Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30200
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1332 - 36379736-36379909,36380395-36380459,36380534-363806... 98 4e-21
01_06_1409 - 37111954-37112061,37112295-37112330,37112434-371124... 97 7e-21
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 35 0.045
11_01_0807 - 7178278-7178548,7178629-7178756,7178847-7179815,718... 31 0.42
01_05_0532 - 22992520-22992879,22993323-22993403,22993565-229936... 31 0.42
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058... 29 2.2
03_01_0311 + 2453057-2454610 28 3.9
12_01_0473 + 3708770-3710026 28 5.1
09_06_0120 - 20973635-20974879 28 5.1
08_02_1354 - 26337628-26338540,26339638-26339981 28 5.1
05_06_0095 - 25482796-25483019,25483470-25484093,25484427-25484676 28 5.1
01_06_1143 - 34862005-34862370,34862494-34862628,34862742-348629... 28 5.1
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 27 6.8
06_01_1195 + 10280864-10280979,10281024-10281115,10281211-102821... 27 8.9
05_07_0093 - 27648656-27648736,27649034-27649147,27649229-276492... 27 8.9
05_04_0303 - 20010761-20011756 27 8.9
01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159 27 8.9
>01_06_1332 -
36379736-36379909,36380395-36380459,36380534-36380612,
36380794-36380868,36381106-36381609,36382046-36382246,
36383033-36383566
Length = 543
Score = 97.9 bits (233), Expect = 4e-21
Identities = 53/133 (39%), Positives = 81/133 (60%), Gaps = 7/133 (5%)
Frame = +1
Query: 124 QGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVAKVG---QGGAGDQ----SSQLL 282
Q +Q + QSP++ S GS + G+Q G GG+ Q ++QLL
Sbjct: 346 QHILQQLQQQQQSPRI---SASGSQKSMNLTGSQPGTPLSGGTMTGGSASQGAEVTNQLL 402
Query: 283 SRPRLQELVREVDPTVQLDEEVEEMLLQLADDFIDTTLNSACALAKHRHAPNVELRDVQL 462
+ ++Q+LV +VDP ++D EVE++LL++ADDFID+ AC LAKHR + +E +DV L
Sbjct: 403 GKRKIQDLVSQVDPLGKVDPEVEDLLLEIADDFIDSVTAFACTLAKHRKSSVLEAKDVLL 462
Query: 463 HLERQWNMWIPGF 501
HLE+ W++ +PGF
Sbjct: 463 HLEKNWHLSVPGF 475
>01_06_1409 -
37111954-37112061,37112295-37112330,37112434-37112498,
37112610-37112688,37112967-37113041,37113623-37114147
Length = 295
Score = 97.1 bits (231), Expect = 7e-21
Identities = 40/87 (45%), Positives = 63/87 (72%)
Frame = +1
Query: 256 AGDQSSQLLSRPRLQELVREVDPTVQLDEEVEEMLLQLADDFIDTTLNSACALAKHRHAP 435
AG ++LLS+ + ELV ++DP+ +LD EVE++L+ +A+DF+++ AC+LAKHR +
Sbjct: 156 AGGSGNRLLSKRSIHELVAQIDPSEKLDPEVEDVLIDIAEDFVESVATFACSLAKHRKSS 215
Query: 436 NVELRDVQLHLERQWNMWIPGFGNDEL 516
+E +DV LH ER WN+ +PGF DE+
Sbjct: 216 ILEAKDVLLHAERSWNITLPGFSGDEI 242
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 34.7 bits (76), Expect = 0.045
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 8/98 (8%)
Frame = +1
Query: 121 GQGAIQYVNNPMQSPQLQNTSIQ-GSPSQHSP---MGTQSQVAKVGQGGAGDQSSQLLSR 288
G G + +P SP Q S + G P+ P A GG GD+S + R
Sbjct: 445 GTGTSKETRSPALSPPPQAASFKSGLPTDAFPGRLADNADHAAAAAAGGGGDKSEETTPR 504
Query: 289 PRLQEL----VREVDPTVQLDEEVEEMLLQLADDFIDT 390
P+L+ L VR V + ++++ Q+ ++ I+T
Sbjct: 505 PKLKPLHWDKVRASSDRVMVWDQLKSSSFQVNEEMIET 542
>11_01_0807 -
7178278-7178548,7178629-7178756,7178847-7179815,
7180465-7180518,7180622-7180798,7180913-7181926,
7182038-7182101,7182247-7182563,7182797-7182847
Length = 1014
Score = 31.5 bits (68), Expect = 0.42
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +1
