Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30198
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical pr... 288 2e-78
Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical pr... 270 5e-73
U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein ... 268 2e-72
Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical pr... 209 8e-55
Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical pr... 83 9e-17
Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p... 30 0.85
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p... 30 0.85
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr... 30 0.85
M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein. 30 0.85
Z99281-35|CAB16518.2| 524|Caenorhabditis elegans Hypothetical p... 28 4.6
Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z78062-5|CAB01500.1| 516|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical pr... 27 6.0
U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin iso... 27 6.0
AL021571-7|CAA16515.1| 516|Caenorhabditis elegans Hypothetical ... 27 6.0
AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin M... 27 6.0
U42844-4|ABM01868.1| 739|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z66564-2|CAA91474.1| 248|Caenorhabditis elegans Hypothetical
protein F52D10.3a protein.
Length = 248
Score = 288 bits (706), Expect = 2e-78
Identities = 140/172 (81%), Positives = 153/172 (88%), Gaps = 2/172 (1%)
Frame = +2
Query: 2 KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVAT 181
KQQMAKEYR KVEKELR+IC DVL LLDK LIPKA ESKVFYLKMKGDYYRYLAEVA+
Sbjct: 77 KQQMAKEYREKVEKELRDICQDVLNLLDKFLIPKAGAAESKVFYLKMKGDYYRYLAEVAS 136
Query: 182 GETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQ 361
G+ R+SVVE SQ++YQ+AF+I+K KMQPTHPIRLGLALNFSVF+YEILN+PDKACQLAKQ
Sbjct: 137 GDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFYEILNAPDKACQLAKQ 196
Query: 362 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDE--PAEGGD 511
AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD D + EGG+
Sbjct: 197 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDAATDDTDANETEGGN 248
>Z73910-2|CAA98138.1| 248|Caenorhabditis elegans Hypothetical
protein M117.2 protein.
Length = 248
Score = 270 bits (661), Expect = 5e-73
Identities = 135/168 (80%), Positives = 147/168 (87%)
Frame = +2
Query: 2 KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVAT 181
KQQ+AKEYRVKVE+EL +IC DVL LLD+ LI KA ESKVFYLKMKGDYYRYLAEVA+
Sbjct: 77 KQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAESKVFYLKMKGDYYRYLAEVAS 136
Query: 182 GETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQ 361
E R +VVE SQKAYQ+A +I+K KMQPTHPIRLGLALNFSVFYYEILN+P+ ACQLAKQ
Sbjct: 137 -EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFYYEILNTPEHACQLAKQ 195
Query: 362 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPAEG 505
AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD G D+ EG
Sbjct: 196 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDV-GAEDQEQEG 242
>U05038-1|AAA61872.1| 248|Caenorhabditis elegans 14-3-3 protein
protein.
Length = 248
Score = 268 bits (657), Expect = 2e-72
Identities = 134/168 (79%), Positives = 146/168 (86%)
Frame = +2
Query: 2 KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVAT 181
KQQ+AKEYRVKVE+EL +IC DVL LLD+ LI KA ESK FYLKMKGDYYRYLAEVA+
Sbjct: 77 KQQLAKEYRVKVEQELNDICQDVLKLLDEFLIVKAGAAESKAFYLKMKGDYYRYLAEVAS 136
Query: 182 GETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQ 361
E R +VVE SQKAYQ+A +I+K KMQPTHPIRLGLALNFSVFYYEILN+P+ ACQLAKQ
Sbjct: 137 -EDRAAVVEKSQKAYQEALDIAKDKMQPTHPIRLGLALNFSVFYYEILNTPEHACQLAKQ 195
Query: 362 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDTQGDGDEPAEG 505
AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD G D+ EG
Sbjct: 196 AFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDV-GAEDQEQEG 242
>Z66564-5|CAC42300.2| 198|Caenorhabditis elegans Hypothetical
protein F52D10.3b protein.
