Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30202
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 6e-13
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 43 2e-04
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 41 7e-04
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 38 0.006
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 37 0.011
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 36 0.020
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 35 0.035
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 35 0.035
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.24
SB_55021| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-45) 32 0.32
SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_10280| Best HMM Match : F-box (HMM E-Value=5.2e-09) 31 0.56
SB_19418| Best HMM Match : Mucin (HMM E-Value=0.024) 30 1.3
SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_9611| Best HMM Match : p450 (HMM E-Value=1.1e-05) 30 1.3
SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18) 29 1.7
SB_30749| Best HMM Match : FARP (HMM E-Value=0.032) 29 1.7
SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_14427| Best HMM Match : Cadherin (HMM E-Value=0) 29 3.0
SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41) 29 3.0
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 28 5.3
SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_11989| Best HMM Match : Ca_channel_B (HMM E-Value=1.1e-16) 27 9.2
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 27 9.2
SB_4518| Best HMM Match : CBM_14 (HMM E-Value=0.019) 27 9.2
SB_1138| Best HMM Match : CUB (HMM E-Value=0) 27 9.2
SB_2045| Best HMM Match : EGF (HMM E-Value=0) 27 9.2
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 70.9 bits (166), Expect = 6e-13
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Frame = +2
Query: 134 NERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQP- 310
N +Y + +C+ ++ C NG CP LRY+P C++ + V C +R ++ P
Sbjct: 523 NGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDPAKG----RCEWADTVDCGQRPTISPH 578
Query: 311 -PQPTELCPHQ------FGYFK----LGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETY 457
P+PT + P F K D NC+GF C NG Y CP L F+++
Sbjct: 579 PPKPTTMPPQPTPPKSPFCEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKL 638
Query: 458 RCEWPDEV 481
CEWP++V
Sbjct: 639 ECEWPNKV 646
Score = 68.9 bits (161), Expect = 2e-12
Identities = 45/134 (33%), Positives = 55/134 (41%), Gaps = 9/134 (6%)
Frame = +2
Query: 116 GQCRELNER-YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC-L 289
G C E ++ Y +C+ +I C N CP+ LR+NP C P V C
Sbjct: 441 GFCAERSDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKH----CDNPENVQCGP 496
Query: 290 ERSSLQPPQPTELCPHQFGYF-------KLGDARNCSGFRNCVNGVGYDFVCPDGLAFNS 448
R PT P F K DA NC+GF C NG Y CP L ++
Sbjct: 497 TRPPTPKVPPTTKAPFTKSPFCVGKQNGKYADANNCNGFVMCSNGYIYYMDCPSNLRYDP 556
Query: 449 ETYRCEWPDEVADC 490
RCEW D V DC
Sbjct: 557 AKGRCEWADTV-DC 569
Score = 62.1 bits (144), Expect = 3e-10
Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Frame = +2
Query: 101 PVRPTGQCRELNE-RYPVSGSCDRYIECING-TAEEKLCPDGLRYNPNVNFDVYPCQYPN 274
P+ + C E + Y S +C+ YI C NG T + CP GL +N + C YP+
Sbjct: 309 PLVDSNFCTERQDGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGM----CDYPS 364
Query: 275 EVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSET 454
VP SS + C H+ D+ NC GF C NG Y CP F+
