Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30215
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 233 4e-62
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 233 4e-62
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 233 6e-62
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 233 6e-62
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 233 6e-62
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 233 6e-62
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 233 6e-62
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 233 6e-62
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 233 6e-62
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 233 6e-62
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 217 3e-57
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 145 1e-35
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 144 3e-35
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 99 9e-22
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 70 9e-13
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 44 6e-05
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 44 6e-05
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.28
AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical ... 31 0.37
U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 27 6.0
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 6.0
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 6.0
AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein. 27 8.0
AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein. 27 8.0
AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein. 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 233 bits (571), Expect = 4e-62
Identities = 114/124 (91%), Positives = 119/124 (95%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SL K
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 428 LLEG 439
L +G
Sbjct: 243 LPDG 246
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 102 HPVLLTEAPLNPKANR 117
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 233 bits (571), Expect = 4e-62
Identities = 114/124 (91%), Positives = 119/124 (95%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SL K
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 428 LLEG 439
L +G
Sbjct: 243 LPDG 246
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 102 HPVLLTEAPLNPKANR 117
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 233 bits (570), Expect = 6e-62
Identities = 113/124 (91%), Positives = 119/124 (95%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SL K
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 428 LLEG 439
L +G
Sbjct: 243 LPDG 246
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 102 HPVLLTEAPLNPKANR 117
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 233 bits (570), Expect = 6e-62
Identities = 113/124 (91%), Positives = 119/124 (95%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SL K
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 428 LLEG 439
L +G
Sbjct: 243 LPDG 246
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 102 HPVLLTEAPLNPKANR 117
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 233 bits (570), Expect = 6e-62
Identities = 113/124 (91%), Positives = 119/124 (95%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SL K
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 428 LLEG 439
L +G
Sbjct: 243 LPDG 246
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 102 HPVLLTEAPLNPKANR 117
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 233 bits (570), Expect = 6e-62
Identities = 113/124 (91%), Positives = 119/124 (95%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SL K
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 428 LLEG 439
L +G
Sbjct: 243 LPDG 246
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 102 HPVLLTEAPLNPKANR 117
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 233 bits (570), Expect = 6e-62
Identities = 113/124 (91%), Positives = 119/124 (95%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SL K
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 428 LLEG 439
L +G
Sbjct: 243 LPDG 246
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 102 HPVLLTEAPLNPKANR 117
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 233 bits (570), Expect = 6e-62
Identities = 113/124 (91%), Positives = 119/124 (95%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 79 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 138
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SL K
Sbjct: 139 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 198
Query: 428 LLEG 439
L +G
Sbjct: 199 LPDG 202
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 58 HPVLLTEAPLNPKANR 73
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 233 bits (570), Expect = 6e-62
Identities = 113/124 (91%), Positives = 119/124 (95%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 109 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 168
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SL K
Sbjct: 169 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 228
Query: 428 LLEG 439
L +G
Sbjct: 229 LPDG 232
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 88 HPVLLTEAPLNPKANR 103
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 233 bits (570), Expect = 6e-62
Identities = 113/124 (91%), Positives = 119/124 (95%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SL K
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 428 LLEG 439
L +G
Sbjct: 243 LPDG 246
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 102 HPVLLTEAPLNPKANR 117
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 217 bits (531), Expect = 3e-57
Identities = 105/124 (84%), Positives = 114/124 (91%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEGYALPHAI RLDLA
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEGYALPHAIQRLDLA 181
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDY+MKILTERGY+FTTTAEREIVRDIKEKLCYVA DFE E+A AA+S+SL K
Sbjct: 182 GRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYE 241
Query: 428 LLEG 439
L +G
Sbjct: 242 LPDG 245
Score = 37.1 bits (82), Expect = 0.007
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPK+NR
Sbjct: 101 HPVLLTEAPLNPKSNR 116
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 145 bits (352), Expect = 1e-35
Identities = 67/124 (54%), Positives = 91/124 (73%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
