Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30215
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 222 1e-58
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 222 1e-58
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 221 2e-58
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 219 9e-58
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 218 2e-57
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 216 6e-57
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 216 6e-57
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 216 6e-57
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 216 6e-57
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 200 4e-52
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 188 2e-48
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 169 7e-43
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 132 1e-31
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 92 2e-19
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 73 1e-13
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 67 8e-12
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 65 3e-11
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 65 3e-11
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 59 2e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 54 4e-08
At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein, pu... 31 0.61
At5g43500.2 68418.m05318 expressed protein 29 1.4
At5g43500.1 68418.m05319 expressed protein 29 1.4
At2g39480.1 68415.m04845 ABC transporter family protein related ... 29 1.4
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 29 1.9
At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containi... 29 1.9
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 29 2.5
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 29 2.5
At3g55320.1 68416.m06144 ABC transporter family protein similar ... 29 2.5
At3g54430.1 68416.m06021 lateral root primordium (LRP) protein-r... 27 5.7
At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing ... 27 5.7
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 27 7.5
At4g18050.1 68417.m02686 ABC transporter family protein contains... 27 7.5
At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive eff... 27 7.5
At5g35830.1 68418.m04305 ankyrin repeat family protein contains ... 27 9.9
At3g28790.1 68416.m03593 expressed protein 27 9.9
At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PG... 27 9.9
At1g69670.1 68414.m08018 cullin, putative contains similarity to... 27 9.9
At1g26830.1 68414.m03270 cullin, putative similar to Cullin homo... 27 9.9
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 222 bits (543), Expect = 1e-58
Identities = 108/124 (87%), Positives = 115/124 (92%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 124 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTD LMKILTERGYSFTTTAEREIVRDIKEKLCY+ALD+EQE+ TA S+S+ K
Sbjct: 184 GRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYE 243
Query: 428 LLEG 439
L +G
Sbjct: 244 LPDG 247
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HP+LLTEAPLNPKANR
Sbjct: 103 HPILLTEAPLNPKANR 118
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 222 bits (543), Expect = 1e-58
Identities = 108/124 (87%), Positives = 115/124 (92%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 124 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTD LMKILTERGYSFTTTAEREIVRDIKEKLCY+ALD+EQE+ TA S+S+ K
Sbjct: 184 GRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELETAKTSSSVEKNYE 243
Query: 428 LLEG 439
L +G
Sbjct: 244 LPDG 247
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HP+LLTEAPLNPKANR
Sbjct: 103 HPILLTEAPLNPKANR 118
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 221 bits (541), Expect = 2e-58
Identities = 107/124 (86%), Positives = 115/124 (92%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 124 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDYLMKILTERGYSFTT+AEREIVRD+KEKL Y+ALD+EQEM TA S+S+ K
Sbjct: 184 GRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEKSYE 243
Query: 428 LLEG 439
L +G
Sbjct: 244 LPDG 247
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 103 HPVLLTEAPLNPKANR 118
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 219 bits (535), Expect = 9e-58