Sbjct: 365 NVPGCSGSS-----GSGFC-HEKSDGNYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPAK 418
Query: 455 YRCE 466
RCE
Sbjct: 419 KRCE 422
Score = 60.1 bits (139), Expect = 1e-09
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 9/129 (6%)
Frame = +2
Query: 122 CREL-NERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERS 298
C E N Y +C+ +I C NG A ++ CP L+++ C++PN+V C R
Sbjct: 597 CEEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKK----LECEWPNKVNCKSRP 652
Query: 299 SLQP----PQP----TELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSET 454
+ P P P +E C G + D NC G+ C G Y C GL FN T
Sbjct: 653 TTVPYVTKPTPPSGNSEFCKKN-GNGRYRDPHNCLGYIVCRGGNIYFRNCRRGLRFNGVT 711
Query: 455 YRCEWPDEV 481
RC+ P V
Sbjct: 712 KRCDLPRNV 720
Score = 44.0 bits (99), Expect = 7e-05
Identities = 38/119 (31%), Positives = 48/119 (40%), Gaps = 4/119 (3%)
Frame = +2
Query: 101 PVRPTGQ---CREL-NERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQY 268
P P+G C++ N RY +C YI C G + C GLR+N C
Sbjct: 661 PTPPSGNSEFCKKNGNGRYRDPHNCLGYIVCRGGNIYFRNCRRGLRFNGVTK----RCDL 716
Query: 269 PNEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFN 445
P V C T + G + DA NC+GF C N + Y F CP L FN
Sbjct: 717 PRNVKCAGAGG-----GTFCEGRKDGDYV--DAVNCNGFIKCSNQLTYYFDCPSNLRFN 768
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 362 DARNCSGFRNCVNGVGY-DFVCPDGLAFNSETYRCEWPDEVADCDAEAFLGF 514
D+ NC+ + C NG + CP GLAFN C++P V C + GF
Sbjct: 326 DSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNVPGCSGSSGSGF 377
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 44.4 bits (100), Expect = 6e-05
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +2
Query: 269 PNEVPCLERSSLQPPQPTELCPHQFGYFKL----GDARNCSGFRNCVNGVGYDFVCPDGL 436
PN + C + ++ P + T +F K D ++CS + C G + CPDGL
Sbjct: 203 PNSIRCFGQGNIPPGKATPAEDEKFCAGKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGL 262
Query: 437 AFNSETYRCEWPDEV 481
FN+ C+ P +V
Sbjct: 263 KFNALIKSCDEPSKV 277
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 161 CDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLER 295
C Y +C G + +K CPDGL++N + C P++V C+ +
Sbjct: 242 CSAYYQCKKGRSFKKFCPDGLKFNALIK----SCDEPSKVNCVTK 282
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 42.7 bits (96), Expect = 2e-04
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 362 DARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEV 481
+ NC GF C G+ + CP GL FN++ C+W EV
Sbjct: 468 EKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEV 507
Score = 33.9 bits (74), Expect = 0.080
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 143 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 286
Y +C ++ C G A +K CP GL +N D+ C + +EV C
Sbjct: 466 YAEKENCYGFVLCGGGIAHKKTCPPGLIFNT----DLMVCDWSHEVKC 509
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 40.7 bits (91), Expect = 7e-04
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = +2
Query: 143 YPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 286
YP C YI C NG A E CP GL +N + C +P PC
Sbjct: 94 YPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKY----CDWPFNAPC 137
Score = 40.7 bits (91), Expect = 7e-04
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 374 CSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWP 472
C + C NG+ Y+ CP GL +N E C+WP
Sbjct: 100 CKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWP 132
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 374 CSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 490
