Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30213
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 33 0.086
At3g62680.1 68416.m07041 proline-rich family protein contains pr... 32 0.20
At4g00890.1 68417.m00120 proline-rich family protein contains pr... 29 1.9
At4g04130.1 68417.m00583 Ulp1 protease family protein contains P... 29 2.5
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 29 2.5
At5g40290.1 68418.m04887 metal-dependent phosphohydrolase HD dom... 28 3.2
At4g08250.1 68417.m01361 scarecrow transcription factor family p... 28 4.3
At5g22320.1 68418.m02604 leucine-rich repeat family protein cont... 27 5.7
At4g37750.1 68417.m05344 ovule development protein aintegumenta ... 27 5.7
At3g28550.1 68416.m03565 proline-rich extensin-like family prote... 27 5.7
At1g62260.1 68414.m07024 pentatricopeptide (PPR) repeat-containi... 27 5.7
At1g31250.1 68414.m03825 proline-rich family protein contains pr... 27 5.7
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 27 7.5
At3g11540.1 68416.m01407 gibberellin signal transduction protein... 27 7.5
At1g26540.1 68414.m03234 agenet domain-containing protein contai... 27 7.5
At2g15090.1 68415.m01720 fatty acid elongase, putative similar ... 27 9.9
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 33.5 bits (73), Expect = 0.086
Identities = 26/93 (27%), Positives = 39/93 (41%)
Frame = +1
Query: 61 SASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFMLSL 240
S++P + A S + S T PA +S+T G ST G+ + F +
Sbjct: 414 SSAPASTMAFPSFGVTSSATNTT-PASSAATFSTTGFGLASSTPATGSTNSFT-GFAVPK 471
Query: 241 RQSPISQTPPQCALPAALLKNPSSVPNVQPAST 339
+P S + PQ PA PSS PA++
Sbjct: 472 TSTPASSSQPQTTSPAFSFSLPSSTSTTAPATS 504
>At3g62680.1 68416.m07041 proline-rich family protein contains
proline-rich region, INTERPRO:IPR000694
Length = 313
Score = 32.3 bits (70), Expect = 0.20
Identities = 27/113 (23%), Positives = 41/113 (36%)
Frame = +1
Query: 10 CLVWNFVKLTPRKFLIMSASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYST 189
CL+ + V +T + S+ P+ + H ++PS P P VY T +Y T
Sbjct: 11 CLILSLVTITTADYYSPSSPPVYKSPEHKPTLPS-------PVYTPPVYKPTLSPPVY-T 62
Query: 190 TPGGTRIVYERSFMLSLRQSPISQTPPQCALPAALLKNPSSVPNVQPASTQKP 348
P VY P+ P +P + P P + P KP
Sbjct: 63 KPTIPPPVYTPPVYKHTPSPPVYTKP---TIPPPVYTPPVYKPTLSPPVYTKP 112
>At4g00890.1 68417.m00120 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 431
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +1
Query: 229 MLSLRQSPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSIS 366
++ LRQS +S PP+ + L ++P P P S +P+S +S
Sbjct: 19 LVQLRQS-VSSQPPRRTVQETLSQSPPQSPLFHPQSPPEPKSLPLS 63
>At4g04130.1 68417.m00583 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At2g11345, At3g42690
Length = 1200
Score = 28.7 bits (61), Expect = 2.5
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +1
Query: 124 ITDPAQMPDVYSSTPGGTIYSTTPGGTRIV--YERSFMLSLRQSPISQTPPQCALPAALL 297
I++P +M ++P T P T+ + E L R QTP P A +
Sbjct: 641 ISEPQEMGRESPTSPVPTATQDKPMDTKPIKTMEEPLDLGNRAGSPRQTPCSPVTPIAQV 700
Query: 298 KNPSSVPNVQPASTQKPRSN 357
SS+ V PA +K R+N
Sbjct: 701 IPDSSIVAVSPAYFEKERTN 720
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 28.7 bits (61), Expect = 2.5
Identities = 26/105 (24%), Positives = 43/105 (40%)
Frame = +1
Query: 52 LIMSASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTPGGTRIVYERSFM 231
L +S + +A AT Q+ ++ + A P +Y + P Y+T P +Y
Sbjct: 16 LSLSGASVAADATVKQNF-NKYETDSGHAHPPPIYGAPPS---YTTPPPP---IYSPPIY 68
Query: 232 LSLRQSPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSIS 366
Q P + +PP P P+ P + P QKP + + S
Sbjct: 69 PPPIQKPPTYSPPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPTYS 113
>At5g40290.1 68418.m04887 metal-dependent phosphohydrolase HD
domain-containing protein similar to SP|Q60710
Interferon-gamma inducible protein MG11 {Mus musculus};
contains Pfam profile PF01966: HD domain
