Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30209
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124; Eukar... 206 2e-52
UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17; Eukary... 184 1e-45
UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5; Dikarya... 155 7e-37
UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18, putat... 145 5e-34
UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8; Trypano... 140 2e-32
UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8; Eukaryo... 139 3e-32
UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal ... 137 1e-31
UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135, w... 136 3e-31
UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia lam... 128 1e-28
UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S r... 127 1e-28
UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, who... 126 3e-28
UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1; ... 122 4e-27
UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal ... 98 9e-20
UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L1... 92 6e-18
UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, wh... 71 2e-11
UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1; ... 71 2e-11
UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal ... 68 1e-10
UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1; Encepha... 66 3e-10
UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillar... 53 3e-06
UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 47 2e-04
UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7; Thermo... 43 0.005
UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2; Thermoprot... 39 0.059
UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1; ... 39 0.078
UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1; Methano... 38 0.18
UniRef50_Q6ZRL6 Cluster: CDNA FLJ46261 fis, clone TESTI4025062; ... 36 0.72
UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S riboso... 35 0.96
UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12; Archa... 34 1.7
UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured... 34 2.2
UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering ... 33 2.9
UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2; Methano... 33 2.9
UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,... 33 3.9
UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16; Eurya... 33 3.9
UniRef50_UPI000023CCCF Cluster: hypothetical protein FG07400.1; ... 33 5.1
UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome s... 33 5.1
UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse tran... 33 5.1
UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putativ... 32 6.8
UniRef50_Q4UCQ7 Cluster: Putative uncharacterized protein; n=2; ... 32 6.8
UniRef50_Q22W77 Cluster: EGF-like domain containing protein; n=1... 32 6.8
UniRef50_Q5ATD3 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_UPI00005A2BBE Cluster: PREDICTED: similar to Protection... 32 8.9
UniRef50_Q0VR85 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_O59301 Cluster: Putative uncharacterized protein PH1635... 32 8.9
>UniRef50_Q07020 Cluster: 60S ribosomal protein L18; n=124;
Eukaryota|Rep: 60S ribosomal protein L18 - Homo sapiens
(Human)
Length = 188
Score = 206 bits (504), Expect = 2e-52
Identities = 101/169 (59%), Positives = 120/169 (71%)
Frame = +3
Query: 3 INHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVS 182
I H DRKVRR E KSQDI TN+ FNQ+VL+RLFMSR NRPP+S+S
Sbjct: 5 IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLS 64
Query: 183 RLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFD 362
R+ R MK P RE AVVVGT+T+DVR+ ++PK+ V AL VT +AR+RIL AGG+ILTFD