C GF +C N CP GL +N +T +C+WP V DC
Sbjct: 91 CRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNV-DC 128
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = +2
Query: 158 SCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPC 286
+C +I C N A K CP GL YN C +P V C
Sbjct: 90 ACRGFIHCHNYNASYKPCPGGLLYNEKTK----QCDWPRNVDC 128
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 37.5 bits (83), Expect = 0.006
Identities = 27/79 (34%), Positives = 35/79 (44%)
Frame = +2
Query: 47 YQPFGQTNRFQNQYQEQAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLR 226
Y P+ +TN + P RP CRE +Y R+ C TAE +CP G
Sbjct: 2988 YCPYNETNI------DGIPCRPKYFCRE-GAKYETYCPAGRF--CNYTTAEPYICPGG-H 3037
Query: 227 YNPNVNFDVYPCQYPNEVP 283
Y PN + PC+YP P
Sbjct: 3038 YCPNGSDTYTPCEYPYYCP 3056
Score = 31.1 bits (67), Expect = 0.56
Identities = 25/85 (29%), Positives = 37/85 (43%)
Frame = +2
Query: 179 CINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLERSSLQPPQPTELCPHQFGYFKL 358
C +G+ + PDG Y P V + PC+ + P ++ L P T + + G +
Sbjct: 2820 CKSGSPDPN--PDG--YWPPV--EAGPCKMGHYCPKGTQAPLPCPDNT-MKNYTGGAGTV 2872
Query: 359 GDARNCSGFRNCVNGVGYDFVCPDG 433
D C R CVNG + CP G
Sbjct: 2873 DDCTPCPAGRYCVNGTAFGVPCPPG 2897
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 314 QPT-ELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDG 433
QPT + CP GY+ DA+ C C GV +CP+G
Sbjct: 2742 QPTCDPCPA--GYYCDPDAKKCPSHNYCPAGVTVPILCPNG 2780
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 125 RELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVPCLER 295
+ N Y +C YI C N E+ CP GL +N + C +P PC E+
Sbjct: 64 KRANGDYAHPENCKMYITCSNKITYERQCPAGLNWNDAKKW----CDWPKNAPCEEK 116
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 371 NCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 493
NC + C N + Y+ CP GL +N C+WP A C+
Sbjct: 75 NCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKN-APCE 114
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 36.7 bits (81), Expect = 0.011
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2
Query: 143 YPVSGSCDRYIECINGTAEEKLCPDGLRYN 232
Y CD YI C NG A E CP GL +N
Sbjct: 344 YAHPSKCDMYITCSNGIAHEMPCPAGLNWN 373
Score = 32.7 bits (71), Expect = 0.18
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 374 CSGFRNCVNGVGYDFVCPDGLAFNSETYRCE 466
C + C NG+ ++ CP GL +N T C+
Sbjct: 350 CDMYITCSNGIAHEMPCPAGLNWNDVTKECD 380
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 35.9 bits (79), Expect = 0.020
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = +2
Query: 362 DARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDE 478
D +N S F C NGV + C GL FN + CE PD+
Sbjct: 17 DEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQPDQ 55
Score = 31.1 bits (67), Expect = 0.56
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +2
Query: 167 RYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQ---YPNEVPCLERSSLQPPQPTELCPH 337
+++ C NG EE+ C GL +NP P Q P +V + +P+ +
Sbjct: 23 KFVICYNGVREERECAKGLVFNPKEKICEQPDQRYTKPKKVGRKSKLVENAQEPSHMAER 82
Query: 338 QFGYFKL 358
+FK+
Sbjct: 83 MKEFFKI 89
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 35.1 bits (77), Expect = 0.035
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 362 DARNCSGFRNC-VNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 493
D RNCS F C + CP GL ++ C+WP V DCD
Sbjct: 125 DPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYV-DCD 168
