BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30206
(369 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF217994-1|AAG17236.1| 353|Homo sapiens unknown protein. 33 0.38
X75962-1|CAA53576.1| 277|Homo sapiens OX40 homologue protein. 30 2.0
S76792-1|AAB33944.1| 274|Homo sapiens OX40 protein. 30 2.0
DQ118974-1|AAZ15374.1| 277|Homo sapiens tumor necrosis factor r... 30 2.0
BC105072-1|AAI05073.1| 277|Homo sapiens tumor necrosis factor r... 30 2.0
BC105070-1|AAI05071.1| 277|Homo sapiens tumor necrosis factor r... 30 2.0
AL162741-8|CAI23250.1| 277|Homo sapiens tumor necrosis factor r... 30 2.0
AL162741-7|CAI23249.1| 131|Homo sapiens tumor necrosis factor r... 30 2.0
AJ277151-1|CAB96543.1| 277|Homo sapiens CD134 antigen protein. 30 2.0
BC101847-1|AAI01848.1| 196|Homo sapiens peptidoglycan recogniti... 29 3.5
BC101845-1|AAI01846.1| 196|Homo sapiens peptidoglycan recogniti... 29 3.5
BC096157-1|AAH96157.1| 196|Homo sapiens peptidoglycan recogniti... 29 3.5
BC096156-1|AAH96156.1| 196|Homo sapiens peptidoglycan recogniti... 29 3.5
BC096155-1|AAH96155.1| 196|Homo sapiens peptidoglycan recogniti... 29 3.5
BC096154-1|AAH96154.1| 196|Homo sapiens peptidoglycan recogniti... 29 3.5
AY358936-1|AAQ89295.1| 196|Homo sapiens Granulocyte pep A protein. 29 3.5
AF242517-1|AAF99598.1| 196|Homo sapiens hypothetical protein SB... 29 3.5
AF076483-1|AAC31822.1| 196|Homo sapiens peptidoglycan recogniti... 29 3.5
AC007785-2|AAD38243.1| 196|Homo sapiens peptidoglycan recogniti... 29 3.5
BC146759-1|AAI46760.1| 1523|Homo sapiens slit homolog 3 (Drosoph... 29 6.2
AY358884-1|AAQ89243.1| 1523|Homo sapiens SLIT3 protein. 29 6.2
AF075240-1|AAD19336.1| 850|Homo sapiens SLIT1 protein protein. 29 6.2
AB017169-1|BAA35186.1| 1523|Homo sapiens Slit-3 protein protein. 29 6.2
AB011538-1|BAA32466.2| 1559|Homo sapiens MEGF5 protein. 29 6.2
>AF217994-1|AAG17236.1| 353|Homo sapiens unknown protein.
Length = 353
Score = 32.7 bits (71), Expect = 0.38
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +3
Query: 309 KKKKKNSRGGPVPNS 353
KKKKKNSRGGPVP +
Sbjct: 46 KKKKKNSRGGPVPGN 60
>X75962-1|CAA53576.1| 277|Homo sapiens OX40 homologue protein.
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +2
Query: 17 GINSAECPPDQYDPGPN--CAFETICALRSAHS 109
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>S76792-1|AAB33944.1| 274|Homo sapiens OX40 protein.
Length = 274
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +2
Query: 17 GINSAECPPDQYDPGPN--CAFETICALRSAHS 109
G++ A CPP + PG N C T C L H+
Sbjct: 119 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 151
>DQ118974-1|AAZ15374.1| 277|Homo sapiens tumor necrosis factor
receptor superfamily, member 4 protein.
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +2
Query: 17 GINSAECPPDQYDPGPN--CAFETICALRSAHS 109
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>BC105072-1|AAI05073.1| 277|Homo sapiens tumor necrosis factor
receptor superfamily, member 4 protein.
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +2
Query: 17 GINSAECPPDQYDPGPN--CAFETICALRSAHS 109
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>BC105070-1|AAI05071.1| 277|Homo sapiens tumor necrosis factor
receptor superfamily, member 4 protein.
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +2
Query: 17 GINSAECPPDQYDPGPN--CAFETICALRSAHS 109
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>AL162741-8|CAI23250.1| 277|Homo sapiens tumor necrosis factor
receptor superfamily, member 4 protein.
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +2
Query: 17 GINSAECPPDQYDPGPN--CAFETICALRSAHS 109
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>AL162741-7|CAI23249.1| 131|Homo sapiens tumor necrosis factor
receptor superfamily, member 4 protein.
Length = 131
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +2
Query: 17 GINSAECPPDQYDPGPN--CAFETICALRSAHS 109
G++ A CPP + PG N C T C L H+
Sbjct: 67 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 99
>AJ277151-1|CAB96543.1| 277|Homo sapiens CD134 antigen protein.
Length = 277
Score = 30.3 bits (65), Expect = 2.0
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = +2
Query: 17 GINSAECPPDQYDPGPN--CAFETICALRSAHS 109
G++ A CPP + PG N C T C L H+
Sbjct: 122 GVDCAPCPPGHFSPGDNQACKPWTNCTLAGKHT 154
>BC101847-1|AAI01848.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 7 SARGN*LCGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 171
+A+G CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 147 AAQGLLACGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>BC101845-1|AAI01846.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 7 SARGN*LCGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 171
+A+G CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 147 AAQGLLACGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>BC096157-1|AAH96157.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 7 SARGN*LCGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 171
+A+G CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 147 AAQGLLACGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>BC096156-1|AAH96156.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 7 SARGN*LCGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 171
+A+G CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 147 AAQGLLACGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>BC096155-1|AAH96155.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 7 SARGN*LCGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 171
+A+G CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 147 AAQGLLACGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>BC096154-1|AAH96154.1| 196|Homo sapiens peptidoglycan recognition
protein 1 protein.
Length = 196
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 7 SARGN*LCGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 171
+A+G CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 147 AAQGLLACGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>AY358936-1|AAQ89295.1| 196|Homo sapiens Granulocyte pep A protein.
Length = 196
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 7 SARGN*LCGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 171
+A+G CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 147 AAQGLLACGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>AF242517-1|AAF99598.1| 196|Homo sapiens hypothetical protein
SBBI68 protein.
Length = 196
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 7 SARGN*LCGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 171
+A+G CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 147 AAQGLLACGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>AF076483-1|AAC31822.1| 196|Homo sapiens peptidoglycan recognition
protein precursor protein.
Length = 196
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 7 SARGN*LCGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 171
+A+G CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 147 AAQGLLACGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>AC007785-2|AAD38243.1| 196|Homo sapiens peptidoglycan recognition
protein precursor protein.
Length = 196
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +1
Query: 7 SARGN*LCGMSTGPIRSGSKLRLRDNLCITKRTLKQETLL*LLVQAWPHKGLYRS 171
+A+G CG++ G +RS L+ ++ +RTL L L+Q WPH YRS
Sbjct: 147 AAQGLLACGVAQGALRSNYVLKGHRDV---QRTLSPGNQLYHLIQNWPH---YRS 195
>BC146759-1|AAI46760.1| 1523|Homo sapiens slit homolog 3 (Drosophila)
protein.
Length = 1523
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +2
Query: 2 RIRHEGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPG 148
RI +E + PP P C T+C S K C C+PG
Sbjct: 1310 RINNELQDFKALPPQSLGVSPGCKSCTVCKHGLCRSVEKDSVVCECRPG 1358
>AY358884-1|AAQ89243.1| 1523|Homo sapiens SLIT3 protein.
Length = 1523
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +2
Query: 2 RIRHEGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPG 148
RI +E + PP P C T+C S K C C+PG
Sbjct: 1310 RINNELQDFKALPPQSLGVSPGCKSCTVCKHGLCRSVEKDSVVCECRPG 1358
>AF075240-1|AAD19336.1| 850|Homo sapiens SLIT1 protein protein.
Length = 850
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +2
Query: 2 RIRHEGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPG 148
RI +E + PP P C T+C S K C C+PG
Sbjct: 637 RINNELQDFKALPPQSLGVSPGCKSCTVCKHGLCRSVEKDSVVCECRPG 685
>AB017169-1|BAA35186.1| 1523|Homo sapiens Slit-3 protein protein.
Length = 1523
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +2
Query: 2 RIRHEGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPG 148
RI +E + PP P C T+C S K C C+PG
Sbjct: 1310 RINNELQDFKALPPQSLGVSPGCKSCTVCKHGLCRSVEKDSVVCECRPG 1358
>AB011538-1|BAA32466.2| 1559|Homo sapiens MEGF5 protein.
Length = 1559
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +2
Query: 2 RIRHEGINSAECPPDQYDPGPNCAFETICALRSAHSNRKHYCDCWCKPG 148
RI +E + PP P C T+C S K C C+PG
Sbjct: 1346 RINNELQDFKALPPQSLGVSPGCKSCTVCKHGLCRSVEKDSVVCECRPG 1394
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,717,666
Number of Sequences: 237096
Number of extensions: 1055174
Number of successful extensions: 2178
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2161
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -