Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30206
         (369 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.25 
AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine 3-mon...    22   2.3  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   2.3  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   2.3  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    20   7.0  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    20   9.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.0 bits (52), Expect = 0.25
 Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
 Frame = +2

Query: 26   SAECPPDQYDPGP-NCAFETICALRSAHSNRKHYC 127
            S  C P QY P P NC     C L      RK YC
Sbjct: 1100 SQPCEPGQYVPDPHNCNAYYRCVLGEL---RKQYC 1131


>AY052624-1|AAL15472.1|  212|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 212

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 230 DLITVRAYR*CNFLCEILNKC 292
           DL+T  +YR   F  E+L KC
Sbjct: 135 DLVTRPSYRLRKFFDELLFKC 155


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 230 DLITVRAYR*CNFLCEILNKC 292
           DL+T  +YR   F  E+L KC
Sbjct: 368 DLVTRPSYRLRKFFDELLFKC 388


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 230 DLITVRAYR*CNFLCEILNKC 292
           DL+T  +YR   F  E+L KC
Sbjct: 368 DLVTRPSYRLRKFFDELLFKC 388


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 31  GMSTGPIRSGSKLRLRDNLCITKRTL 108
           G +TG +R  S    R  L   KRT+
Sbjct: 169 GGTTGKLRRRSTAASRSRLAAFKRTI 194


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +2

Query: 101 AHSNRKHYCDCWCKP 145
           A+S    YCD W  P
Sbjct: 26  AYSPPPSYCDPWYNP 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,524
Number of Sequences: 336
Number of extensions: 1691
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7616520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)