Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30213
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 31 0.55
12_02_0674 - 21745321-21746223,21746229-21747608 30 0.96
01_01_1022 - 8064032-8064657,8064823-8064893,8065926-8066047,806... 30 1.3
12_01_0919 - 9086879-9087064,9087842-9087923,9088357-9089553,908... 29 1.7
03_02_0865 - 11895257-11895340,11896004-11896069,11896297-118963... 29 1.7
06_01_0993 + 7710016-7710977,7711081-7711316,7711422-7711501,771... 29 2.2
02_05_1033 + 33642479-33642688,33643089-33643343,33643479-336436... 29 2.9
08_01_1036 + 10520727-10521117,10521301-10521479,10521603-105225... 28 3.9
04_01_0617 - 8076624-8076971,8077761-8077883,8077965-8078035,807... 28 3.9
12_02_0998 + 25126114-25126596,25129213-25129339,25129349-251294... 28 5.1
08_01_0985 - 9960064-9960249,9960327-9960419,9960518-9960578,996... 28 5.1
11_02_0012 - 7346282-7347136,7347234-7347593 27 6.8
10_08_0514 + 18465474-18465760,18465888-18465978,18466670-184667... 27 6.8
06_03_1490 + 30497980-30498102,30499034-30500156,30500914-305011... 27 6.8
05_06_0218 + 26475951-26476252,26476361-26476522,26476769-26476970 27 6.8
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 27 6.8
03_02_0715 + 10621789-10623243,10624074-10625018 27 6.8
05_03_0359 - 12929240-12929376,12931379-12933497,12933594-129337... 27 8.9
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 31.1 bits (67), Expect = 0.55
Identities = 26/104 (25%), Positives = 38/104 (36%), Gaps = 3/104 (2%)
Frame = +1
Query: 61 SASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSL 240
SASP + S ++P+R P P Y++ P + P V +
Sbjct: 92 SASPPVAKGAVSPAVPTRPQNAPTPVTPPKEYNAPPPVELTPPAPTHVAPVAPPQAAVEN 151
Query: 241 RQSPISQTP---PQCALPAALLKNPSSVPNVQPASTQKPRSNSI 363
+ TP P PA + ++P VQP S P S I
Sbjct: 152 PAPVLPGTPALLPSVQAPAPSVARNPNLPIVQPPSVNNPPSRPI 195
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 30.3 bits (65), Expect = 0.96
Identities = 27/87 (31%), Positives = 36/87 (41%)
Frame = +1
Query: 100 SIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCA 279
S S R L T ++P + P T S P R + +LS S I TP C
Sbjct: 510 STASTRELSTATGKIPSTPRTNPLSTATSKIPSTPR-----TSLLSSSTSKIPSTPSTCE 564
Query: 280 LPAALLKNPSSVPNVQPASTQKPRSNS 360
L A K PS+ P ST +++S
Sbjct: 565 LSTATGKIPSTT-CTSPLSTATGKTSS 590
>01_01_1022 -
8064032-8064657,8064823-8064893,8065926-8066047,
8066540-8066689,8067153-8067179,8067485-8067552,
8067679-8067874
Length = 419
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +1
Query: 241 RQSPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISFDESQETFSMDL 402
+Q P Q Q P A P+ P A QKP S+S++E + FS+ +
Sbjct: 8 QQQPQQQQEQQ---PVAAAAVPTPAPPASEAQPQKPTRVSLSYEEISKLFSLPI 58
>12_01_0919 -
9086879-9087064,9087842-9087923,9088357-9089553,
9089598-9089961,9090086-9090188,9090234-9090479
Length = 725
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +1
Query: 241 RQSPISQTPPQCALPAALLKNPSSVPNV 324
+++P+ Q PP+ A+PA ++ P VPNV
Sbjct: 529 KENPVLQVPPEIAVPAVAMEIP--VPNV 554
>03_02_0865 -
11895257-11895340,11896004-11896069,11896297-11896355,
11896470-11896557,11897158-11897328,11897406-11897564,
11897653-11897835,11897931-11898012,11898753-11898959,
11899099-11899170,11901948-11902055,11902460-11902506
Length = 441
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +1
Query: 247 SPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISFDESQ 381
+P P LP+ + P P QP++ KP +S DES+
Sbjct: 184 APFRMALPTPPLPSQVPAPPPPPPPPQPSAANKPHLTDLSSDESE 228
>06_01_0993 +
7710016-7710977,7711081-7711316,7711422-7711501,
7711977-7712072,7712995-7713892,7713983-7714093,
7714657-7714751
Length = 825
Score = 29.1 bits (62), Expect = 2.2
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +1
Query: 232 LSLRQSPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISFDESQETFSMDL*AS 411
LS++ PIS + + N S P+VQP S +S +E FS+ S
Sbjct: 474 LSIKLDPISNSRININSASGRASNDSQAPSVQPQKCGPVDSTVVSMALKREQFSIPSMCS 533
Query: 412 H*FSEY 429
FS +
Sbjct: 534 ESFSSH 539
>02_05_1033 +
33642479-33642688,33643089-33643343,33643479-33643603,
33643827-33643908,33644008-33644076,33644102-33644341,
33644431-33644496,33645087-33645155,33645229-33645366,
33645681-33645754,33646146-33646255,33646428-33646525,
33646595-33646633,33646771-33646890,33646984-33647109,
33647321-33647382,33647467-33647518,33648182-33648436
Length = 729
Score = 28.7 bits (61), Expect = 2.9
Identities = 23/103 (22%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Frame = +1
Query: 31 KLTPRKFLIMSASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPG--GT 204
K+TP + A Q +HS S ++ P+ + + S+ GG++Y T
Sbjct: 502 KVTPGHVELDKAHSPGLQKSHSMQAISHLPSLSIPSSI-EAASTIIGGSLYMQLYNVLQT 560
Query: 205 RIVYERSFMLSLRQ---SPISQTPPQCALPAALLKNPSSVPNV 324
++ + +++Q ++ T P C PA+ +PSS ++
Sbjct: 561 NMLQREQILHAMKQLSGCDMAMTSPACIAPASRASSPSSALSI 603
>08_01_1036 +
10520727-10521117,10521301-10521479,10521603-10522593,
10522613-10522656
Length = 534
Score = 28.3 bits (60), Expect = 3.9
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +1
Query: 58 MSASPIARQATHSQSI-PSRRVLITD-PAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFM 231
M A A + Q + P+ R LITD + V S P T TTP T + +
Sbjct: 129 MQAEHQAAGPVYLQGVFPNYRSLITDVQPSIQAVPSVAP--TTQPTTPTSTPLPAPSAMA 186
Query: 232 LSLRQSPISQTPP 270
Q PI QTPP
Sbjct: 187 PGQPQQPIQQTPP 199
>04_01_0617 -
8076624-8076971,8077761-8077883,8077965-8078035,
8078108-8078360,8078613-8078768,8078854-8079770,
8079858-8079927,8082310-8082416,8082722-8082755,
8083621-8083940,8084031-8084820,8084890-8085046,
8085647-8086068
Length = 1255
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 4/40 (10%)
Frame = +1
Query: 250 PISQTPPQCA----LPAALLKNPSSVPNVQPASTQKPRSN 357
P+ T CA P + + P+S P + PAS++KP+ N
Sbjct: 4 PLRSTVLVCASAAMAPTSAPRLPTSAPPISPASSRKPKPN 43
>12_02_0998 +
25126114-25126596,25129213-25129339,25129349-25129459,
25130122-25130270,25130356-25130643,25130753-25130941,
25131445-25131619,25132219-25132316
Length = 539
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +1
Query: 133 PAQMPDV-YSSTP--GGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKN 303
PAQ D YSS P GGT Y + PGG S+ ++ TP C++P +L++
Sbjct: 472 PAQPVDTGYSSYPPYGGTSYGSPPGGAGPHNGGSY------GAVTGTP--CSMPVHVLQD 523
Query: 304 PSS 312
P +
Sbjct: 524 PGT 526
>08_01_0985 -
9960064-9960249,9960327-9960419,9960518-9960578,
9960667-9960774,9960921-9961106,9961427-9962421,
9962626-9962988,9963085-9963333,9963419-9963574
Length = 798
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 241 RQSPISQTPPQCALPAALLKNPSSVPNV 324
+++P+ + PP+ A+P A L+ P VP V
Sbjct: 442 KENPVPEVPPEIAVPEAALETP--VPEV 467
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 329 RPAHKNLDLTRYHSTSRRKPSAWISK 406
+PA++ D R +SR+K + W+SK
Sbjct: 109 KPAYRAADFQRQPKSSRKKINKWVSK 134
>10_08_0514 +
18465474-18465760,18465888-18465978,18466670-18466767,
18466852-18466949,18468192-18468321,18468410-18468597,
18470291-18470323,18470627-18471000,18471116-18471294,
18471421-18471532,18471655-18471771,18471875-18472189,
