPPPNAAEFEIHKGL-LRILKSRMEMV----DNR 416
G LK +A+ G+V+ TL + + P +I +G+ LRI+ + V DN+
Sbjct: 2725 GSVDLKTAASQGLVDVTLSEVLPKGIIHPGTGERIDIKRGIELRIIDAATGKVRDPRDNK 2784
Query: 417 TVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
T+ W Y ++ EG+ G V
Sbjct: 2785 TITWIDILKPVYQAIASEGVFDPTKGHHV 2813
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 255 GKDPLKMSAT-GVVEETLVHIGRRFSSPPPNAAEFEIHKGL-LRILKSRMEMV----DNR 416
G LK +A+ G+V+ TL + + P +I +G+ LRI+ + V DN+
Sbjct: 2807 GSVDLKTAASQGLVDVTLSEVLPKGIIHPGTGERIDIKRGIELRIIDAATGKVRDPRDNK 2866
Query: 417 TVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
T+ W Y ++ EG+ G V
Sbjct: 2867 TITWIDILKPVYQAIASEGVFDPTKGHHV 2895
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 255 GKDPLKMSAT-GVVEETLVHIGRRFSSPPPNAAEFEIHKGL-LRILKSRMEMV----DNR 416
G LK +A+ G+V+ TL + + P +I +G+ LRI+ + V DN+
Sbjct: 2826 GSVDLKTAASQGLVDVTLSEVLPKGIIHPGTGERIDIKRGIELRIIDAATGKVRDPRDNK 2885
Query: 417 TVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
T+ W Y ++ EG+ G V
Sbjct: 2886 TITWIDILKPVYQAIASEGVFDPTKGHHV 2914
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 255 GKDPLKMSAT-GVVEETLVHIGRRFSSPPPNAAEFEIHKGL-LRILKSRMEMV----DNR 416
G LK +A+ G+V+ TL + + P +I +G+ LRI+ + V DN+
Sbjct: 2838 GSVDLKTAASQGLVDVTLSEVLPKGIIHPGTGERIDIKRGIELRIIDAATGKVRDPRDNK 2897
Query: 417 TVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
T+ W Y ++ EG+ G V
Sbjct: 2898 TITWIDILKPVYQAIASEGVFDPTKGHHV 2926
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 255 GKDPLKMSAT-GVVEETLVHIGRRFSSPPPNAAEFEIHKGL-LRILKSRMEMV----DNR 416
G LK +A+ G+V+ TL + + P +I +G+ LRI+ + V DN+
Sbjct: 2724 GSVDLKTAASQGLVDVTLSEVLPKGIIHPGTGERIDIKRGIELRIIDAATGKVRDPRDNK 2783
Query: 417 TVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
T+ W Y ++ EG+ G V
Sbjct: 2784 TITWIDILKPVYQAIASEGVFDPTKGHHV 2812
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 255 GKDPLKMSAT-GVVEETLVHIGRRFSSPPPNAAEFEIHKGL-LRILKSRMEMV----DNR 416
G LK +A+ G+V+ TL + + P +I +G+ LRI+ + V DN+
Sbjct: 2725 GSVDLKTAASQGLVDVTLSEVLPKGIIHPGTGERIDIKRGIELRIIDAATGKVRDPRDNK 2784
Query: 417 TVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
T+ W Y ++ EG+ G V
Sbjct: 2785 TITWIDILKPVYQAIASEGVFDPTKGHHV 2813
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 255 GKDPLKMSAT-GVVEETLVHIGRRFSSPPPNAAEFEIHKGL-LRILKSRMEMV----DNR 416
G LK +A+ G+V+ TL + + P +I +G+ LRI+ + V DN+