Length = 198
Score = 209 bits (511), Expect = 8e-55
Identities = 99/120 (82%), Positives = 110/120 (91%)
Frame = +2
Query: 2 KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVAT 181
KQQMAKEYR KVEKELR+IC DVL LLDK LIPKA ESKVFYLKMKGDYYRYLAEVA+
Sbjct: 77 KQQMAKEYREKVEKELRDICQDVLNLLDKFLIPKAGAAESKVFYLKMKGDYYRYLAEVAS 136
Query: 182 GETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQ 361
G+ R+SVVE SQ++YQ+AF+I+K KMQPTHPIRLGLALNFSVF+YEILN+PDKACQLAKQ
Sbjct: 137 GDDRNSVVEKSQQSYQEAFDIAKDKMQPTHPIRLGLALNFSVFFYEILNAPDKACQLAKQ 196
>Z73910-3|CAA98135.1| 125|Caenorhabditis elegans Hypothetical
protein M117.3 protein.
Length = 125
Score = 83.4 bits (197), Expect = 9e-17
Identities = 52/127 (40%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Frame = +2
Query: 140 MKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYE 319
M D++RYL + R S+ AYQ+A I+K KMQPTHPIRLGLALN S ++
Sbjct: 1 MVADHFRYLVQY-DDINREEHAHKSRIAYQEALGIAKDKMQPTHPIRLGLALNASALNFD 59
Query: 320 ILNSPDKACQLAKQAFDDAIAELDTLNE--DSYKDSTLIMQLLRDNLTLWTSDTQGDGDE 493
+LN P +A ++A+ A D A EL+ + DSY S L +L T + + DG E
Sbjct: 60 VLNLPKEANEIAQSALDSAHRELEKMKSSLDSYDISNLKRARTLYDLLKSTHEQRVDGKE 119
Query: 494 PAEGGDN 514
E DN
Sbjct: 120 -GEEADN 125
>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 65 DVLGLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 181
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1214 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1253
>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 65 DVLGLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 181
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1553 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1592
>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 65 DVLGLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 181
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 873 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 912
>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 65 DVLGLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 181
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1211 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1250
>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
protein ZK524.2e protein.
Length = 1816
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 65 DVLGLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 181
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1214 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1253
>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
protein ZK524.2d protein.
Length = 2155
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 65 DVLGLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 181
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1553 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1592
>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 65 DVLGLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 181
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1211 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1250
>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical protein
ZK524.2e protein.
Length = 1816
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 65 DVLGLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 181
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1214 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1253
>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
ZK524.2d protein.
Length = 2155
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 65 DVLGLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 181
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1553 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1592
>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical
protein ZK524.2c protein.
Length = 1475
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 65 DVLGLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 181
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 873 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 912
>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical protein
ZK524.2a protein.
Length = 1813
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 65 DVLGLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 181
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1211 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1250
>M62830-1|AAA93094.1| 1815|Caenorhabditis elegans UNC-13 protein.
Length = 1815
Score = 30.3 bits (65), Expect = 0.85
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 65 DVLGLLDKHLIPK-ASNPESKVFYLKMKGDYYRYLAEVAT 181
D+ L++H K PE Y K+KG Y++Y+A+++T
Sbjct: 1214 DLKMALEEHAQKKRCKTPEYMNLYFKVKGFYFKYVADLST 1253
>Z99281-35|CAB16518.2| 524|Caenorhabditis elegans Hypothetical
protein Y57G11C.17 protein.
Length = 524
Score = 27.9 bits (59), Expect = 4.6
Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = -3
Query: 184 SCGHFCKV-PVVISFHFEVKHFTFWIT 107
S G C V VV+++H +HF FW+T
Sbjct: 378 SLGALCAVFGVVLAWHGTRRHFIFWVT 404
>Z81466-5|CAE45043.1| 1309|Caenorhabditis elegans Hypothetical protein
C09H6.1b protein.