Length = 448
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +2
Query: 206 E*CTRGRSCYPFGNLRFPKR-HRNVH 280
E C SC+P LRF K H NVH
Sbjct: 3 EYCNEDLSCFPANELRFSKHVHDNVH 28
>At4g08250.1 68417.m01361 scarecrow transcription factor family
protein SCARECROW - Arabidopsis thaliana, PID:g1497987
Length = 483
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = -3
Query: 313 PKTDSSVGLREVHIAVAFGKSEIAEGIT*TTSRTLFLYLQE*LS 182
PKTD S GLR VH+ VA + + +R + L++ +S
Sbjct: 94 PKTDESKGLRLVHLLVAAADASTGANKSRELTRVILARLKDLVS 137
>At5g22320.1 68418.m02604 leucine-rich repeat family protein
contains leucine rich repeat (LRR) domains, Pfam:PF00560
Length = 452
Score = 27.5 bits (58), Expect = 5.7
Identities = 16/53 (30%), Positives = 21/53 (39%)
Frame = +1
Query: 232 LSLRQSPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISFDESQETF 390
L++R +PIS LL +V N QP + I D ETF
Sbjct: 228 LNIRGNPISDNDKSAKKVRTLLLPSVNVFNAQPLEKSSRNAKHIRLDTDDETF 280
>At4g37750.1 68417.m05344 ovule development protein aintegumenta
(ANT) identical to ovule development protein
aintegumenta (ANT) (GI:1244708) ) [Arabidopsis thaliana]
Length = 555
Score = 27.5 bits (58), Expect = 5.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 64 ASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYS 186
+S + AT S S+P + V+ + + Y S P G IYS
Sbjct: 41 SSSTSSAATSSSSVPPQLVVGDNTSNFGVCYGSNPNGGIYS 81
>At3g28550.1 68416.m03565 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1018
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 52 LIMSASPIARQATHSQSIPSRRVLITDPAQMPDVYSSTPGGTIYSTTP 195
++ + P + S+P +V P +PDVYSS P YS P
Sbjct: 19 MVAAYEPYTDSSPPPYSVPLPKVEYKSPP-LPDVYSSPPPPLEYSPAP 65
>At1g62260.1 68414.m07024 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 656
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 223 SFMLSLRQSPISQTPPQCALPAALLKN 303
S ++ R+ P+ + P CAL A L+KN
Sbjct: 185 SAVVLFRKMPVKDSSPLCALVAGLIKN 211
>At1g31250.1 68414.m03825 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
similar to prolin rich protein GB:S44189 GI:433706 from
[Zea mays]
Length = 165
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/58 (29%), Positives = 25/58 (43%)
Frame = +1
Query: 223 SFMLSLRQSPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISFDESQETFSM 396
S + SP + P A P+ L P + P+V+PA T S S+ + SM
Sbjct: 50 SLSIPPNSSPSVKLTPPYASPSVKLTPPYASPSVRPAGTTPNASPSVKLTPPYASPSM 107
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 244 QSPISQTPPQCALPAALLKNPSSVPNVQPASTQKP 348
QSP Q PP P + +K P++ P V+P +T P
Sbjct: 148 QSPPVQ-PPTYKPPTSPVKPPTTTPPVKPPTTTPP 181
>At3g11540.1 68416.m01407 gibberellin signal transduction protein
(SPINDLY) identical to spindly GB:AAC49446 (GI:1589778)
[Arabidopsis thaliana]; contains Pfam profile PF00515
TPR Domain
Length = 914
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/25 (44%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +3
Query: 45 KVFNNVSVTYREAGH-SQPIDSFKE 116
+ FNN+ V YR+AG+ + ID+++E
Sbjct: 398 EAFNNLGVLYRDAGNITMAIDAYEE 422
>At1g26540.1 68414.m03234 agenet domain-containing protein contains
Pfam PF05641: Agenet domain
Length = 695
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 238 LRQSPISQTPPQCALPAALLKNPSSVPNVQPASTQKPRSNSISFDESQET 387
L+Q PI +TPP L +++ S+ ++ P S K + ++ E ET
Sbjct: 287 LKQKPIKETPP-TILKRKPMRSCSAAKSMTPTSATKHLRSFLNSKEISET 335
>At2g15090.1 68415.m01720 fatty acid elongase, putative similar to
fatty acid elongase 1 [GI:881615]
Length = 481
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 234 IPSAISDFPNATAMCTSRSPTEESVFG 314
IP + FP M SR TEE +FG
Sbjct: 131 IPEGLQCFPLQQGMGASRKETEEVIFG 157
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,644,503
Number of Sequences: 28952
Number of extensions: 246524
Number of successful extensions: 762
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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