Sbjct: 2807 GSVDLKTAASQGLVDVTLSEVLPKGIIHPGTGERIDIKRGIELRIIDAATGKVRDPRDNK 2866
Query: 417 TVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
T+ W Y ++ EG+ G V
Sbjct: 2867 TITWIDILKPVYQAIASEGVFDPTKGHHV 2895
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 255 GKDPLKMSAT-GVVEETLVHIGRRFSSPPPNAAEFEIHKGL-LRILKSRMEMV----DNR 416
G LK +A+ G+V+ TL + + P +I +G+ LRI+ + V DN+
Sbjct: 2838 GSVDLKTAASQGLVDVTLSEVLPKGIIHPGTGERIDIKRGIELRIIDAATGKVRDPRDNK 2897
Query: 417 TVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
T+ W Y ++ EG+ G V
Sbjct: 2898 TITWIDILKPVYQAIASEGVFDPTKGHHV 2926
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 255 GKDPLKMSAT-GVVEETLVHIGRRFSSPPPNAAEFEIHKGL-LRILKSRMEMV----DNR 416
G LK +A+ G+V+ TL + + P +I +G+ LRI+ + V DN+
Sbjct: 2838 GSVDLKTAASQGLVDVTLSEVLPKGIIHPGTGERIDIKRGIELRIIDAATGKVRDPRDNK 2897
Query: 417 TVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
T+ W Y ++ EG+ G V
Sbjct: 2898 TITWIDILKPVYQAIASEGVFDPTKGHHV 2926
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 2.5
Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Frame = +3
Query: 255 GKDPLKMSAT-GVVEETLVHIGRRFSSPPPNAAEFEIHKGL-LRILKSRMEMV----DNR 416
G LK +A+ G+V+ TL + + P +I +G+ LRI+ + V DN+
Sbjct: 2838 GSVDLKTAASQGLVDVTLSEVLPKGIIHPGTGERIDIKRGIELRIIDAATGKVRDPRDNK 2897
Query: 417 TVDWALAEAMAYGSLLKEGIHVRLSGEDV 503
T+ W Y ++ EG+ G V
Sbjct: 2898 TITWIDILKPVYQAIASEGVFDPTKGHHV 2926
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 335 PSQRRGVRDPQGAASYPEVAHGDGRQPYSGLGARGGDGLRISAQGGHP 478
P G DP G G G+ PY G + G G QGG P
Sbjct: 24 PGYGNGSYDPYGQPQQQPYPGGGGQPPYPGSNSNQGGG-GYPGQGGAP 70
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +2
Query: 335 PSQRRGVRDPQGAASYPEVAHGDGRQPYSGLGARGGDGLRISAQGGHP 478
P G DP G G G+ PY G + G G QGG P
Sbjct: 66 PGYGNGSYDPYGQPQQQPYPGGGGQPPYPGSNSNQGGG-GYPGQGGAP 112
>AF104858-1|AAC79090.1| 390|Caenorhabditis elegans putative
RNA-binding protein PRP-1 protein.
Length = 390
Score = 28.3 bits (60), Expect = 3.3
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +2
Query: 293 GGDPRAHRASVLIPPSQRRGVRDPQGAASYPEVAHGDGRQPYSGLGARGGDGLRISAQGG 472
GG R++ A + R + +GAA P G +PY G G RGG A+GG
Sbjct: 115 GGRGRSNGAPRESRDNNRDNRDNKEGAA--PRSTRGGFEKPYVGRGGRGG------ARGG 166
Query: 473 HPRA 484
+ RA
Sbjct: 167 YSRA 170
>AF063007-5|AAD47125.1| 712|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 59
protein.
