Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30213
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.2  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    23   2.1  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   8.6  
DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory pro...    21   8.6  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   8.6  
DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory pro...    21   8.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.6  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   8.6  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
 Frame = +1

Query: 223 SFMLSLRQSPIS--QTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISFDES 378
           S M  L  SP+    T P   L   +  NP    ++ P+S   P +N  +  +S
Sbjct: 317 SVMTELYPSPVPGHSTSPNLPLTHNIAHNPYPSHSIYPSSNLMPLNNIQNLSQS 370


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 291 GCGKCTLRWRLGNRRL 244
           GC KCT + + G+R++
Sbjct: 74  GCSKCTEKQKEGSRKI 89


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 216 REVVHVIPSAISD 254
           R V+H++PS I D
Sbjct: 428 RGVIHLVPSKIRD 440


>DQ855502-1|ABH88189.1|  126|Tribolium castaneum chemosensory
           protein 16 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 300 LQ*GCGKCTLRWRLGNRRL 244
           LQ GC KC  + + G R++
Sbjct: 68  LQNGCAKCNEKHKEGVRKV 86


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 300 LQ*GCGKCTLRWRLGNRRL 244
           LQ  C KC+ R + G+R +
Sbjct: 69  LQTSCSKCSQRQKDGSRTI 87


>DQ855495-1|ABH88182.1|  126|Tribolium castaneum chemosensory
           protein 9 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -1

Query: 300 LQ*GCGKCTLRWRLGNRRL 244
           LQ GC KC  + + G R++
Sbjct: 68  LQNGCAKCNEKHKEGVRKV 86


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = -2

Query: 290 AAGSAHCGGVWEIGDCRRDNMNDLSYTI 207
           A G    G +W I + R +   D  YTI
Sbjct: 820 AKGEKPIGILWNINNKRLEPKGDNRYTI 847


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -2

Query: 98  WL*VACLAIGDADIIKNFRGVNFTKFHTRHL 6
           WL V CL +    I  NF      +F  R +
Sbjct: 57  WLNVCCLNLSIVTIFFNFATKKLEQFIVRFM 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,451
Number of Sequences: 336
Number of extensions: 2773
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)