Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30206
         (369 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247           29   1.5  
10_02_0060 - 4808506-4808535,4808564-4809588,4810125-4810292,481...    28   2.6  
07_03_1503 + 27017933-27018063,27019668-27019727,27019996-270201...    27   4.6  
04_01_0475 - 6196747-6197065,6197193-6197236,6198649-6198721,619...    27   6.1  
12_02_0281 + 16744690-16744727,16744744-16745611,16746195-167467...    26   8.1  
03_05_0484 + 24808817-24809620,24810263-24810567,24811363-24812389     26   8.1  

>10_01_0083 - 1046086-1047086,1047976-1048161,1048266-1049247
          Length = 722

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 86  CALRSAHSNRKHYCDCWCKPGLIRDSIAHKCVKECPKYDEIL 211
           C+      NR    DC CKPG+  D  A  C ++ P   +++
Sbjct: 347 CSSDGICKNRPGGYDCPCKPGMKGDGKAGTCTEKFPLVAKVI 388


>10_02_0060 -
           4808506-4808535,4808564-4809588,4810125-4810292,
           4811202-4811652
          Length = 557

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = +2

Query: 65  NCAFETICALRSAHSNRKHYCDCWCKPGLIRDSIAHKCVKECP 193
           NC+F ++C       NR    DC CK G+  D     C +  P
Sbjct: 163 NCSFNSVCV------NRPGGFDCPCKRGMTGDGKRGTCTENFP 199


>07_03_1503 +
           27017933-27018063,27019668-27019727,27019996-27020101,
           27020254-27020325,27021008-27021061,27021707-27021856,
           27022206-27022547,27022651-27024684,27024706-27024947,
           27025658-27026235,27026329-27028183,27028533-27028851,
           27028980-27029417
          Length = 2126

 Score = 27.1 bits (57), Expect = 4.6
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +2

Query: 14  EGINSAECPPDQYDPGPNCAFETI 85
           E +N+   PPD Y   PNC  ET+
Sbjct: 59  EPLNNKLGPPDYYPQTPNCPEETL 82


>04_01_0475 -
           6196747-6197065,6197193-6197236,6198649-6198721,
           6198823-6198933,6199023-6199196,6199285-6199466
          Length = 300

 Score = 26.6 bits (56), Expect = 6.1
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +3

Query: 105 TQTGNTTVTAGASLAS*GTLSLTNV*KNARNTMKFWTSYI 224
           T+  +T  TAGAS  S    S TN+  N   TMK +  Y+
Sbjct: 253 TEAASTDSTAGASGTSSAGASGTNIDSNYYVTMKGYMEYM 292


>12_02_0281 +
           16744690-16744727,16744744-16745611,16746195-16746725,
           16747737-16748549
          Length = 749

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 189 ARNTMKFWTSYIIPISLLFGRIDDVI 266
           AR  ++F T+YI P S +FGR + VI
Sbjct: 180 ARIALQFRTAYIAPSSRVFGRGELVI 205


>03_05_0484 + 24808817-24809620,24810263-24810567,24811363-24812389
          Length = 711

 Score = 26.2 bits (55), Expect = 8.1
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +3

Query: 189 ARNTMKFWTSYIIPISLLFGRIDDVI 266
           AR  ++F T+YI P S +FGR + VI
Sbjct: 146 ARIVLQFRTAYIAPSSRVFGRGELVI 171


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,283,251
Number of Sequences: 37544
Number of extensions: 185625
Number of successful extensions: 393
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 576724416
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)