Length = 712
Score = 28.3 bits (60), Expect = 3.3
Identities = 22/64 (34%), Positives = 30/64 (46%)
Frame = +2
Query: 293 GGDPRAHRASVLIPPSQRRGVRDPQGAASYPEVAHGDGRQPYSGLGARGGDGLRISAQGG 472
GG R++ A + R + +GAA P G +PY G G RGG A+GG
Sbjct: 115 GGRGRSNGAPRESRDNNRDNRDNKEGAA--PRSTRGGFEKPYVGRGGRGG------ARGG 166
Query: 473 HPRA 484
+ RA
Sbjct: 167 YSRA 170
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 28.3 bits (60), Expect = 3.3
Identities = 23/64 (35%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +2
Query: 266 PKDVGHRCSGGDP-RAHRASVLIP-PSQRRGVRDPQGAASYPEVAHGDGRQPYSGL-GAR 436
P GH S G+P R + S +P PS R G + P G P + G G G GA
Sbjct: 188 PGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPQGPAGGPGQPGQSGGSGTPGQPGAPGAP 247
Query: 437 GGDG 448
G G
Sbjct: 248 GHPG 251
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 505 STSSPERRTWMPSLSRDP*AIASASAQSTVRL 410
STSS R T PSL R P + AS++ T +
Sbjct: 266 STSSSSRTTTAPSLERKPVSFTVASSKPTTNI 297
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein
F36F2.3a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 4.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -1
Query: 505 STSSPERRTWMPSLSRDP*AIASASAQSTVRL 410
STSS R T PSL R P + AS++ T +
Sbjct: 1031 STSSSSRTTTAPSLERKPVSFTVASSKPTTNI 1062
>Z81485-6|CAB03979.1| 784|Caenorhabditis elegans Hypothetical
protein C49F5.6 protein.
Length = 784
Score = 27.5 bits (58), Expect = 5.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 361 ISNSAALGGGDENRRPMCTRVSSTTPVAD 275
++NS+A+G EN PM + + PV+D
Sbjct: 475 LNNSSAMGISSENTAPMELKATGNDPVSD 503
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.5 bits (58), Expect = 5.8
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = -1
Query: 439 SASAQSTVRLSTISMRDFRIRSSPLWISNSAALGGGDENRRPMCTRVSSTTPVADIFRGS 260
++S S+ R + S+ RSS + NS+++G GD+N VS+T P+ + S
Sbjct: 500 TSSTPSSQRSAAGSVHTETPRSSMRFKENSSSVGSGDQN-------VSATIPIVPL---S 549
Query: 259 FPSKKPDQGESS 224
P K Q SS
Sbjct: 550 APPKAVHQSPSS 561
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 27.5 bits (58), Expect = 5.8
Identities = 23/72 (31%), Positives = 36/72 (50%)
Frame = -1
Query: 439 SASAQSTVRLSTISMRDFRIRSSPLWISNSAALGGGDENRRPMCTRVSSTTPVADIFRGS 260
++S S+ R + S+ RSS + NS+++G GD+N VS+T P+ + S
Sbjct: 500 TSSTPSSQRSAAGSVHTETPRSSMRFKENSSSVGSGDQN-------VSATIPIVPL---S 549
Query: 259 FPSKKPDQGESS 224
P K Q SS
Sbjct: 550 APPKAVHQSPSS 561
>Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical
protein F09B9.2b protein.
Length = 639
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 339 PNAAEFEIHKGLLRILKSRMEMV 407
PNA ++ + +G ++I KSRM M+
Sbjct: 298 PNAPQYHVPQGPIKIRKSRMSML 320
>Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical
protein F09B9.2a protein.
Length = 625
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 339 PNAAEFEIHKGLLRILKSRMEMV 407
PNA ++ + +G ++I KSRM M+
Sbjct: 284 PNAPQYHVPQGPIKIRKSRMSML 306
>AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative
actin-binding proteinUNC-115 protein.
Length = 639
Score = 27.1 bits (57), Expect = 7.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 339 PNAAEFEIHKGLLRILKSRMEMV 407
PNA ++ + +G ++I KSRM M+
Sbjct: 298 PNAPQYHVPQGPIKIRKSRMSML 320
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 27.1 bits (57), Expect = 7.7
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 338 SQRRGVRDPQGAASYPEVAHGDGRQPYSGLGARGGDGLRISAQGGHP 478
+Q RG P G P G Q + GL + G G RI+ G P
Sbjct: 84 AQSRGC--PAGPPGPPGQPGAPGEQGHPGLAGQPGSGARINPATGRP 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,991,672
Number of Sequences: 27780
Number of extensions: 212256
Number of successful extensions: 770
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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