Sbjct: 65 RMIRKMKLPGRENKTAVVVGTITDDVRVQEVPKLKVCALRVTSRARSRILRAGGKILTFD 124
Query: 363 QLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHE 509
QLAL +P G TVL+ G R RE RHFG APG P SHTKPYVR+KG +
Sbjct: 125 QLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRK 173
>UniRef50_O65729 Cluster: 60S ribosomal protein L18; n=17;
Eukaryota|Rep: 60S ribosomal protein L18 - Cicer
arietinum (Chickpea) (Garbanzo)
Length = 183
Score = 184 bits (447), Expect = 1e-45
Identities = 90/164 (54%), Positives = 117/164 (71%)
Frame = +3
Query: 18 DRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARH 197
++K +RT KS DI T++ FN ++L+RLFMS++NRPP+S+SRL ++
Sbjct: 8 NKKTKRTSPKSNDIYLKLLVKLYRFLVRRTDSNFNAVILKRLFMSKVNRPPLSLSRLIKY 67
Query: 198 MKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 377
M+ +EG I VVVG VT+D+R+Y +P + V AL TE ARARI AGGE LTFDQLALR
Sbjct: 68 MQG--KEGKIGVVVGAVTDDIRVYDVPTIKVTALKFTETARARIQKAGGECLTFDQLALR 125
Query: 378 APTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHE 509
P TVL++G +NAREAV+HFGPAPG P SHTKPYVR+KG +
Sbjct: 126 LPL-TDTVLLRGPKNAREAVKHFGPAPGVPHSHTKPYVRSKGRK 168
>UniRef50_P07279 Cluster: 60S ribosomal protein L18; n=5;
Dikarya|Rep: 60S ribosomal protein L18 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 186
Score = 155 bits (375), Expect = 7e-37
Identities = 80/173 (46%), Positives = 112/173 (64%), Gaps = 5/173 (2%)
Frame = +3
Query: 12 KHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLA 191
+H R RT KS ++ T+A FN++VL+ LF+S+INRPP+SVSR+A
Sbjct: 9 QHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRPPVSVSRIA 68
Query: 192 RHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLA 371
R +K+ VVVGTVT+D R+++ PK TVAAL T ARA+I+ AGGE +T DQLA
Sbjct: 69 RALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGECITLDQLA 128
Query: 372 LRAPTGKKTVLVQGQRNAREAVRHFGPAP---GAPR--SHTKPYVRTKGHEKA 515
+RAP G+ T++++G RN+REAVRHFG P APR S + + R +G ++
Sbjct: 129 VRAPKGQNTLILRGPRNSREAVRHFGMGPHKGKAPRILSTGRKFERARGRRRS 181
>UniRef50_Q7RPR6 Cluster: Eukaryotic ribosomal protein L18,
putative; n=4; Plasmodium (Vinckeia)|Rep: Eukaryotic
ribosomal protein L18, putative - Plasmodium yoelii
yoelii
Length = 243
Score = 145 bits (352), Expect = 5e-34
Identities = 70/135 (51%), Positives = 94/135 (69%)
Frame = +3
Query: 105 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 284
T+ FN+I+ +RL M + RPP+S+S+L +HM + +AVVVG++T+D RL+ M
Sbjct: 96 TDVNFNKIIAKRLIMPKRFRPPLSLSKLQQHMSN--NQNSVAVVVGSITDDKRLFSCRNM 153
Query: 285 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGA 464
V AL TE AR RI+ AGGE LTFDQLALR PTGK +L++G AR A +HFG APG
Sbjct: 154 KVCALRFTETARKRIVDAGGECLTFDQLALRYPTGKDCILLRGPTKARTAEKHFGSAPGR 213
Query: 465 PRSHTKPYVRTKGHE 509
P+S +PYVR+KG +
Sbjct: 214 PKSKARPYVRSKGRK 228
>UniRef50_Q4QG98 Cluster: 60S ribosomal protein L18; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L18 -
Leishmania major
Length = 198
Score = 140 bits (339), Expect = 2e-32
Identities = 74/141 (52%), Positives = 99/141 (70%), Gaps = 6/141 (4%)
Frame = +3
Query: 105 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKP------TREGLIAVVVGTVTNDVRL 266
T++ FN++V +RL SR NR PIS+SR+A MK+ ++ IAVVVG V +DVR+
Sbjct: 40 TSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMKRKAVFTAKSKAAPIAVVVGDVLDDVRM 99
Query: 267 YKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHF 446
+IP M V AL ++ AR I+AAGGE LTFDQLA+ APTGK T L++G+++ RE+VRHF
Sbjct: 100 ARIPAMRVCALRFSKSARQSIVAAGGECLTFDQLAMIAPTGKNTYLLRGRKSGRESVRHF 159
Query: 447 GPAPGAPRSHTKPYVRTKGHE 509
G A G P SH+KPY +G E
Sbjct: 160 G-ASGVPGSHSKPYATNRGKE 179
>UniRef50_Q4N438 Cluster: 60S ribosomal protein L18; n=8;
Eukaryota|Rep: 60S ribosomal protein L18 - Theileria