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 35.1 bits (77), Expect = 0.035
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 362 DARNCSGFRNC-VNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 493
D RNCS F C + CP GL ++ C+WP V DCD
Sbjct: 32 DPRNCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYV-DCD 75
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 33.1 bits (72), Expect = 0.14
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 362 DARNCSGFRNCVNGVGYDFV--CPDGLAFNSETYRCEWPDEVADCD 493
D R+CS F C + F+ CP GL ++ + C+WP V DCD
Sbjct: 1148 DPRDCSRFYQC-DAFHKTFLHRCPAGLKWSVKKTACDWPRYV-DCD 1191
Score = 32.7 bits (71), Expect = 0.18
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 362 DARNCSGFRNCVNGVGYDFV--CPDGLAFNSETYRCEWPDEVADCD 493
D R+CS F C + F+ CP GL ++ + C+WP V DCD
Sbjct: 898 DPRDCSKFYQC-DAFHRAFLHRCPAGLKWSVKKTACDWPRYV-DCD 941
Score = 32.7 bits (71), Expect = 0.18
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 362 DARNCSGFRNCVNGVGYDFV--CPDGLAFNSETYRCEWPDEVADCD 493
D R+CS F C + F+ CP GL ++ + C+WP V DCD
Sbjct: 1248 DPRDCSRFYQC-DAFHRAFLHRCPAGLKWSVKKTACDWPRYV-DCD 1291
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = +2
Query: 362 DARNCSGFRNC-VNGVGYDFVCPDGLAFNSETYRCEWPDEVADCD 493
D R+CS F C + + CPDGL ++ + C+ P V DCD
Sbjct: 1353 DPRDCSRFYQCDASHKTFLHRCPDGLKWSVKKTACDLPLYV-DCD 1396
Score = 30.3 bits (65), Expect = 0.98
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +2
Query: 362 DARNCSGFRNCVNGVGYDFV--CPDGLAFNSETYRCEWPDEVADCD 493
D +CS F C + F+ CP GL ++ + C+WP V DCD
Sbjct: 1003 DPMDCSRFYQC-DAFHRAFLHRCPAGLKWSVKKTTCDWPRYV-DCD 1046
>SB_41623| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1604
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 119 QCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPNEVP 283
+CR+ + ++P + + YIEC N + CPD + + N + CQ P +P
Sbjct: 419 ECRKPSGKFPDPSNINGYIECKNNIPKRVDCPD---VHQHWNDTLKTCQDPPAIP 470
>SB_55021| Best HMM Match : EGF_CA (HMM E-Value=1.4013e-45)
Length = 348
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +2
Query: 392 CVNGVG-YDFVCPDGLAFNSETYRCEWPDEVADCD 493
C+N G Y CP G+++N T CE DE A D
Sbjct: 127 CINTPGSYKCECPSGMSYNHGTGTCEDKDECASPD 161
>SB_32719| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 31.1 bits (67), Expect = 0.56
Identities = 41/146 (28%), Positives = 57/146 (39%), Gaps = 13/146 (8%)
Frame = +2
Query: 95 QAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNVNFDVYPCQYPN 274
Q PVR G + R CD EC+NGT E + G + D PC PN
Sbjct: 368 QCPVRYMG----IRCRVDKCDRCDLNAECLNGTCECRSGFVGNGFKCTATED--PC-IPN 420
Query: 275 EVPCLERSSLQPPQPTEL----CPHQFGYFKLGDARNCSGFRNCVN-GVGYDF-----VC 424
PC +P ++ CP F + ++ R C+N G+ D
Sbjct: 421 --PCENGGICRPGHGGKVFDCSCPSGFDGMRCEVTKSACKARPCLNGGICVDLTNDNGTL 478
Query: 425 PDGLAF-NSETYRCEWPDEVA--DCD 493
DG+ F N+ +RC P A +CD
Sbjct: 479 LDGVIFLNTSDFRCVCPKGYAGINCD 504
>SB_47132| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 31.1 bits (67), Expect = 0.56
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +2
Query: 362 DARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWPDEVADC 490
D C G+ +CV+G Y CP G + + C P +DC
Sbjct: 182 DTSRCDGYVSCVSGYIYYMPCPAGTQWKNAEDACVDP-SASDC 223
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 143 YPVSGSCDRYIECINGTAEEKLCPDGLRY 229
YP + CD Y+ C++G CP G ++
Sbjct: 180 YPDTSRCDGYVSCVSGYIYYMPCPAGTQW 208
>SB_10280| Best HMM Match : F-box (HMM E-Value=5.2e-09)
Length = 438
Score = 31.1 bits (67), Expect = 0.56
