Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30214
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99171-2|CAB16314.1|  710|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical p...    28   4.6  
Z98877-15|CAB63407.3|  572|Caenorhabditis elegans Hypothetical p...    28   4.6  
Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U41021-9|AAQ81276.1|  408|Caenorhabditis elegans Temporarily ass...    27   6.0  
U41021-8|AAQ81275.1|  406|Caenorhabditis elegans Temporarily ass...    27   6.0  
U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AC024765-5|AAF60527.3|  975|Caenorhabditis elegans Hypothetical ...    27   8.0  

>Z99171-2|CAB16314.1|  710|Caenorhabditis elegans Hypothetical
           protein F47G4.2 protein.
          Length = 710

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 109 KILNMQFFFFCKPNKNIYTLGI 174
           K+LN  FF FCK   N+Y+L I
Sbjct: 148 KLLNPDFFQFCKSFPNLYSLDI 169


>Z98877-16|CAH60800.1|  975|Caenorhabditis elegans Hypothetical
           protein Y69H2.10b protein.
          Length = 975

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 251 ESASECV-GCTCAREHRRDTPPTSAPHTRTC 340
           ++ ++C+ GCTC   ++RD+      H+R C
Sbjct: 484 KAPAKCLPGCTCRPAYKRDSDSGQCVHSRQC 514


>Z98877-15|CAB63407.3|  572|Caenorhabditis elegans Hypothetical
           protein Y69H2.10a protein.
          Length = 572

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = +2

Query: 251 ESASECV-GCTCAREHRRDTPPTSAPHTRTC 340
           ++ ++C+ GCTC   ++RD+      H+R C
Sbjct: 484 KAPAKCLPGCTCRPAYKRDSDSGQCVHSRQC 514


>Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical
           protein T07C12.6 protein.
          Length = 360

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -3

Query: 127 IAYLVFYSFSLIINS*CIKSYV 62
           I  L+FY F+  INS C+K Y+
Sbjct: 34  ITELIFYFFAFYINSVCLKVYL 55


>U41021-9|AAQ81276.1|  408|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 24, isoform b protein.
          Length = 408

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 451 IGRIGYRAPPRVFFFFF 401
           IG  G+ APP VF FFF
Sbjct: 348 IGAFGHEAPPLVFKFFF 364


>U41021-8|AAQ81275.1|  406|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 24, isoform a protein.
          Length = 406

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = -3

Query: 451 IGRIGYRAPPRVFFFFF 401
           IG  G+ APP VF FFF
Sbjct: 346 IGAFGHEAPPLVFKFFF 362


>U50135-4|AAA93455.3| 1487|Caenorhabditis elegans Hypothetical
           protein C52E12.4 protein.
          Length = 1487

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -1

Query: 381 DIALLDVKWRVRGVHVRVCGAEVGGVSRRCSRAHVHPTHSLALSIHT-PR 235
           D+A+ D   +++  HVR   A   G+  +  R H HP  +++   HT PR
Sbjct: 128 DLAICDAMAQLQQDHVREITARHNGIIEKQQRIH-HPPGTVSGGTHTLPR 176


>AC024765-5|AAF60527.3|  975|Caenorhabditis elegans Hypothetical
           protein Y39A3CR.3 protein.
          Length = 975

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -3

Query: 214 YQQRYKIAFRKNIRSLKCIYFCLAYKK 134
           +   Y +    NI   KC+Y CL ++K
Sbjct: 87  HSDNYTVKIEANILLAKCLYACLEFRK 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,944,280
Number of Sequences: 27780
Number of extensions: 207316
Number of successful extensions: 619
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)