Identities = 106/124 (85%), Positives = 115/124 (92%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 124 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALDFEQE+ T+ S+S+ K
Sbjct: 184 GRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDFEQELETSKTSSSVEKSFE 243
Query: 428 LLEG 439
L +G
Sbjct: 244 LPDG 247
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 103 HPVLLTEAPLNPKANR 118
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 218 bits (532), Expect = 2e-57
Identities = 105/124 (84%), Positives = 115/124 (92%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 124 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL Y+ALD+EQE+ T+ S+S+ K
Sbjct: 184 GRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSKTSSSVEKSFE 243
Query: 428 LLEG 439
L +G
Sbjct: 244 LPDG 247
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 103 HPVLLTEAPLNPKANR 118
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 216 bits (528), Expect = 6e-57
Identities = 107/124 (86%), Positives = 113/124 (91%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 124 IMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 183
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTD LMKILTERGY FTTTAEREIVRDIKEKL YVALD+EQE+ TA +S+S+ K
Sbjct: 184 GRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELETAKSSSSVEKNYE 243
Query: 428 LLEG 439
L +G
Sbjct: 244 LPDG 247
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 103 HPVLLTEAPLNPKANR 118
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 216 bits (528), Expect = 6e-57
Identities = 105/124 (84%), Positives = 114/124 (91%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLA
Sbjct: 124 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLA 183
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+ S+S+ K
Sbjct: 184 GRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYE 243
Query: 428 LLEG 439
L +G
Sbjct: 244 LPDG 247
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 103 HPVLLTEAPLNPKANR 118
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 216 bits (528), Expect = 6e-57
Identities = 105/124 (84%), Positives = 114/124 (91%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLA
Sbjct: 124 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLA 183
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+ S+S+ K
Sbjct: 184 GRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYE 243
Query: 428 LLEG 439
L +G
Sbjct: 244 LPDG 247
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 103 HPVLLTEAPLNPKANR 118
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 216 bits (528), Expect = 6e-57
Identities = 105/124 (84%), Positives = 114/124 (91%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLA
Sbjct: 124 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLA 183
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL +VA+D+EQEM T+ S+S+ K
Sbjct: 184 GRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMETSKTSSSIEKNYE 243
Query: 428 LLEG 439
L +G
Sbjct: 244 LPDG 247
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKANR
Sbjct: 103 HPVLLTEAPLNPKANR 118
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 200 bits (488), Expect = 4e-52
Identities = 93/124 (75%), Positives = 110/124 (88%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA
Sbjct: 125 IMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 184
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLT+YL KI+ ERGY++TT+AEREIVRDIKEKLCY+A+D+EQEM A S+++ +
Sbjct: 185 GRDLTEYLTKIMMERGYTYTTSAEREIVRDIKEKLCYIAVDYEQEMEKATTSSAIDRTYE 244
Query: 428 LLEG 439
L +G
Sbjct: 245 LPDG 248
Score = 36.3 bits (80), Expect = 0.012
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HP+LLTEAPLNPK NR
Sbjct: 104 HPILLTEAPLNPKVNR 119
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 188 bits (458), Expect = 2e-48
Identities = 87/124 (70%), Positives = 106/124 (85%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFE+F+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+YEGYALPH ILRLDL
Sbjct: 113 IMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVYEGYALPHGILRLDLG 172
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GRDLTDYL++I+TERGY++TT+AEREIVRDIKEKLCYVALD+EQEM ++ K
Sbjct: 173 GRDLTDYLIEIMTERGYTYTTSAEREIVRDIKEKLCYVALDYEQEMEKTTKGWTIDKTYV 232
Query: 428 LLEG 439
L +G
Sbjct: 233 LPDG 236
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAP NPKANR
Sbjct: 92 HPVLLTEAPYNPKANR 107
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 169 bits (412), Expect = 7e-43
Identities = 84/124 (67%), Positives = 101/124 (81%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
IMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ VPIYEG ALPHAILRLDLA
Sbjct: 79 IMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEGSALPHAILRLDLA 138
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVG 427
GR LT+YLMKI+ ERGY T+AERE+VRDIKE+ Y+ALD+EQEM A S+++ +
Sbjct: 139 GRHLTNYLMKIMMERGY---TSAEREVVRDIKEQFGYIALDYEQEMEKATKSSAIDRTYE 195
Query: 428 LLEG 439
L +G
Sbjct: 196 LPDG 199
Score = 36.3 bits (80), Expect = 0.012
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 3 HPVLLTEAPLNPKANR 50
HPVLLTEAPLNPKA+R
Sbjct: 58 HPVLLTEAPLNPKADR 73
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 132 bits (320), Expect = 1e-31
Identities = 59/123 (47%), Positives = 87/123 (70%)
Frame = +2
Query: 71 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 250
MFE +N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY+ PH R+++AG
Sbjct: 124 MFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAG 183
Query: 251 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLRKLVGL 430
R +T YL+ +L+ RGY+ TA+ E VR+IKEKLCY++ D+++E +T L K L
Sbjct: 184 RHITAYLVDLLSRRGYAMNKTADFETVREIKEKLCYISYDYKRESQLGLETTILVKNYTL 243
Query: 431 LEG 439
+G
Sbjct: 244 PDG 246
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 92.3 bits (219), Expect = 2e-19
Identities = 42/110 (38%), Positives = 67/110 (60%), Gaps = 5/110 (4%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHTVPIYEGYALPHAIL 232
I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG +H VP+ EGY + I
Sbjct: 141 ILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHVVPVAEGYVIGSCIK 200
Query: 233 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQE 382
+ +AG+D+T ++ +++ ERG + ++ R +KE CY D +E
Sbjct: 201 SIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYCYTCSDIVKE 250
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 72.9 bits (171), Expect = 1e-13
Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 10/135 (7%)
Frame = +2
Query: 68 IMFETFNSPAMYVAI-QAVLSLYASGRTT---------GIVLDSGDGVSHTVPIYEGYAL 217
++FE F ++Y+A Q+++ LY + R +V+D G +H VP+ + L
Sbjct: 116 LVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTL 175
Query: 218 PHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA 397
HAI R+DL G+ T+YL ++++ R S E +V D KEKLC+V+LD +++ A
Sbjct: 176 NHAIKRIDLGGKAFTNYLKELVSYR--SINVMDETFLVDDAKEKLCFVSLDLLRDLRLAR 233
Query: 398 ASTSLRKLVGLLEGG 442
+L K +L G
Sbjct: 234 NGNTLIKSTYVLPDG 248
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 66.9 bits (156), Expect = 8e-12
Identities = 30/76 (39%), Positives = 48/76 (63%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
+MFE + PA+++A VL+ +A+GR T +V+D G G + P+++GY L A++ L
Sbjct: 146 LMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLG 205
Query: 248 GRDLTDYLMKILTERG 295
G LTD L+K L +G
Sbjct: 206 GEFLTDCLLKSLESKG 221
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 64.9 bits (151), Expect = 3e-11
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDL 244
++F+ N PA+ QAVL+LYA+ RT+GIV++ G V +PI G + + +
Sbjct: 225 VLFD-MNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGF 283
Query: 245 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 388
LT +L + + E SF + VR +KEKLCYVALD++ E++
Sbjct: 284 GALKLTGFLKEKMQENNISFQSL---YTVRTLKEKLCYVALDYKAELS 328
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 64.9 bits (151), Expect = 3e-11
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDL 244
++F+ N PA+ QAVL+LYA+ RT+GIV++ G V +PI G + + +
Sbjct: 225 VLFD-MNVPAVCAVNQAVLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGF 283
Query: 245 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMA 388
LT +L + + E SF + VR +KEKLCYVALD++ E++
Sbjct: 284 GALKLTGFLKEKMQENNISFQSL---YTVRTLKEKLCYVALDYKAELS 328
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 58.8 bits (136), Expect = 2e-09
Identities = 37/101 (36%), Positives = 49/101 (48%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 247
+MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A R +L
Sbjct: 110 LMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELG 169
Query: 248 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 370
G +LT + L + S + V +KE+ A D
Sbjct: 170 GTELTKLFAQELGKTNPSMNLSMSD--VEKLKEQYANCAED 208
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 54.4 bits (125), Expect = 4e-08
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Frame = +2
Query: 68 IMFETFNSPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIL 232
++FET+ PA+ + A S L+ + GIVL G +H++P +G +
Sbjct: 138 LLFETYGVPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSS 197
Query: 233 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEM 385
R ++ G +TDYL ++L+ + ++ E D+K + CY+A D+ E+
Sbjct: 198 RTNIGGYHVTDYLKQLLSLKYPFHSSRFTWEKAEDLKLEHCYIAPDYASEI 248
>At3g28860.1 68416.m03602 multidrug resistance P-glycoprotein,
putative similar to mdr-like P-glycoprotein GI:3849833
from [Arabidopsis thaliana]; contains Pfam profiles
PF00005: ABC transporter and PF00664: ABC transporter
transmembrane region; identical to cDNA MDR-like
p-glycoprotein (At3g28860) GI:24324261
Length = 1252
Score = 30.7 bits (66), Expect = 0.61
Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
Frame = +2
Query: 131 YASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT 310
+ SG+T +V SG G S V + E + P++ ++ L G ++ +K L E+
Sbjct: 390 FPSGKTVAVVGGSGSGKSTVVSLIERFYDPNS-GQILLDGVEIKTLQLKFLREQ-IGLVN 447
Query: 311 TAEREIVRDIKEKLCYVALDFEQ-EMATAAASTSLRKLVGLLEGGPGTQ 454
I E + Y D E+ AA++ + + LL G TQ
Sbjct: 448 QEPALFATTILENILYGKPDATMVEVEAAASAANAHSFITLLPKGYDTQ 496
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +2
Query: 83 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 262
FNS ++ + + +++ +G TT +++ G S V + +G +LP+ L G D+
Sbjct: 265 FNSAVVHQ--EGLSAVFGNGLTTACIVNIGAQTSTVVCVEDGVSLPNTEKILPFGGEDIC 322
Query: 263 DYLMKI 280
L+ I
Sbjct: 323 RCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +2
Query: 83 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 262
FNS ++ + + +++ +G TT +++ G S V + +G +LP+ L G D+
Sbjct: 277 FNSAVVHQ--EGLSAVFGNGLTTACIVNIGAQTSTVVCVEDGVSLPNTEKILPFGGEDIC 334
Query: 263 DYLMKI 280
L+ I
Sbjct: 335 RCLLWI 340
>At2g39480.1 68415.m04845 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1407
Score = 29.5 bits (63), Expect = 1.4
Identities = 33/110 (30%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Frame = +2
Query: 140 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAE 319
G+T +V SG G S + + E Y P A L L GRDL Y ++ L R + E
Sbjct: 1186 GQTVAVVGVSGSGKSTIISLIERYYDPVAGQVL-LDGRDLKSYNLRWL--RSHMGLIQQE 1242
Query: 320 REIV-RDIKEKLCYVALD-FEQEMATAAASTSLRKLVGLLEGGPGTQFAL 463
I I+E + Y + E EM AA + + L G T +
Sbjct: 1243 PIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHIGM 1292
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -3
Query: 319 LSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 191
L G G+R+T + D H V Q T ++ V +S+TF + Y
Sbjct: 86 LVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSY 128
>At1g03100.1 68414.m00285 pentatricopeptide (PPR) repeat-containing
protein low similarity to CRP1 [Zea mays] GI:3289002;
contains Pfam profile PF01535: PPR repeat
Length = 793
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +2
Query: 287 ERGYSFTTTAEREIVRDI--KEKLCYVALDFEQEMATAAASTSLRKLV 424
++GYS A E +++ KE L Y++L + AST LRKLV
Sbjct: 150 QKGYSLVEQAYEEGKQNLLEKEPLLYLSLALAKSGMAVPASTILRKLV 197
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 187 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 303
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 187 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 303
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At3g55320.1 68416.m06144 ABC transporter family protein similar to
multidrug resistant P-glycoprotein pmdr1 GI:4204793 from
[Solanum tuberosum]
Length = 1408
Score = 28.7 bits (61), Expect = 2.5
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 2/112 (1%)
Frame = +2
Query: 134 ASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 313
+ G+T +V SG G S + + E Y P A L L GRDL Y ++ L R +
Sbjct: 1185 SGGQTVAVVGVSGSGKSTIISLVERYYDPVAGQVL-LDGRDLKLYNLRWL--RSHMGLVQ 1241
Query: 314 AEREIV-RDIKEKLCYVALD-FEQEMATAAASTSLRKLVGLLEGGPGTQFAL 463
E I I+E + Y + E EM AA + + L G T +
Sbjct: 1242 QEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHIGM 1293
>At3g54430.1 68416.m06021 lateral root primordium (LRP)
protein-related similar to lateral root primordium 1
(LRP1) [Arabidopsis thaliana] GI:882341; contains Pfam
profile PF05142: Domain of unknown function (DUF702)
Length = 183
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 498 KRRPVNCNTTHYRANWVPGPPSRSPTS 418
K R NC TH ++ W+P +RS +S
Sbjct: 62 KSRGYNC-VTHVKSTWIPSSATRSSSS 87
>At2g44710.1 68415.m05564 RNA recognition motif (RRM)-containing
protein
Length = 809
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -2
Query: 452 GYRAPPREVLRAS*GRWRRQRWPSPARSRGR 360
G RAP RAS R RR R P P +R R
Sbjct: 520 GSRAPSSSAKRASGSRGRRPRPPLPPPARAR 550
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 254 DLTDYL-MKILTERGYSFTTTAEREI-VRDIKEKLCY 358
D TD + +KI + T + ER I VRD+K+ +CY
Sbjct: 6 DFTDLIRIKIKILHSTTHTLSVERTIPVRDLKQDICY 42
>At4g18050.1 68417.m02686 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter; similar to
multidrug-resistant protein CjMDR1 GI:14715462 from
[Coptis japonica]
Length = 1281
Score = 27.1 bits (57), Expect = 7.5
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Frame = +2
Query: 104 VAIQAVLSLYA-SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 280
V I A SL+ +G+T +V SG G S + + E + P + L + DL +K
Sbjct: 370 VQIFAGFSLFVPNGKTVALVGQSGSGKSTVISLIERFYDPESGQVL-IDNIDLKKLQLKW 428
Query: 281 LTERGYSFTTTAEREIVRDIKEKLCYVALD-FEQEMATAAASTSLRKLVGLLEGGPGT 451
+ + + IKE + Y D +QE+ TA + K + L G T
Sbjct: 429 IRSK-IGLVSQEPVLFATTIKENIAYGKEDATDQEIRTAIELANAAKFIDKLPQGLDT 485
>At1g65780.1 68414.m07465 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1065
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/31 (32%), Positives = 21/31 (67%)
Frame = +2
Query: 320 REIVRDIKEKLCYVALDFEQEMATAAASTSL 412
R +++D KE+ C+ + ++ +A A AST++
Sbjct: 826 RNLIQDAKERGCFHSAGEDESLAQAIASTNI 856
>At5g35830.1 68418.m04305 ankyrin repeat family protein contains
ankyrin repeats, Pfam:PF00023
Length = 282
Score = 26.6 bits (56), Expect = 9.9
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -3
Query: 361 DIAELLLDVTNDFPLSGGGERVTPL 287
+IA++L++ D P+ GG + TP+
Sbjct: 171 EIAKMLIEKNKDLPMIRGGGKTTPI 195
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 180 SPTPYPSTKVTLCPTPSS 233
SPTP PST PTPS+
Sbjct: 278 SPTPTPSTPTPSTPTPST 295
>At2g36910.1 68415.m04527 multidrug resistance P-glycoprotein (PGP1)
identical to P-glycoprotein GI:3849833 from [Arabidopsis
thaliana]; homologous to mammalian mdr gene,contains
ATP-binding cassette; related to multi drug resistance
proteins
Length = 1286
Score = 26.6 bits (56), Expect = 9.9
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 1/107 (0%)
Frame = +2
Query: 137 SGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTA 316
+G+T +V SG G S V + E + P++ L L G+DL ++ L ++ +
Sbjct: 395 AGKTIALVGSSGSGKSTVVSLIERFYDPNSGQVL-LDGQDLKTLKLRWLRQQ-IGLVSQE 452
Query: 317 EREIVRDIKEKLCYVALDFEQ-EMATAAASTSLRKLVGLLEGGPGTQ 454
IKE + D +Q E+ AA + + L G TQ
Sbjct: 453 PALFATSIKENILLGRPDADQVEIEEAARVANAHSFIIKLPDGFDTQ 499
>At1g69670.1 68414.m08018 cullin, putative contains similarity to
Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from
[Homo sapiens]; contains Pfam profile PF00888: Cullin
family
Length = 732
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +2
Query: 197 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 319
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERNLIVKLKTECGYQFTSKLE 462
>At1g26830.1 68414.m03270 cullin, putative similar to Cullin homolog
3 (CUL-3) SP:Q13618, GI:3639052 from [Homo sapiens];
contains Pfam profile PF00888: Cullin family
Length = 732
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +2
Query: 197 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 319
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERSLIVKLKTECGYQFTSKLE 462
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,619,993
Number of Sequences: 28952
Number of extensions: 183605
Number of successful extensions: 685
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 679
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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