+MFE + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+YEG+AL H RLD+A
Sbjct: 126 VMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFALHHLTRRLDIA 185
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRD+T YL+K+L +RGY+F +A+ E VR +KEKLCY+A D EQE A +T L +
Sbjct: 186 GRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYT 245
Query: 428 LLEG 439
L +G
Sbjct: 246 LPDG 249
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 144 bits (349), Expect = 3e-35
Identities = 65/101 (64%), Positives = 82/101 (81%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
I FETFN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G+A+ HAI R+DLA
Sbjct: 126 IFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKGFAMKHAIQRMDLA 185
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 370
GRD+T+YL +L GY F + E EIVR++KE CY+ALD
Sbjct: 186 GRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD 226
Score = 32.3 bits (70), Expect = 0.21
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLT+APLNP NR
Sbjct: 105 HPVLLTDAPLNPLKNR 120
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 99 bits (238), Expect = 9e-22
Identities = 47/113 (41%), Positives = 72/113 (63%), Gaps = 8/113 (7%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPH 223
IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY +
Sbjct: 136 IMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGS 195
Query: 224 AILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 382
I + +AGRD+T ++ +L +R ++ E+ + IKEK CYV D +E
Sbjct: 196 CIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKE 248
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 70.1 bits (164), Expect = 9e-13
Identities = 30/75 (40%), Positives = 51/75 (68%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFE F PA Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ +
Sbjct: 145 IMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIG 204
Query: 248 GRDLTDYLMKILTER 292
G +T+ L ++L ++
Sbjct: 205 GDLITEQLAQMLDQQ 219
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 51.2 bits (117), Expect = 4e-07
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 3/108 (2%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
I E + + Q L LYA TTG+V+D G+ V + VP+ +GY + AI +
Sbjct: 295 ICLEDIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYG 353
Query: 248 GRDLTDYLMKILTERG---YSFTTTAEREIVRDIKEKLCYVALDFEQE 382
+ + D L L+ Y+F + E+ I+R E+ YV D+++E
Sbjct: 354 SQQMGDSLRASLSAHNKGLYAFQSPVEKLILRFALEQTTYVPEDYQKE 401
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/80 (26%), Positives = 43/80 (53%)
Frame = +2
Query: 155 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 334
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 335 DIKEKLCYVALDFEQEMATA 394
+ KE LC+V+ +F++ M A
Sbjct: 204 ECKEDLCFVSQNFDESMKEA 223
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/80 (26%), Positives = 43/80 (53%)
Frame = +2
Query: 155 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 334
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 335 DIKEKLCYVALDFEQEMATA 394
+ KE LC+V+ +F++ M A
Sbjct: 204 ECKEDLCFVSQNFDESMKEA 223
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 31.9 bits (69), Expect = 0.28
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 180 TPSPESSTIPVVRPEAYSESTAWMATYMAGEL 85
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AF047653-3|AAC04460.2| 378|Caenorhabditis elegans Hypothetical
protein W02F12.4a protein.
Length = 378
Score = 31.5 bits (68), Expect = 0.37
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 325 FPLSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 191
F L+GG + DL + G++ ++V E G+ Q + F+D Y
Sbjct: 187 FRLAGGKVAHNAIKYDLRVIYGELQRNEVLEEFGIPQDIYFIDSY 231
>U80448-9|AAB37822.2| 577|Caenorhabditis elegans Hypothetical
protein F59A3.8 protein.
Length = 577
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 187 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLVHHHR*EGNRS*HQGEALLCRP 366
++ +L++ S PR PP G + ++P+ DP G V+ + + + H E+L P
Sbjct: 72 NKPNLKKSPSNPRIPPGGSHPRKKPKVPNRDP--SGKHVNSDKKKPSAEAHDKESLSSPP 129
Query: 367 RLRAG 381
+ AG
Sbjct: 130 QTDAG 134
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 177 PSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNMXLGHLLP 49
P P P+V P +YSES W G+ S+ G+ P
Sbjct: 1719 PPPAKIHAPMVSPGSYSESEEWCKAGKEGKKVKSSKKSGYGAP 1761
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 177 PSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNMXLGHLLP 49
P P P+V P +YSES W G+ S+ G+ P
Sbjct: 1719 PPPAKIHAPMVSPGSYSESEEWCKAGKEGKKVKSSKKSGYGAP 1761
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 177 PSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNMXLGHLLP 49
P P P+V P +YSES W G+ S+ G+ P
Sbjct: 540 PPPAKIHAPMVSPGSYSESEEWCKAGKEGKKVKSSKKSGYGAP 582
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 177 PSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNMXLGHLLP 49
P P P+V P +YSES W G+ S+ G+ P
Sbjct: 540 PPPAKIHAPMVSPGSYSESEEWCKAGKEGKKVKSSKKSGYGAP 582
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 177 PSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNMXLGHLLP 49
P P P+V P +YSES W G+ S+ G+ P
Sbjct: 1719 PPPAKIHAPMVSPGSYSESEEWCKAGKEGKKVKSSKKSGYGAP 1761
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 177 PSPESSTIPVVRPEAYSESTAWMATYMAGELKVSNMXLGHLLP 49
P P P+V P +YSES W G+ S+ G+ P
Sbjct: 1719 PPPAKIHAPMVSPGSYSESEEWCKAGKEGKKVKSSKKSGYGAP 1761
>AY349016-1|AAQ55496.1| 394|Caenorhabditis elegans NHR-41 protein.
Length = 394
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 289 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 188
+GED V+G V S T GVG S + D G
Sbjct: 75 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 108
>AY349015-1|AAQ55495.1| 459|Caenorhabditis elegans NHR-41B protein.
Length = 459
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 289 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 188
+GED V+G V S T GVG S + D G
Sbjct: 172 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 205
>AY349014-1|AAQ55494.1| 583|Caenorhabditis elegans NHR-41A protein.
Length = 583
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -3
Query: 289 LGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGYG 188
+GED V+G V S T GVG S + D G
Sbjct: 296 IGEDEMTVIGLVPPSASPTSSGVGSSSSISDDSG 329
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,785,388
Number of Sequences: 27780
Number of extensions: 181262
Number of successful extensions: 651
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -