Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30212
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein. 34 0.069
AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein. 34 0.069
AF154122-1|AAF74523.1| 669|Caenorhabditis elegans N-acetylgluco... 34 0.069
AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation... 34 0.069
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 32 0.28
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.37
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.37
U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical pr... 31 0.65
AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-li... 31 0.65
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 2.0
Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical pr... 29 2.6
AC006665-2|AAF39904.1| 341|Caenorhabditis elegans Hypothetical ... 28 3.4
U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domai... 28 4.6
Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical p... 27 6.0
Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical p... 27 6.0
U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical p... 27 6.0
AL132863-11|CAB60578.2| 143|Caenorhabditis elegans Hypothetical... 27 6.0
Z82052-5|CAB04828.1| 382|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z66498-3|CAA91293.2| 687|Caenorhabditis elegans Hypothetical pr... 27 8.0
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 27 8.0
U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna synt... 27 8.0
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 27 8.0
AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA sy... 27 8.0
>AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein.
Length = 669
Score = 33.9 bits (74), Expect = 0.069
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +2
Query: 5 YLPPFNSFYYPFAQRSNDYELHSEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAFDKEI 172
++ P FYY + S Y SEKN Y+ + F + E+ F Q F +
Sbjct: 17 FITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRFPSNV 76
Query: 173 DLHSSKAVN---FVGNYWQTN 226
++ + +N ++ N W+T+
Sbjct: 77 EIEYPECLNKMKWIKNGWKTH 97
>AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein.
Length = 661
Score = 33.9 bits (74), Expect = 0.069
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +2
Query: 5 YLPPFNSFYYPFAQRSNDYELHSEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAFDKEI 172
++ P FYY + S Y SEKN Y+ + F + E+ F Q F +
Sbjct: 9 FITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRFPSNV 68
Query: 173 DLHSSKAVN---FVGNYWQTN 226
++ + +N ++ N W+T+
Sbjct: 69 EIEYPECLNKMKWIKNGWKTH 89
>AF154122-1|AAF74523.1| 669|Caenorhabditis elegans
N-acetylglucosaminyltransferase V protein.
Length = 669
Score = 33.9 bits (74), Expect = 0.069
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +2
Query: 5 YLPPFNSFYYPFAQRSNDYELHSEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAFDKEI 172
++ P FYY + S Y SEKN Y+ + F + E+ F Q F +
Sbjct: 17 FITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRFPSNV 76
Query: 173 DLHSSKAVN---FVGNYWQTN 226
++ + +N ++ N W+T+
Sbjct: 77 EIEYPECLNKMKWIKNGWKTH 97
>AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation
related protein 2 protein.
Length = 669
Score = 33.9 bits (74), Expect = 0.069
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +2
Query: 5 YLPPFNSFYYPFAQRSNDYELHSEKN--YEEIRFLDIYEK--TFFQYLQQGHFKAFDKEI 172
++ P FYY + S Y SEKN Y+ + F + E+ F Q F +
Sbjct: 17 FITPLGFFYYTISNESKRYSEESEKNYGYQTLEFTESPEEISVDFDKYSQSECSRFPSNV 76
Query: 173 DLHSSKAVN---FVGNYWQTN 226
++ + +N ++ N W+T+
Sbjct: 77 EIEYPECLNKMKWIKNGWKTH 97
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 123 SSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIYSKKTSSNSTS 266
+++TSS T +PST + + ST TT P S TS+++T+
Sbjct: 586 TTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTT 633
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 123 SSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIYSKKTSSNSTS 266
+++TSS T +PST + + ST TT P S TS+++T+
Sbjct: 586 TTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTT 633
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.37
Identities = 25/70 (35%), Positives = 33/70 (47%)
Frame = +3
Query: 57 TTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIY 236
TTS T TT S+T +S T+++VTS ST +T A+T P
Sbjct: 389 TTSTTF--TTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPST 446
Query: 237 SKKTSSNSTS 266
S T+S STS
Sbjct: 447 STVTTSPSTS 456
Score = 29.1 bits (62), Expect = 2.0
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +3
Query: 6 TSRLSTPFTIHLPKEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICT- 182
TS ST T P +TTS + TT+ S+ +S +S VTS S+ + T
Sbjct: 417 TSTSSTVTTTE-PTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTP 475
Query: 183 VAKQSTLWATTGRRTPIYSKKTSSNSTS 266
+ +ST +T+ T S S ST+
Sbjct: 476 TSTEST--STSPSSTVTTSTTAPSTSTT 501