Identities = 16/71 (22%), Positives = 35/71 (49%)
Frame = +3
Query: 18 FAPLFTHKHSISLLDRQIASKISTRNKHQSGLLDNAGN*TKGIQCPEAATDILNASMEPL 197
FAP T +H+++ + + I+TR +++G + +GN + I P ++ ++ P
Sbjct: 122 FAPGVTGRHAVNFQKKSPSGNINTRKPYKTGNIHLSGNDSDSI--PSTSSQSFTETLSPR 179
Query: 198 KRNYAPMVSVT 230
+ P +T
Sbjct: 180 RDQKQPREYIT 190
>SB_19418| Best HMM Match : Mucin (HMM E-Value=0.024)
Length = 1213
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -3
Query: 133 QFPALSSRPDWCLFLVLILEAICLSKRLILCLCVNKGAKARQ 8
QF SS PD L ++L+ A+ + ++ C C+ GA+ R+
Sbjct: 955 QFITKSSMPDSTLIIILVSVAVGVILLVLACCCLCCGARRRR 996
>SB_41624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 329 CPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSETYRCEWP 472
C G F D N +G+ +CV+GVG C DGL + ++ C+ P
Sbjct: 172 CKSPDGMF--ADPYNEAGYIHCVSGVGKRVNCGDGLVWEKKS--CQKP 215
>SB_9611| Best HMM Match : p450 (HMM E-Value=1.1e-05)
Length = 278
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = +2
Query: 110 PTGQCRELNERYPVSG-SCDRYIECINGTAEEKLCPDGLRYNPNVNFD-VYPCQYPNEVP 283
P +L P+ +CD Y+E I AE + D ++ NP + D + C + E
Sbjct: 41 PNFSAHKLKSMVPLMNKACDVYMEKITRAAETRATIDVMKINPALTLDIIISCAFGVESD 100
Query: 284 C 286
C
Sbjct: 101 C 101
>SB_45927| Best HMM Match : WD40 (HMM E-Value=9e-18)
Length = 1764
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 257 PCQYPNEVPCLERSSLQPPQPTELCPHQFGYFKL 358
P + N + L RSS PPQP L HQ+ KL
Sbjct: 855 PYEVENSLGHLVRSSRVPPQPLMLSRHQYNLRKL 888
>SB_30749| Best HMM Match : FARP (HMM E-Value=0.032)
Length = 2565
Score = 29.5 bits (63), Expect = 1.7
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = -2
Query: 512 IRGKLQHRSRRLHQAIRSGRSQN*KPVRRDIQNRSLHRSRSF*IRCNCGRR 360
IR KL+HR + + R RS+ K +RR ++ R RSR GRR
Sbjct: 1837 IRRKLRHRRQVNRRRRRRQRSRRRKAIRRILRRRFGRRSRRINRHGRLGRR 1887
>SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1147
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = +2
Query: 392 CVNGVG-YDFVCPDGLAFNSETYRCEWPDEVAD 487
C N +G Y VCPDG+ + CE +E +D
Sbjct: 188 CYNTMGSYKCVCPDGMELMKDGVSCEDKNECSD 220
>SB_14427| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 2325
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = +2
Query: 101 PVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKLCPD 217
P RP G+C +L Y + CD C+ GT K C D
Sbjct: 2209 PCRPGGECTDLVNNYTCAYFCDD-DPCVPGTT--KFCSD 2244
>SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41)
Length = 653
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 389 NCVNGVG-YDFVCPDGLAFNSETYRCEWPDEVAD 487
NC N +G Y CP G + N+E +C DE A+
Sbjct: 468 NCKNTLGSYKCQCPLGYSMNNEMKKCVDRDECAE 501
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 27.9 bits (59), Expect = 5.3
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 261 ASTLTKCR--VSNDPRYSHRNRQNCVPINSDTSN*ATPAIAADSETA*TV*ATILYVPTD 434
A+TL R + RY HRN NC I+ ++S+ P+ A + + AT+L P +
Sbjct: 66 AATLWSRRPLICRSRRYRHRNGHNC-SISRNSSSEICPSCRALETSLSSCLATLLVRPLE 124
Query: 435 WLSILRPT 458
+ PT
Sbjct: 125 TIPAPAPT 132
>SB_3108| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 631
Score = 27.9 bits (59), Expect = 5.3
Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 3/117 (2%)
Frame = +2
Query: 122 CRELNERYPVSGSCDRYIECINGTAEEK-LCPDGLRYNPNVNFDVYPCQYPNEVPCLERS 298
C +++E +CD+ +C N +C G + D+ C + C + +
Sbjct: 276 CTDIDECVTGDHTCDKNAKCNNTIGSYHCMCNPGFSGDGRECTDIDEC-VTGDHTCDKNA 334
Query: 299 SLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSE--TYRC 463
+ C G+ GD RNC+ CV G D C N+ +Y C