18472405-18472743
Length = 786
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +2
Query: 227 SCYPFGNLRFPKRHRNVHFPQPY*RIRLRYPTCSRPAHKNLDLTRYH 367
S P G+L H + + RI +R P C RPA + L R H
Sbjct: 284 SMRPDGSLDATSLHGLESWSRLVKRIHVRVPPCHRPAPRRLQQIREH 330
>06_03_1490 +
30497980-30498102,30499034-30500156,30500914-30501132,
30501228-30501454,30501810-30501884,30502250-30502321,
30502765-30502863,30502975-30503046,30503131-30503245,
30503455-30503523,30503625-30503952,30504320-30504437,
30504522-30505448
Length = 1188
Score = 27.5 bits (58), Expect = 6.8
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Frame = +1
Query: 61 SASPIA-RQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLS 237
SASP+ T ++ + + L T A +P SSTP S TP T V S L+
Sbjct: 195 SASPLGVTSQTPTRGVSPQVNLAT--AGIP-TQSSTPIAGYGSHTPASTTSVKANSADLN 251
Query: 238 LRQSPISQTPPQCALPAALLKNPSSVPNVQP-ASTQKPRSNSIS 366
L SP + + +P + +S V P A+T + + +S S
Sbjct: 252 LLSSPPAANDSKALVPLGNGLSSASTFGVDPFAATPQAKQDSSS 295
>05_06_0218 + 26475951-26476252,26476361-26476522,26476769-26476970
Length = 221
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Frame = +1
Query: 193 PGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPS-----SVPNVQPASTQKPRSN 357
P G++ F + + P ALP N + +VP PA+ ++PR+
Sbjct: 62 PSGSQFDISEFFFDDAPPAAVFNGAPTAALPDGAAANATRSAAEAVPAPAPAAVERPRTE 121
Query: 358 SISFDESQETFSMD 399
I+F E +D
Sbjct: 122 RIAFRTKSEIEILD 135
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 27.5 bits (58), Expect = 6.8
Identities = 23/90 (25%), Positives = 39/90 (43%)
Frame = +1
Query: 124 ITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKN 303
+T P+ +P +P IYS T + I S + S S T P + P + + N
Sbjct: 1629 LTSPSYVPTSLPHSPTSPIYSAT---SPIYSPSSPIYSPTSLSYSPTSPVYS-PTSPVYN 1684
Query: 304 PSSVPNVQPASTQKPRSNSISFDESQETFS 393
P+S + + P S S S+ + ++S
Sbjct: 1685 PTSSAYSPTSPSYNPTSPSYSYSPTSPSYS 1714
>03_02_0715 + 10621789-10623243,10624074-10625018
Length = 799
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 205 RIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNVQP 330
R +YER FML R SP + P C + ++ SSVP V+P
Sbjct: 713 RQIYERFFMLLSRPSPTIR-PDLCHNAS---EHGSSVPRVEP 750
>05_03_0359 -
12929240-12929376,12931379-12933497,12933594-12933773,
12933905-12934118,12934199-12934551,12934642-12934864,
12934953-12935230,12935456-12935725,12935817-12935939,
12936025-12936102,12936351-12936527,12936597-12936686,
12937010-12937120,12937397-12937585,12937667-12937858,
12937990-12938076,12938153-12938257,12938340-12938396,
12938471-12938545,12938647-12938763,12938876-12939000,
12939082-12939121,12939241-12939291,12939382-12939569,
12939808-12939901,12939976-12940149,12940242-12940337,
12940597-12940689,12940794-12940955,12941034-12941240,
12941356-12941728,12942379-12942436,12943096-12943171,
12943874-12943941,12944321-12944642
Length = 2433
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = +1
Query: 55 IMSASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFML 234
+++AS H+ + +R + + A+ P Y S GG +Y T T V + L
Sbjct: 707 LLNASDFRENKIHTGWLDTR-IAMRVQAERPPWYISVVGGALYKTVTANTATVSDYVGYL 765
Query: 235 SLRQSP 252
+ Q P
Sbjct: 766 TKGQIP 771
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,047,791
Number of Sequences: 37544
Number of extensions: 332026
Number of successful extensions: 1032
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1032
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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