parva
Length = 184
Score = 139 bits (337), Expect = 3e-32
Identities = 71/135 (52%), Positives = 97/135 (71%)
Frame = +3
Query: 105 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 284
T+ FN++VL+RL M R + P+S+S+L++HM+K R AVVVGTVTND R+ +PK+
Sbjct: 40 TDHSFNKVVLKRLLMPRRFKAPLSLSKLSKHMEK--RPDNTAVVVGTVTNDERMDVVPKL 97
Query: 285 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGA 464
+V AL VTE AR RILA+GGE+LTFDQL R+PTG + L++G AREAV+HF
Sbjct: 98 SVCALRVTETARKRILASGGEVLTFDQLVARSPTGSRCTLLRGATKAREAVKHF---RNE 154
Query: 465 PRSHTKPYVRTKGHE 509
+ + KPYVR+KG +
Sbjct: 155 VKGNPKPYVRSKGRK 169
>UniRef50_UPI0000E4A07F Cluster: PREDICTED: similar to ribosomal
protein L18, partial; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to ribosomal protein
L18, partial - Strongylocentrotus purpuratus
Length = 354
Score = 137 bits (332), Expect = 1e-31
Identities = 65/112 (58%), Positives = 88/112 (78%)
Frame = +3
Query: 105 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 284
TNAKFN IVL+RLFMSR N+ +S++R+ R M K REG AVVVG +T+DVR++K+PK+
Sbjct: 9 TNAKFNNIVLKRLFMSRSNKAAMSLARVVRFMNKDGREGKTAVVVGCITDDVRIHKLPKL 68
Query: 285 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVR 440
+ AL VT +ARARI+ AGGEI+TFDQLAL++P G+ TVL+QG ++ + R
Sbjct: 69 KICALRVTARARARIIKAGGEIITFDQLALQSPKGQNTVLMQGFKSETDMER 120
>UniRef50_A0BXY7 Cluster: Chromosome undetermined scaffold_135,
whole genome shotgun sequence; n=3; Eukaryota|Rep:
Chromosome undetermined scaffold_135, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 393
Score = 136 bits (329), Expect = 3e-31
Identities = 71/129 (55%), Positives = 89/129 (68%)
Frame = +3
Query: 105 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 284
T+++FN VLRRL +R R PISVSRL + + + VVVGTVT+D RL +PK+
Sbjct: 255 TDSQFNATVLRRLQSTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDARLLTVPKL 314
Query: 285 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGA 464
V AL TE AR RILAAGG+ LTFDQLA + PTG T+L++G + REA++HFG A G
Sbjct: 315 NVCALRFTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPK-VREALKHFGRAAGL 373
Query: 465 PRSHTKPYV 491
P SH KPYV
Sbjct: 374 PGSHAKPYV 382
>UniRef50_Q7QQK8 Cluster: Ribosomal protein L18; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L18 - Giardia
lamblia ATCC 50803
Length = 179
Score = 128 bits (308), Expect = 1e-28
Identities = 73/165 (44%), Positives = 93/165 (56%)
Frame = +3
Query: 21 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 200
RKV R E KS + T F +++ +RL +S+ NRP +SVSRLA M
Sbjct: 12 RKVERKEPKSPNPYIRLLHNAFKVVYENTGEDFTKVLTKRLCLSKTNRPVLSVSRLAHLM 71
Query: 201 KKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRA 380
K RE IAVV TVTND RL IP+MT+ AL + AR+RI AGG ++FD+L
Sbjct: 72 HK--REDKIAVVASTVTNDERLVTIPRMTICALKFSATARSRIEKAGGRCMSFDELLAEK 129
Query: 381 PTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHEKA 515
PTG VL+QG+R+ R + FG +PG P SH KP KG A
Sbjct: 130 PTGDNCVLLQGRRSCRAVCKKFG-SPGRPNSHVKPKGEHKGRRGA 173
>UniRef50_A4D0W6 Cluster: Similar to ribosomal protein L18; 60S
ribosomal protein L18; n=2; Homo sapiens|Rep: Similar to
ribosomal protein L18; 60S ribosomal protein L18 - Homo
sapiens (Human)
Length = 224
Score = 127 bits (307), Expect = 1e-28
Identities = 62/117 (52%), Positives = 81/117 (69%)
Frame = +3
Query: 159 NRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAA 338
N+PP+S+SR+ MK P +E AVVVGT+T+DV + ++PK+ V AL VT +AR+ I+
Sbjct: 93 NQPPLSLSRMIPKMKLPGQENKTAVVVGTITDDVWVQEVPKLKVCALGVTSRARSHIVRV 152
Query: 339 GGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKGHE 509
GG+ LTFDQLAL +P TVL+ G R RE HF A G P SHTKPYVR+KG +
Sbjct: 153 GGKNLTFDQLALDSPKVCSTVLLSGPRKGREVYWHFDKALGTPHSHTKPYVRSKGRK 209