Score = 28.3 bits (60), Expect = 3.4
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 6 TSRLSTPFTIHLPKEAMTTSCT--ARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLIC 179
TS + P + AM+TS + + TT + S+TF S++TSS T++ S+ +
Sbjct: 291 TSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTI-- 348
Query: 180 TVAKQSTLWATT 215
T + ST +T+
Sbjct: 349 TSSPSSTTLSTS 360
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 63 SCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIYSK 242
S T RR + +T ++ ++S T+ P+T + TV +T+ +T T S
Sbjct: 252 SPTLRRMKRDAGDNTC--DYTIESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMST 309
Query: 243 KTSSNSTS 266
TS+ STS
Sbjct: 310 STSTPSTS 317
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.37
Identities = 25/70 (35%), Positives = 33/70 (47%)
Frame = +3
Query: 57 TTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIY 236
TTS T TT S+T +S T+++VTS ST +T A+T P
Sbjct: 389 TTSTTF--TTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPST 446
Query: 237 SKKTSSNSTS 266
S T+S STS
Sbjct: 447 STVTTSPSTS 456
Score = 29.1 bits (62), Expect = 2.0
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +3
Query: 6 TSRLSTPFTIHLPKEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICT- 182
TS ST T P +TTS + TT+ S+ +S +S VTS S+ + T
Sbjct: 417 TSTSSTVTTTE-PTTTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTP 475
Query: 183 VAKQSTLWATTGRRTPIYSKKTSSNSTS 266
+ +ST +T+ T S S ST+
Sbjct: 476 TSTEST--STSPSSTVTTSTTAPSTSTT 501
Score = 28.3 bits (60), Expect = 3.4
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +3
Query: 6 TSRLSTPFTIHLPKEAMTTSCT--ARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLIC 179
TS + P + AM+TS + + TT + S+TF S++TSS T++ S+ +
Sbjct: 291 TSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTI-- 348
Query: 180 TVAKQSTLWATT 215
T + ST +T+
Sbjct: 349 TSSPSSTTLSTS 360
Score = 27.9 bits (59), Expect = 4.6
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +3
Query: 63 SCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIYSK 242
S T RR + +T ++ ++S T+ P+T + TV +T+ +T T S
Sbjct: 252 SPTLRRMKRDAGDNTC--DYTIESTSTSTTTPTTTTVTSTVTSTTTVPTSTSTVTTAMST 309
Query: 243 KTSSNSTS 266
TS+ STS
Sbjct: 310 STSTPSTS 317
>U28941-5|AAM98026.2| 989|Caenorhabditis elegans Hypothetical
protein F31D5.4 protein.
Length = 989
Score = 30.7 bits (66), Expect = 0.65
Identities = 20/79 (25%), Positives = 35/79 (44%)
Frame = +3
Query: 30 TIHLPKEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWA 209
T +P TT+ + T +ST + + T++ VT+ P+T + + ST
Sbjct: 241 TTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTT 300
Query: 210 TTGRRTPIYSKKTSSNSTS 266
T T + S+N+TS
Sbjct: 301 TPSTSTHTTTVTYSTNATS 319
>AY314775-1|AAQ84882.1| 971|Caenorhabditis elegans methuselah-like
protein MTH-2 protein.
Length = 971
Score = 30.7 bits (66), Expect = 0.65
Identities = 20/79 (25%), Positives = 35/79 (44%)
Frame = +3
Query: 30 TIHLPKEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWA 209
T +P TT+ + T +ST + + T++ VT+ P+T + + ST
Sbjct: 223 TTMIPTTPTTTTIASTSTVTSIVTSTTVTSTTVPTTTVVTTVPTTTATSTSTSTASTTTT 282
Query: 210 TTGRRTPIYSKKTSSNSTS 266
T T + S+N+TS
Sbjct: 283 TPSTSTHTTTVTYSTNATS 301
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 29.9 bits (64), Expect = 1.1
Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +3
Query: 6 TSRLSTPFTIHLPKEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTV 185
+ RL+T T + R T + SST + SS TSS T++P+T T
Sbjct: 522 SQRLTTTTKSSTTSPFATRFVFSTRVTFRPVSSTVVSTKSSTTSS-TTTKPTTLSTTTTT 580
Query: 186 AKQSTLWA----TTGRRTPIYSKKTSSNSTS 266
ST + +T + TP S+ T ++T+
Sbjct: 581 QVPSTTTSVTVPSTQKATPSPSRTTKKSTTT 611
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 29.5 bits (63), Expect = 1.5
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +3
Query: 21 TPFTIHLPKE--AMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQ 194
TP T LP A+ T+ TA RTT K + + R +NT T P+T L T A
Sbjct: 361 TPATTTLPTTSLALETTTTATRTTAKITAVATVAR--TNT----TQPPTTTPLSSTTALP 414
Query: 195 STLWATTGRRTPIYSKKTSSNSTS 266
+TL +++ + S +S S
Sbjct: 415 TTLTSSSSTESTDGSSTQTSTHPS 438
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +3
Query: 69 TARRTTKKFASSTFMRRHSSNTSSKVTSRPS-TKKLICTVAKQSTLWATTGRRT 227
T R TTK+ ++ + ++ T + RP+ TK + + K++T +TT R T
Sbjct: 292 TTRTTTKRLTTTKATLKTTTKTLPVIPPRPNVTKPITRSTTKRTTTRSTTKRLT 345
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 29.1 bits (62), Expect = 2.0
Identities = 25/84 (29%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +3
Query: 18 STPFTIHLPKEAMTTSCT-ARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQ 194
+TP T TTS T + TT ++T + + T+S TS P+T + T
Sbjct: 263 TTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTS--TSTPTTTTTMQTTTPS 320
Query: 195 STLWATTGRRTPIYSKKTSSNSTS 266
+T TT T S T++ ST+
Sbjct: 321 TTSTPTTTSTTTTTSASTTTISTT 344
>Z84574-6|CAE17784.1| 174|Caenorhabditis elegans Hypothetical
protein F33E2.7 protein.
Length = 174
Score = 28.7 bits (61), Expect = 2.6
Identities = 20/74 (27%), Positives = 32/74 (43%)
Frame = +3
Query: 42 PKEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGR 221
PK + TT+ T TT +T ++ T + T+ P+T T + TT R
Sbjct: 83 PKPSTTTTTTTTPTTTTTTPTT-----TTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTR 137
Query: 222 RTPIYSKKTSSNST 263
TP+ +S +T
Sbjct: 138 STPLTEVFRTSTTT 151
>AC006665-2|AAF39904.1| 341|Caenorhabditis elegans Hypothetical
protein H27M09.5 protein.
Length = 341
Score = 28.3 bits (60), Expect = 3.4
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +3
Query: 60 TSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGR--RTPI 233
TS + + TKK S ++ S K +++ STKKLI T+ TL + + R P+
Sbjct: 248 TSPSKEKPTKKI-SRNYLADPLS-PGDKKSAKISTKKLISTIKPPKTLSKKSAKSTRNPL 305
Query: 234 YSKKTSSNS 260
S SNS
Sbjct: 306 KSPSKRSNS 314
>U43375-1|AAA83618.1| 709|Caenorhabditis elegans Sulfatase domain
protein protein 1 protein.
Length = 709
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +2
Query: 5 YLPPFNSFYYPFAQRSNDYELHSEKNYEEIRFLDIYEKTFFQYLQQGH-FKAFDKEIDLH 181
Y+PP ++ + S Y N E +F YEK +F L K DK I +
Sbjct: 143 YIPPGWDEWHAIVKNSKFYNYTMNSNGEREKFGSEYEKDYFTDLVTNRSLKFIDKHIKIR 202
Query: 182 SSKAVNFVGNY 214
+ + + +Y
Sbjct: 203 AWQPFALIISY 213
>Z74472-5|CAA98943.1| 802|Caenorhabditis elegans Hypothetical
protein F23H12.5 protein.
Length = 802
Score = 27.5 bits (58), Expect = 6.0
Identities = 20/71 (28%), Positives = 29/71 (40%)
Frame = +3
Query: 48 EAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRT 227
E + S + + T STF ++ + TS PST T ST TT T
Sbjct: 171 ETVKMSPQSPKPTYPSVPSTFEFEKYPKSTEEPTSTPSTSTSTTTTTTTSTTTTTTEAPT 230
Query: 228 PIYSKKTSSNS 260
+ KT++ S
Sbjct: 231 TTTTIKTTTES 241
>Z46787-14|CAA86751.1| 1186|Caenorhabditis elegans Hypothetical
protein R74.1 protein.
Length = 1186
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 38 FAQRSNDYELHSEKNYEEIRFLDIYEKTFFQY 133
FA N +E+NYE F D + FF+Y
Sbjct: 800 FANEMNSLIAATEQNYEATNFKDALKTGFFEY 831
>Z36238-11|CAA85280.1| 1186|Caenorhabditis elegans Hypothetical
protein R74.1 protein.
Length = 1186
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 38 FAQRSNDYELHSEKNYEEIRFLDIYEKTFFQY 133
FA N +E+NYE F D + FF+Y
Sbjct: 800 FANEMNSLIAATEQNYEATNFKDALKTGFFEY 831
>U00032-10|AAA50637.1| 418|Caenorhabditis elegans Hypothetical
protein F37A4.9 protein.
Length = 418
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +3
Query: 15 LSTPFTIHLPKEAMTTSCTAR---RTTKKFAS--STFMRRHSSNTSSKVTSRPSTKKL 173
L + +++P + +T C T + +S + R HS++++S+ S P+TK L
Sbjct: 154 LRSAMNVYIPNDILTIGCELTIFGECTTQISSLFKPYQRTHSASSTSRSLSSPNTKCL 211
>AL132863-11|CAB60578.2| 143|Caenorhabditis elegans Hypothetical
protein Y37H2A.11 protein.
Length = 143
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/63 (23%), Positives = 28/63 (44%)
Frame = +3
Query: 81 TTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQSTLWATTGRRTPIYSKKTSSNS 260
TT + + T + ++ T T+ +T + CT + G TPI S T +N+
Sbjct: 42 TTYPYIAPTTITVPTTTTEPTTTTTTTTNCVSCTAGLLTFTTGNIGDTTPIQSPGTDANN 101
Query: 261 TSV 269
++
Sbjct: 102 CAI 104
>Z82052-5|CAB04828.1| 382|Caenorhabditis elegans Hypothetical
protein T25E12.10 protein.
Length = 382
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 42 PKEAMTTSCTARRTTKKFASS-TFMRRHSSNTSSKVTSRPSTKKLIC 179
P +TTS + RT++ ++ T + SN +S T+ PST K+IC
Sbjct: 78 PASQLTTSAISSRTSEVQTNAITTTQGTPSNKTS--TTTPSTSKVIC 122
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 6 TSRLSTPFTIHLPKEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPST 164
T+ +TP T TT+ T +TTK ++T + +++T + T+ P T
Sbjct: 270 TTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTKTTK-TTSTPTTTTTTPKT 321
>Z68003-2|CAA91976.2| 560|Caenorhabditis elegans Hypothetical
protein E02H4.2 protein.
Length = 560
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 60 TSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAKQST 200
T+C R ++K SS + + S + P+ + CTV +QS+
Sbjct: 367 TNCQTRNQSEKMKSSQCLIADVAENESPNETGPAEFNIFCTVPEQSS 413
>Z66498-3|CAA91293.2| 687|Caenorhabditis elegans Hypothetical
protein M195.3 protein.
Length = 687
Score = 27.1 bits (57), Expect = 8.0
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +3
Query: 42 PKEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPS--TKKLICTVAKQSTLWATT 215
P + ++ + + +K SS+ RR S + S PS T I T A S +T
Sbjct: 597 PGPSTNSNVSIEASVEKSPSSSTSRR-----SISIRSSPSIHTVSAISTAAPDSR--PST 649
Query: 216 GRRTPIYSKKTSSNST 263
T I SKK+S NST
Sbjct: 650 ASATSIISKKSSKNST 665
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +3
Query: 57 TTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTK--KLICTVAKQSTLWATTGRRTP 230
TTS + ++ ++ R SS+T S T+ PST+ I T +QS+ ++ ++T
Sbjct: 289 TTSSSTMLSSTTLLTTETETRESSSTGSTQTTTPSTEPSTTITTPMEQSST-VSSVQKTR 347
Query: 231 IYSKKTSSNST 263
K SS++T
Sbjct: 348 TSEDKPSSSTT 358
>U58753-9|AAC24441.2| 441|Caenorhabditis elegans Seryl trna
synthetase protein 1 protein.
Length = 441
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 388 VEGWVPGRSLVEVKSTRNKCVLVERLRSSTKY 293
+E W+PGR L S+ + C + R KY
Sbjct: 345 IEAWMPGRKLYGEVSSASNCTDFQSRRLGIKY 376
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/85 (24%), Positives = 38/85 (44%)
Frame = +3
Query: 12 RLSTPFTIHLPKEAMTTSCTARRTTKKFASSTFMRRHSSNTSSKVTSRPSTKKLICTVAK 191
++S+ F P ++ T T T+ + ST + SS S VT PS+ +
Sbjct: 585 QMSSSFQPTAPT-SLGTIMTTPGTSSIPSISTSVNSGSSTIGSTVTQAPSSSTSMGPSPS 643
Query: 192 QSTLWATTGRRTPIYSKKTSSNSTS 266
QST +T P+ S +++ ++
Sbjct: 644 QSTAGSTMTSAPPVTSSSSANTGST 668
>AB016796-1|BAA74732.1| 441|Caenorhabditis elegans Seryl-tRNA
synthetase protein.
Length = 441
Score = 27.1 bits (57), Expect = 8.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 388 VEGWVPGRSLVEVKSTRNKCVLVERLRSSTKY 293
+E W+PGR L S+ + C + R KY
Sbjct: 345 IEAWMPGRKLYGEVSSASNCTDFQSRRLGIKY 376
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,098,166
Number of Sequences: 27780
Number of extensions: 214842
Number of successful extensions: 852
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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