Query: 166 QLQNTSIQGSPSQHSPMGTQSQVAKVGQGGAGDQSSQLLSRP--RLQELVR-EVDPTVQL 336
+L G P H P + A GG GD Q P +L R DP +
Sbjct: 46 ELSEGEKDGKPDTHPPPAAAAAEAAADDGGGGDHQQQQQQPPPHQLSRFARINSDPRIVS 105
Query: 337 DEEVE 351
DEE E
Sbjct: 106 DEEEE 110
>01_05_0532 -
22992520-22992879,22993323-22993403,22993565-22993639,
22994140-22994301
Length = 225
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = +1
Query: 70 SNNSLAQAANMPTIGTVGQGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVAKVGQ 249
S N A ++ P+ G+ GQ + + P S Q +NT + S QS G
Sbjct: 126 SANPFANSSIQPSAGSYGQATVGFAPRPSISDQSKNTIFSNALSSPVRRSLQSYHLTQGS 185
Query: 250 GGAG 261
G G
Sbjct: 186 GNGG 189
>06_03_1137 +
27903012-27904196,27904330-27904542,27905775-27905867,
27905940-27906008,27906412-27906612,27906688-27906834,
27907524-27907652,27909001-27909131,27909240-27909333
Length = 753
Score = 29.1 bits (62), Expect = 2.2
Identities = 22/74 (29%), Positives = 33/74 (44%)
Frame = +1
Query: 259 GDQSSQLLSRPRLQELVREVDPTVQLDEEVEEMLLQLADDFIDTTLNSACALAKHRHAPN 438
GD ++ + +L+EL R VDP ++ EE+ Q D + L+ A AK P
Sbjct: 619 GDDETEAVYNSKLEELKRLVDPIENRCKD-EEVRGQATRDLLKFILDHKTA-AKSLPTPE 676
Query: 439 VELRDVQLHLERQW 480
E D + QW
Sbjct: 677 QEAVDSECTKAEQW 690
>03_01_0311 + 2453057-2454610
Length = 517
Score = 28.3 bits (60), Expect = 3.9
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = +1
Query: 190 GSPSQHSPMGTQSQVAKVGQGGAGDQSSQLLSRPRLQELVREVDPT 327
G+P SP QS VA V +GG Q L +L+ L D T
Sbjct: 40 GAPPVSSPAARQSLVAVVSEGGEDSQRFLLEQEEQLRRLPSARDVT 85
>12_01_0473 + 3708770-3710026
Length = 418
Score = 27.9 bits (59), Expect = 5.1
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 43 SFVVLKV*MSNNSLAQAANMPTIGTVGQGA-IQYVNNPMQ--SPQLQNTSIQGSPSQHSP 213
+F +L V S+ + A+ P G G V P+Q S ++ G+ +
Sbjct: 300 AFWMLPVSASSAAAARPTEQPMWSFAGGGGGAATVQAPLQFMSTRVNYPGSAGAGMSDTN 359
Query: 214 MGTQSQVAKVGQGGAGDQSSQLLSRPRLQELVREVDPTVQLDEEVEE 354
+G + + +GGAGDQ Q +P + + R D D+ +E
Sbjct: 360 LGMLAALNAYNRGGAGDQQPQ--QQPEMDQQGRNDDDDDDGDDSGDE 404
>09_06_0120 - 20973635-20974879
Length = 414
Score = 27.9 bits (59), Expect = 5.1
Identities = 21/89 (23%), Positives = 39/89 (43%)
Frame = +1
Query: 160 SPQLQNTSIQGSPSQHSPMGTQSQVAKVGQGGAGDQSSQLLSRPRLQELVREVDPTVQLD 339
SP L G+P+ P G S A VG A + L + P L L+ P +
Sbjct: 18 SPSLPPNPAAGNPTSSPPQGNPSAAAAVGAAAAA--APTLTTSPSLLPLL----PPLPRA 71
Query: 340 EEVEEMLLQLADDFIDTTLNSACALAKHR 426
+ + +++ LA + + + + A ++ +R
Sbjct: 72 QALLQLISALASNLFELSPSRAAWISAYR 100
>08_02_1354 - 26337628-26338540,26339638-26339981
Length = 418
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 289 PRLQELVREVDPTVQLDEEVEEMLLQLADDFIDTTLNSACALAKHRHAP 435
P LVR+V P +L E VE M + + CA+ K AP
Sbjct: 101 PHEHALVRQVQPDTRLIEIVELMKQGARRVLVGKNIKEGCAINKQPFAP 149
>05_06_0095 - 25482796-25483019,25483470-25484093,25484427-25484676
Length = 365
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 67 MSNNSLAQAANMPTIGTVGQGAIQYVNNPMQSPQLQNTSIQGSPSQHS 210
+ + A A I TVG G+ Y+NN P NT Q +P Q++
Sbjct: 149 LGDEDTAAAHLSQCIFTVGMGSNDYLNNYFM-PAFYNTGSQYTPEQYA 195
>01_06_1143 - 34862005-34862370,34862494-34862628,34862742-34862992,
34863192-34863243,34863408-34863694,34864030-34864182,
34865393-34865889,34866173-34866241,34867006-34867074,
34867486-34867560,34869341-34869412,34869499-34869570,
34869664-34869807,34870321-34870416,34870736-34870807,
34871081-34871152,34871683-34871830,34872609-34872708
Length = 909
Score = 27.9 bits (59), Expect = 5.1
Identities = 22/91 (24%), Positives = 42/91 (46%)
Frame = +1
Query: 121 GQGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVAKVGQGGAGDQSSQLLSRPRLQ 300
G+ ++ VN QS ++ + S SP +++A + D++ +RP +
Sbjct: 782 GKNIVREVNTAYQSGEIAGVIDERISSSSSPECV-ARLASLAVKCCKDETD---ARPSMA 837
Query: 301 ELVREVDPTVQLDEEVEEMLLQLADDFIDTT 393
++VRE+D E EE+L + D +T
Sbjct: 838 DVVRELDAIRSALPEGEELLPEYGDQSATST 868
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 27.5 bits (58), Expect = 6.8
Identities = 21/70 (30%), Positives = 29/70 (41%)
Frame = +1
Query: 97 NMPTIGTVGQGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVAKVGQGGAGDQSSQ 276
N P+ VG IQY ++ Q P + G P S M + + G G QSS+
Sbjct: 155 NYPSTPGVGNAMIQYPSSQTQLPPTASAMRDGFPQAPSSMHIAPSLEQPHFGHDG-QSSK 213
Query: 277 LLSRPRLQEL 306
+ P Q L
Sbjct: 214 IAVDPSDQPL 223
>06_01_1195 +
10280864-10280979,10281024-10281115,10281211-10282156,
10282378-10283075,10283140-10284068
Length = 926
Score = 27.1 bits (57), Expect = 8.9
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +1
Query: 268 SSQLLSRPRLQELVREVDPTVQLDEEVEEMLLQLADDFIDTTLNSACALAKHRHAPNVEL 447
+ ++ +PRL L V+ L ++E+ L + +L+ KHRH +++
Sbjct: 82 AEEMEKKPRL--LKAWVEQVRDLSFDIEDCLAEFMVHVGSKSLSQQLMKLKHRHRIAIQI 139
Query: 448 RDVQLHLE 471
RD++ +E
Sbjct: 140 RDLKSRVE 147
>05_07_0093 -
27648656-27648736,27649034-27649147,27649229-27649288,
27649464-27649687,27649799-27649886,27650326-27650532,
27650566-27650784,27650903-27651001,27651439-27651504,
27651654-27651737,27651829-27651888,27652041-27652325,
27652789-27652836,27652988-27653034,27653442-27653556,
27653958-27654032,27654227-27654298,27654944-27656124,
27656613-27656757
Length = 1089
Score = 27.1 bits (57), Expect = 8.9
Identities = 23/116 (19%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Frame = +1
Query: 55 LKV*MSNNSLAQAANMPTIGTVGQGAIQYVNNPMQSPQLQNTSIQGSPSQH-SPMGTQSQ 231
+ + +SN+S +Q ++PT V G ++ +N + +N + S H +G ++
Sbjct: 360 MSIIVSNDSNSQNESVPTSADVPVGLVEVGSNSNDLRKEENIQGSVTTSNHLESVGAVAE 419
Query: 232 VAKVGQG----GAGDQSSQLLSRPRLQELVREVDPTVQLDEEVEEMLLQLADDFID 387
+ K+ + A Q + S+ + E+ R ++ QL ++++ + A+ +D
Sbjct: 420 LEKLRREMKMMEAALQGAARQSQSKADEIARLMNENEQLKSTIDDLKSKSAEAEMD 475
>05_04_0303 - 20010761-20011756
Length = 331
Score = 27.1 bits (57), Expect = 8.9
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Frame = +1
Query: 244 GQGGAGDQSSQLLSRPRL----QELVREVDPTVQL--DEEVEEMLLQLADDFIDTTLNSA 405
G GG GD+ ++ L RPRL Q R VD L V + ++QL T N A
Sbjct: 96 GGGGGGDEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVA 155
Query: 406 CALAKHR 426
L K+R
Sbjct: 156 SHLQKYR 162
>01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159
Length = 400
Score = 27.1 bits (57), Expect = 8.9
Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +1
Query: 157 QSPQLQNTSIQGSPSQHS--PMGTQSQVAKVGQGGAGDQSSQLLSRPRL 297
+SPQL +Q SPS H P S G AG + RP+L
Sbjct: 97 KSPQLSPVRLQVSPSPHRLLPPAPGSPAVNGEDGAAGTAQGRRPGRPQL 145
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,063,590
Number of Sequences: 37544
Number of extensions: 214033
Number of successful extensions: 705
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 705
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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