>UniRef50_A0ED68 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=6; Eukaryota|Rep: Chromosome
undetermined scaffold_9, whole genome shotgun sequence -
Paramecium tetraurelia
Length = 469
Score = 126 bits (304), Expect = 3e-28
Identities = 70/129 (54%), Positives = 86/129 (66%)
Frame = +3
Query: 105 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 284
T++ FN VLRRL +R R PISVSRL + + + VVVGTVT+DVRL +PK+
Sbjct: 335 TDSNFNATVLRRLQQTRTARYPISVSRLVKQINTAKDKTRTLVVVGTVTDDVRLLTVPKI 394
Query: 285 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGA 464
V TE AR RILAAGG+ LTFDQLA + PTG T+L++G R RE ++HFG A G
Sbjct: 395 KV----FTETARKRILAAGGKTLTFDQLAQQNPTGTGTILLRGPR-VREELKHFGRAAGL 449
Query: 465 PRSHTKPYV 491
P SH KPYV
Sbjct: 450 PGSHAKPYV 458
>UniRef50_UPI0000498BAB Cluster: 60S ribosomal protein L18; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L18 - Entamoeba histolytica HM-1:IMSS
Length = 168
Score = 122 bits (295), Expect = 4e-27
Identities = 64/115 (55%), Positives = 82/115 (71%)
Frame = +3
Query: 105 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 284
T +KF + +L RL +SR+NRP +S S+LA MKK E AV V TVT D R Y +PKM
Sbjct: 39 TQSKFAKTILHRLCLSRVNRPIVSTSKLACLMKKHPEE--TAVCVNTVTYDSR-YPVPKM 95
Query: 285 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG 449
V AL T+ A A I AGG+ L FD+LAL+APTG+KTVL++G+RN REA++HFG
Sbjct: 96 NVCALKFTKTAEAAITKAGGKCLRFDELALKAPTGRKTVLIRGKRNVREALKHFG 150
>UniRef50_UPI0000F2DC1A Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L18 - Monodelphis domestica
Length = 184
Score = 98.3 bits (234), Expect = 9e-20
Identities = 49/113 (43%), Positives = 71/113 (62%)
Frame = +3
Query: 165 PPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGG 344
PP+ +SR+ R MK E A V+GTVT+++R+ +PK+ V+AL VT AR+RIL A G
Sbjct: 47 PPLPLSRMIRKMKLEGTENKTAAVMGTVTDNIRIQDVPKLKVSALRVTSNARSRILKANG 106
Query: 345 EILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPYVRTKG 503
+IL+FDQLA+ +P +G + + RH G G+P S+ KPYV + G
Sbjct: 107 KILSFDQLAMTSP--------KGPQKCYQGYRHLGKVSGSPHSYAKPYVGSTG 151
>UniRef50_UPI000050E205 Cluster: 60S ribosomal subunit protein L18;
n=1; Theileria annulata strain Ankara|Rep: 60S ribosomal
subunit protein L18 - Theileria annulata strain Ankara
Length = 222
Score = 92.3 bits (219), Expect = 6e-18
Identities = 45/86 (52%), Positives = 61/86 (70%)
Frame = +3
Query: 252 NDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNARE 431
+D R+ +PK++V AL VTE AR RILA+GGE+LTFDQL R+P G K L++G+ ARE
Sbjct: 125 DDERMDVVPKLSVCALRVTETARKRILASGGEVLTFDQLVARSPIGGKCTLLRGETKARE 184
Query: 432 AVRHFGPAPGAPRSHTKPYVRTKGHE 509
AV+HF + + KPYVR+KG +
Sbjct: 185 AVKHF---RNEVKGNPKPYVRSKGRK 207
Score = 56.4 bits (130), Expect = 4e-07
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = +3
Query: 105 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 284
T+ FN+IVL+RL M R + P+S+S+L++HM+ +R AVV+GTVT+ L IP
Sbjct: 40 TDFPFNKIVLKRLLMPRRYKAPLSLSKLSKHME--SRPNNTAVVIGTVTSTESLGMIPST 97
Query: 285 TVAALHVT 308
TV + VT
Sbjct: 98 TVTLVLVT 105
>UniRef50_A7Q837 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 421
Score = 70.5 bits (165), Expect = 2e-11
Identities = 37/103 (35%), Positives = 59/103 (57%)
Frame = +3
Query: 21 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 200
+K + T KS DI T +KFN + L+R FMS++N+ P+ +SRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 201 KKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 329
++G I VV+G+VT+D+R+Y++ + V L T++ R I
Sbjct: 72 --DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_A5BN99 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 271
Score = 70.5 bits (165), Expect = 2e-11
Identities = 37/103 (35%), Positives = 59/103 (57%)
Frame = +3