Sbjct: 335 KCNNIIGSYHCTCNPGFS--GDGRNCTDIDECVTG---DHTCDKNAKCNNTIGSYHC 386
Score = 27.9 bits (59), Expect = 5.3
Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 3/117 (2%)
Frame = +2
Query: 122 CRELNERYPVSGSCDRYIECINGTAEEK-LCPDGLRYNPNVNFDVYPCQYPNEVPCLERS 298
C +++E +CD+ +C N +C G + D+ C + C + +
Sbjct: 399 CTDIDECVTGDHTCDKNAKCNNTIGSYHCMCNPGFSGDGRECTDIDEC-VTGDHTCDKNA 457
Query: 299 SLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSE--TYRC 463
+ C G+ GD RNC+ CV G D C N+ +Y C
Sbjct: 458 KCNNIIGSYHCTCNPGFS--GDGRNCTDIDECVTG---DHTCDKNAKCNNTIGSYHC 509
Score = 27.1 bits (57), Expect = 9.2
Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 3/118 (2%)
Frame = +2
Query: 119 QCRELNERYPVSGSCDRYIECINGTAEEKL-CPDGLRYNPNVNFDVYPCQYPNEVPCLER 295
+C +++E +CD+ C N C G + D+ C + + C +
Sbjct: 193 ECTDIDECVTGDHTCDKNAICNNTIGSYHCRCNPGFSGDGRNCTDIDECATGDHI-CDKN 251
Query: 296 SSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSE--TYRC 463
+ + C G+ GD RNC+ CV G D C N+ +Y C
Sbjct: 252 AKCNNTIGSYHCMCNPGFS--GDGRNCTDIDECVTG---DHTCDKNAKCNNTIGSYHC 304
Score = 27.1 bits (57), Expect = 9.2
Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 3/118 (2%)
Frame = +2
Query: 119 QCRELNERYPVSGSCDRYIECINGTAEEKL-CPDGLRYNPNVNFDVYPCQYPNEVPCLER 295
+C +++E +CD+ +C N C G + D+ C + C +
Sbjct: 316 ECTDIDECVTGDHTCDKNAKCNNIIGSYHCTCNPGFSGDGRNCTDIDEC-VTGDHTCDKN 374
Query: 296 SSLQPPQPTELCPHQFGYFKLGDARNCSGFRNCVNGVGYDFVCPDGLAFNSE--TYRC 463
+ + C G+ GD RNC+ CV G D C N+ +Y C
Sbjct: 375 AKCNNTIGSYHCTCNPGFS--GDGRNCTDIDECVTG---DHTCDKNAKCNNTIGSYHC 427
>SB_22289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1102
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 11/58 (18%)
Frame = +2
Query: 329 CP--HQFGY--FKLGDARNCSGFRNCVNGVGYDFV-------CPDGLAFNSETYRCEW 469
CP +Q GY F + + C+ +C N G CP G+ +N+ C+W
Sbjct: 412 CPNGYQHGYSGFGIFECSECNNDSSCFNSQGPTLTYENCNTSCPFGMGYNNSLGFCDW 469
>SB_11989| Best HMM Match : Ca_channel_B (HMM E-Value=1.1e-16)
Length = 319
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 61 TDKSLPKSVPGTSTSQAYWTMQGTERK 141
T+K+LP+S GT+ S T GT+ K
Sbjct: 177 TNKTLPRSASGTTVSSQPGTATGTQGK 203
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +2
Query: 161 CDRYIECINGTAEEKLCPDGLRYNPN 238
C CI G +E +LCP G Y PN
Sbjct: 1212 CPSGTYCIGGNSEPELCPIG-TYQPN 1236
>SB_4518| Best HMM Match : CBM_14 (HMM E-Value=0.019)
Length = 86
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 140 RYPVSGSCDRYIECINGTAEEKLCPDGLRYNPNV 241
RYP S +I C G + CP G ++ N+
Sbjct: 49 RYPAQPSTRGFIVCSKGMTKHVDCPQGQTFDSNL 82
>SB_1138| Best HMM Match : CUB (HMM E-Value=0)
Length = 499
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 254 YPCQYPNEVPCLERSSLQPPQPTELCPHQFGYFKLGDARNCSG 382
YP QYPN + C S++ +L F F + D C G
Sbjct: 381 YPAQYPNSISCTWVISVKDGNRVKL---SFSDFWIDDQHGCYG 420
>SB_2045| Best HMM Match : EGF (HMM E-Value=0)
Length = 1101
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +2
Query: 80 NQYQEQAPVRPTGQCRELNERYPVSGSCDRYIECINGTAEEKL-CPDGLR---YNPNVNF 247
NQY + P+ TG+ E+N S +C C++G A C G + +N+
Sbjct: 687 NQYTCECPLGFTGRHCEINIDDCASAACANGATCVDGIANYTCNCSIGYKGRHCGERINY 746
Query: 248 DV-YPCQY 268
V PC+Y
Sbjct: 747 CVTNPCKY 754
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,306,313
Number of Sequences: 59808
Number of extensions: 385690
Number of successful extensions: 1187
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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