Query: 21 RKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVSRLARHM 200
+K + T KS DI T +KFN + L+R FMS++N+ P+ +SRL R M
Sbjct: 12 KKTKCTAPKSDDIYLKLTVKLYHFLVRKTGSKFNVVTLKRFFMSKVNKLPLLLSRLVRFM 71
Query: 201 KKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARI 329
++G I VV+G+VT+D+R+Y++ + V L T++ R I
Sbjct: 72 --DGKKGKIVVVIGSVTDDLRVYEVLYLKVTILRFTKRVREGI 112
>UniRef50_UPI000155D3ED Cluster: PREDICTED: similar to ribosomal
protein L18; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein L18 -
Ornithorhynchus anatinus
Length = 188
Score = 67.7 bits (158), Expect = 1e-10
Identities = 32/62 (51%), Positives = 40/62 (64%)
Frame = +3
Query: 3 INHKHDRKVRRTEVKSQDIXXXXXXXXXXXXXXXTNAKFNQIVLRRLFMSRINRPPISVS 182
I H DRKVRR E KSQDI TN+ FN++VL+RLFMSR NRPP+++S
Sbjct: 114 IRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSSFNKVVLKRLFMSRTNRPPLALS 173
Query: 183 RL 188
R+
Sbjct: 174 RM 175
>UniRef50_Q8SS76 Cluster: 60S RIBOSOMAL PROTEIN L18; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L18
- Encephalitozoon cuniculi
Length = 200
Score = 66.5 bits (155), Expect = 3e-10
Identities = 40/128 (31%), Positives = 65/128 (50%)
Frame = +3
Query: 129 VLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVT 308
+ +RL MS+ +R P+ +S++ + + + +AVVV V +D + IP + V AL +
Sbjct: 52 ISKRLKMSKSDRQPVKISKIVSEIGESKDK--VAVVVAKVLDDDEVMVIPAVKVVALQWS 109
Query: 309 EKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFGPAPGAPRSHTKPY 488
+ + +I GG I T DQL P LV + +R + + +GPAPG S T P
Sbjct: 110 KGVKEKIERYGGTIGTLDQLFELCPNMDDICLVSTNKFSRRSAKFWGPAPGEKGSTTYPR 169
Query: 489 VRTKGHEK 512
K H +
Sbjct: 170 ANQKCHNR 177
>UniRef50_Q98RU3 Cluster: 60s ribosomal protein L18; n=1; Guillardia
theta|Rep: 60s ribosomal protein L18 - Guillardia theta
(Cryptomonas phi)
Length = 167
Score = 53.2 bits (122), Expect = 3e-06
Identities = 28/102 (27%), Positives = 57/102 (55%)
Frame = +3
Query: 114 KFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVA 293
KF + ++RR SR +R IS+S+L + K T + ++ V + ND R+ K PK+ +
Sbjct: 67 KFLKELIRRTNSSRKSRSVISLSKLIKFSLKDTTKSILTV--SKILNDERISKTPKLKIF 124
Query: 294 ALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQGQR 419
AL+ + + +I+ GG+I +++ + K + ++G++
Sbjct: 125 ALNFSSSVKKKIIENGGQIFKLNEIKVDDFLNMKILFIRGKK 166
>UniRef50_Q6CXL9 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 186
Score = 47.2 bits (107), Expect = 2e-04
Identities = 31/119 (26%), Positives = 59/119 (49%)
Frame = -2
Query: 455 SRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLR 276
+ +V+ + S T +L S+ SQLI+S F++S Q+ +SS+ L
Sbjct: 52 TETEVSSSFSGSSWTSDDQGVLTLWSSNSQLIQSDGFTTSLQDLSLGTSSESQSSNGGLW 111
Query: 275 YLVQSHVICDCPHYHGNQTLTSWLLHVARQTRHRDWWPVDTAHKEPA*NDLIEFGICTS 99
S VI + + +++LL +R + +R+WW VD ++ ++L+E+ I T+
Sbjct: 112 EFKDSVVIGNSTNNDNGLLSSTFLLQGSRDSGNRNWWSVDLGQEQRLQDNLVEWSISTT 170
>UniRef50_Q8ZYQ2 Cluster: 50S ribosomal protein L18e; n=7;
Thermoprotei|Rep: 50S ribosomal protein L18e -
Pyrobaculum aerophilum
Length = 122
Score = 42.7 bits (96), Expect = 0.005
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = +3
Query: 198 MKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAGGEILTFDQLALR 377
+ + +EG + VV G + +L K K+ VAA+ ++ KA +++ AGGE+LT +L +
Sbjct: 54 LNRVAKEGDVVVVPGKLLAGGQLNK--KIIVAAVKISPKAARKVIEAGGEVLTIPELVRK 111
Query: 378 APTGKKTVLV 407
P G +V
Sbjct: 112 YPRGSGVRIV 121
>UniRef50_A0RXP6 Cluster: Ribosomal protein L18E; n=2;
Thermoprotei|Rep: Ribosomal protein L18E - Cenarchaeum
symbiosum
Length = 126
Score = 39.1 bits (87), Expect = 0.059
Identities = 24/82 (29%), Positives = 45/82 (54%)
Frame = +3
Query: 162 RPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVTEKARARILAAG 341
R ++++++AR+ T+EG + VV G V + K+T+ ++ A ++L++G
Sbjct: 50 RRTLNLNKIARY----TKEGDVVVVPGRVLGTGSMPH--KITLCPFGISGAAAEKVLSSG 103
Query: 342 GEILTFDQLALRAPTGKKTVLV 407
G + F +L PTGK VL+
Sbjct: 104 GRVTGFAELTKEFPTGKGVVLL 125
>UniRef50_Q5ANC1 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 123
Score = 38.7 bits (86), Expect = 0.078
Identities = 26/64 (40%), Positives = 34/64 (53%)
Frame = -3
Query: 346 SPPAAKMRARAFSVT*RAATVIFGILYSLTSFVTVPTTTAIKPSRVGFFMWRAKRDTEIG 167
SPP K+ + A +V +AA V FG + S VTVPTTT + + F +TE G
Sbjct: 3 SPPFFKISSLAPAVNLKAAIVAFGNSNNSLSSVTVPTTTMVFSAAPFCFKALEILETETG 62
Query: 166 GRLI 155
G LI
Sbjct: 63 GSLI 66
>UniRef50_A6UW02 Cluster: 50S ribosomal protein L15; n=1;
Methanococcus aeolicus Nankai-3|Rep: 50S ribosomal
protein L15 - Methanococcus aeolicus Nankai-3
Length = 120
Score = 37.5 bits (83), Expect = 0.18
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +3
Query: 120 NQIVLRRLFMSRINRPPISVSRL-ARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAA 296
N + + + R+++P +S + + + T E + VV G V +L K+TVAA
Sbjct: 25 NDVKIWKDLAKRLSKPSRIISEVNVSRLNRYTEENHVVVVPGKVLGSGKLAH--KITVAA 82
Query: 297 LHVTEKARARILAAGGEILTFDQLALRAPTG 389
+E A+ + AGG +T +L P G
Sbjct: 83 FSFSEGAKKAVEEAGGRCITIKELINENPKG 113
>UniRef50_Q6ZRL6 Cluster: CDNA FLJ46261 fis, clone TESTI4025062;
n=2; Homo sapiens|Rep: CDNA FLJ46261 fis, clone
TESTI4025062 - Homo sapiens (Human)
Length = 280
Score = 35.5 bits (78), Expect = 0.72
Identities = 30/102 (29%), Positives = 39/102 (38%), Gaps = 9/102 (8%)
Frame = +2
Query: 227 CRGSGDSHK*RETVQDTEDDGGCSSCYRKSSCTHFGCWRRNSYF-----*SAGSSCSDWQ 391
CR SG S R CS +S T CW + F S+G+S +
Sbjct: 30 CRSSGTSSTSRSWWSSGTSSTSCSWWSSGTSSTFCSCWSSGTSFTSCSCWSSGTSSTPCS 89
Query: 392 EDSTGTRSAKC----S*GSASLWPCSRSTALSH*TLCSHQGT 505
S+GT S C S S++ W C S S +C GT
Sbjct: 90 CRSSGTSSTSCSCWSSGTSSTSWSCKSSGTSSTCYMCLSSGT 131
>UniRef50_UPI0000DA3F07 Cluster: PREDICTED: similar to 60S ribosomal
protein L18; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L18 - Rattus norvegicus
Length = 112
Score = 35.1 bits (77), Expect = 0.96
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 186 LARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAAL 299
+ + MK P E AVVVG VT+DVR+ ++ ++ V AL
Sbjct: 1 MIQKMKLPGWENKTAVVVGMVTDDVRILEVHRLKVCAL 38
>UniRef50_Q8TVB7 Cluster: 50S ribosomal protein L18e; n=12;
Archaea|Rep: 50S ribosomal protein L18e - Methanopyrus
kandleri
Length = 127
Score = 34.3 bits (75), Expect = 1.7
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Frame = +3
Query: 108 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPT-REGLIAVVVGTVTNDVRLYKIPKM 284
NA + V RL R R ++V +L ++ +E +V G V D + + +
Sbjct: 28 NAPVWRDVAERLSRPRRQRAEVNVGKLDGLARRGVIQEEETVLVPGKVLGDGVITQ--PL 85
Query: 285 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 410
VAA + AR +I AAGGE LT +L P G +++
Sbjct: 86 RVAAWRFSRTARMKIEAAGGECLTIRELLEENPEGSYIRIIE 127
>UniRef50_Q2Q0G4 Cluster: Ribosomal protein L18E; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L18E -
uncultured organism HF70_19B12
Length = 121
Score = 33.9 bits (74), Expect = 2.2
Identities = 32/96 (33%), Positives = 45/96 (46%)
Frame = +3
Query: 105 TNAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKM 284
T A + V RL SR N ++SRL+R E +V G + + P
Sbjct: 26 TGAALWRDVALRLETSRSNWAEPNLSRLSR----TAGEDETILVPGKLLGSGDVIGSP-- 79
Query: 285 TVAALHVTEKARARILAAGGEILTFDQLALRAPTGK 392
+VAA V+ AR++I AAGG ++T L P GK
Sbjct: 80 SVAAYSVSAGARSKIEAAGGRVMTIRDLMNDNPNGK 115
>UniRef50_UPI0000E4A0C9 Cluster: PREDICTED: similar to tethering
factor SEC34; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to tethering factor SEC34 -
Strongylocentrotus purpuratus
Length = 781
Score = 33.5 bits (73), Expect = 2.9
Identities = 17/63 (26%), Positives = 37/63 (58%)
Frame = -2
Query: 452 RAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRY 273
+A+ CL+ +LTL + + + +Q + K+ +S+S+NA T F+G +S+ ++
Sbjct: 198 QARFKQCLSK-ALTLIKAAVFTILNGATQQVVPKDVTSTSENAFTLFYGKFRSNAPKIKA 256
Query: 272 LVQ 264
L++
Sbjct: 257 LME 259
>UniRef50_A5UN56 Cluster: 50S ribosomal protein L15; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L15 -
Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM
861)
Length = 121
Score = 33.5 bits (73), Expect = 2.9
Identities = 27/101 (26%), Positives = 49/101 (48%)
Frame = +3
Query: 108 NAKFNQIVLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMT 287
NA + V RL S +++S +AR+ +V G V ++ L + K+
Sbjct: 27 NAAIWKDVANRLGRSNRRTAEVNLSDIARYANADET----VLVPGKVLSNGDLTE--KVN 80
Query: 288 VAALHVTEKARARILAAGGEILTFDQLALRAPTGKKTVLVQ 410
VAA ++KA+ +I +AGGE ++ D + P G +++
Sbjct: 81 VAAFKFSQKAQEKIESAGGECVSIDDIMESNPKGSNIRIME 121
>UniRef50_UPI0000D56F37 Cluster: PREDICTED: similar to CG4917-PA,
isoform A; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to CG4917-PA, isoform A - Tribolium castaneum
Length = 838
Score = 33.1 bits (72), Expect = 3.9
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 349 FLLLISWLFVLRLARRQYWYKVSEMLVRQCVTLALLQ 459
FL + L ++++A RQ W +ML+ CVTL+ LQ
Sbjct: 455 FLYMFIPLLLVKIASRQDWKGTYQMLIPHCVTLSWLQ 491
>UniRef50_Q8PW46 Cluster: 50S ribosomal protein L18e; n=16;
Euryarchaeota|Rep: 50S ribosomal protein L18e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 126
Score = 33.1 bits (72), Expect = 3.9
Identities = 26/87 (29%), Positives = 44/87 (50%)
Frame = +3
Query: 129 VLRRLFMSRINRPPISVSRLARHMKKPTREGLIAVVVGTVTNDVRLYKIPKMTVAALHVT 308
+ +RL N +++S++ RH T E + +V G V L P +TVAA+ +
Sbjct: 39 IAKRLEAPSRNYAAVNISKINRH----TAENDVLLVPGKVLG-AGLLDHP-VTVAAVTFS 92
Query: 309 EKARARILAAGGEILTFDQLALRAPTG 389
E A +I AGG+ L+ +++ P G
Sbjct: 93 ESAVEKITEAGGKCLSVEEIMEANPKG 119
>UniRef50_UPI000023CCCF Cluster: hypothetical protein FG07400.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07400.1 - Gibberella zeae PH-1
Length = 333
Score = 32.7 bits (71), Expect = 5.1
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Frame = +3
Query: 312 KARARILAAGGEILTFDQLALRAPTGKKTVLVQGQRNAREAVRHFG----PAPGAPRSHT 479
KA +R G L AP G K Q+N R+ ++ G P P PRS +
Sbjct: 48 KAASRSTNIPGLTLAQSGAPENAPRGPKNGQADSQQNVRKGIKRKGKRHPPEPRKPRSES 107
Query: 480 KPYVRTKG 503
P V +KG
Sbjct: 108 PPKVPSKG 115
>UniRef50_Q4RHJ6 Cluster: Chromosome 19 SCAF15045, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 19
SCAF15045, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 598
Score = 32.7 bits (71), Expect = 5.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -2
Query: 458 WSRAKVTHCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQ 330
W K T +I+LT Q+CLL R+T + NF+ SS+
Sbjct: 73 WKYFKYTMAPYTIALTPEQHCLLGLRNTGEHFCSTSNFARSSK 115
>UniRef50_Q06035 Cluster: Gag,protease,endonuclease, reverse
transcriptase,RNaseH; n=6; Volvox carteri|Rep:
Gag,protease,endonuclease, reverse transcriptase,RNaseH -
Volvox carteri
Length = 1462
Score = 32.7 bits (71), Expect = 5.1
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = +3
Query: 114 KFNQIVLRRLFMSRINRPPI--SVSRLARHMKKPTRE------GLIAVVVGTVTNDVRLY 269
+F +++ L++S RP I SV LARHM KPT E G++ + GT + +
Sbjct: 1244 RFGELIGSLLYLSVGTRPDIAYSVGALARHMSKPTVEHWQAAKGVVRYIAGTA--GLGIV 1301
Query: 270 KIPKMTVAALH 302
PK + +LH
Sbjct: 1302 FSPKSSNPSLH 1312
>UniRef50_Q0SUG4 Cluster: CRISPR-associated protein Csx8, putative;
n=1; Clostridium perfringens SM101|Rep:
CRISPR-associated protein Csx8, putative - Clostridium
perfringens (strain SM101 / Type A)
Length = 447
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = -2
Query: 368 QLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYLVQ 264
+L KS +F +S+N T+ FGNMK S ++ + V+
Sbjct: 220 ELKKSNSFIENSENTRTTLFGNMKESAEYIGFDVE 254
>UniRef50_Q4UCQ7 Cluster: Putative uncharacterized protein; n=2;
Theileria|Rep: Putative uncharacterized protein -
Theileria annulata
Length = 1007
Score = 32.3 bits (70), Expect = 6.8
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = -2
Query: 440 THCLTSISLTLYQYCLLASRSTKSQLIKSKNFSSSSQNACTSFFGNMKSSHRHLRYL 270
+HC + I LT Q CL S S L +F +SS F N + +R+ YL
Sbjct: 598 SHCCSKIPLTTLQECLEKSSSYGEALTDLNSFPNSSTIHLAFIFKNFLNVNRYKYYL 654
>UniRef50_Q22W77 Cluster: EGF-like domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: EGF-like domain
containing protein - Tetrahymena thermophila SB210
Length = 2328
Score = 32.3 bits (70), Expect = 6.8
Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Frame = +2
Query: 113 QIQSDRSTPALYEPYQPATNLCVSFGAPHEEANS*GFDCRGSGDSHK*RETVQDTEDDGG 292
Q+Q D S + + Y P+TN C+S AP++ + C+ S T +D +
Sbjct: 702 QLQPDNSCACVNQVYDPSTNKCISC-APNQVYDPINKICQNCNPS---CSTCKDASNLNT 757
Query: 293 CSSCYRKSSCTHFGCWRR--NSYF*SAGSSC 379
C+SC + C SYF A C
Sbjct: 758 CTSCPTGKVLYNGNCQDSCPQSYFADANKVC 788
>UniRef50_Q5ATD3 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 575
Score = 32.3 bits (70), Expect = 6.8
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +1
Query: 355 LLISWLFVLRLARRQYWYKVSEMLVRQCVTLALLQEHRALTLNPMFAPRDMKKQ 516
+L S + LR ++ +K++ +RQC+ L + HR L LN A +M+K+
Sbjct: 203 ILCSATYSLRSSKGTSHWKLAGQALRQCINLGYHRNHRRLGLNVSPAQVEMQKR 256
>UniRef50_A1DA31 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus
fischerianus (strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 306
Score = 32.3 bits (70), Expect = 6.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 191 RQTRHRDWWPVDTAHKEP 138
RQ+ DWWP D HKEP
Sbjct: 179 RQSTKPDWWPSDVPHKEP 196
>UniRef50_UPI00005A2BBE Cluster: PREDICTED: similar to Protection of
telomeres 1 (hPot1) (POT1-like telomere end-binding
protein); n=4; Mammalia|Rep: PREDICTED: similar to
Protection of telomeres 1 (hPot1) (POT1-like telomere
end-binding protein) - Canis familiaris
Length = 942
Score = 31.9 bits (69), Expect = 8.9
Identities = 19/41 (46%), Positives = 21/41 (51%)
Frame = +2
Query: 377 CSDWQEDSTGTRSAKCS*GSASLWPCSRSTALSH*TLCSHQ 499
C QEDS T S+K S GS SL+ R LS L HQ
Sbjct: 609 CHSEQEDSLRTLSSKDSSGSVSLYEIERCQQLSATILTDHQ 649
>UniRef50_Q0VR85 Cluster: Putative uncharacterized protein; n=1;
Alcanivorax borkumensis SK2|Rep: Putative
uncharacterized protein - Alcanivorax borkumensis
(strain SK2 / ATCC 700651 / DSM 11573)
Length = 197
Score = 31.9 bits (69), Expect = 8.9
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -2
Query: 269 VQSHVICDCPHYHGNQTLTSWLLHVARQTRH 177
+ + + DCP++H Q L WL H+ + R+
Sbjct: 139 INASKVQDCPYFHYQQQLAQWLHHLDEEARY 169
>UniRef50_O59301 Cluster: Putative uncharacterized protein PH1635;
n=1; Pyrococcus horikoshii|Rep: Putative uncharacterized
protein PH1635 - Pyrococcus horikoshii
Length = 148
Score = 31.9 bits (69), Expect = 8.9
Identities = 24/59 (40%), Positives = 32/59 (54%)
Frame = -3
Query: 391 LPVGARRAS*SKVRISPPAAKMRARAFSVT*RAATVIFGILYSLTSFVTVPTTTAIKPS 215
LP+G S S V SPPA+ + A S+ AAT+ F +L + T+P TT I PS
Sbjct: 20 LPLGFLSMSSSIVIASPPASVIFFLAVSLNFHAATMTF--FSNLPAPRTLPGTTIISPS 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 549,709,102
Number of Sequences: 1657284
Number of extensions: 11634913
Number of successful extensions: 34828
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 33582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34782
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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