Length = 1309
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 184 SCGHFCKVPVVISFHFEVKHFT 119
SC +FC V ++FH V H T
Sbjct: 1263 SCEYFCHVSSELAFHMSVHHLT 1284
>Z81466-4|CAB03868.2| 1311|Caenorhabditis elegans Hypothetical protein
C09H6.1a protein.
Length = 1311
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 184 SCGHFCKVPVVISFHFEVKHFT 119
SC +FC V ++FH V H T
Sbjct: 1265 SCEYFCHVSSELAFHMSVHHLT 1286
>Z78062-5|CAB01500.1| 516|Caenorhabditis elegans Hypothetical
protein F16D3.7 protein.
Length = 516
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 270 CVGCIFALLISKASWYAFCESSTTECLVS 184
C GC+ + I ASW +C S + S
Sbjct: 367 CSGCVPPIAIDVASWLGYCNSMLNPIIYS 395
>Z46935-9|CAA87053.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 27.5 bits (58), Expect = 6.0
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = +2
Query: 41 KELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATG--ETRHSVVEDS 214
+ + C VL LDK +PK S+ E+ ++ +Y +VA G T + V +
Sbjct: 203 RRMNNACKSVLDQLDKEYVPKKSSTETDETADEINAAHYSQ-GKVAAGFTSTVMAPVTSN 261
Query: 215 QKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEIL-NSPDKACQ 349
+ A D + ++++ +R L NF E+ KAC+
Sbjct: 262 KAAVLDNDTVRYSRVKKNAFVR--LVTNFGPLNLELFAPKVPKACE 305
>Z36949-3|CAA85417.1| 523|Caenorhabditis elegans Hypothetical
protein F59E10.2 protein.
Length = 523
Score = 27.5 bits (58), Expect = 6.0
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = +2
Query: 41 KELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATG--ETRHSVVEDS 214
+ + C VL LDK +PK S+ E+ ++ +Y +VA G T + V +
Sbjct: 203 RRMNNACKSVLDQLDKEYVPKKSSTETDETADEINAAHYSQ-GKVAAGFTSTVMAPVTSN 261
Query: 215 QKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEIL-NSPDKACQ 349
+ A D + ++++ +R L NF E+ KAC+
Sbjct: 262 KAAVLDNDTVRYSRVKKNAFVR--LVTNFGPLNLELFAPKVPKACE 305
>U36187-1|AAC06337.1| 523|Caenorhabditis elegans cyclophilin
isoform 4 protein.
Length = 523
Score = 27.5 bits (58), Expect = 6.0
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = +2
Query: 41 KELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATG--ETRHSVVEDS 214
+ + C VL LDK +PK S+ E+ ++ +Y +VA G T + V +
Sbjct: 203 RRMNNACKSVLDQLDKEYVPKKSSTETDETADEINAAHYSQ-GKVAAGFTSTVMAPVTSN 261
Query: 215 QKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEIL-NSPDKACQ 349
+ A D + ++++ +R L NF E+ KAC+
Sbjct: 262 KAAVLDNDTVRYSRVKKNAFVR--LVTNFGPLNLELFAPKVPKACE 305
>AL021571-7|CAA16515.1| 516|Caenorhabditis elegans Hypothetical
protein F16D3.7 protein.
Length = 516
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 270 CVGCIFALLISKASWYAFCESSTTECLVS 184
C GC+ + I ASW +C S + S
Sbjct: 367 CSGCVPPIAIDVASWLGYCNSMLNPIIYS 395
>AF421146-1|AAL27008.1| 523|Caenorhabditis elegans cyclophilin
MOG-6 protein.
Length = 523
Score = 27.5 bits (58), Expect = 6.0
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = +2
Query: 41 KELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATG--ETRHSVVEDS 214
+ + C VL LDK +PK S+ E+ ++ +Y +VA G T + V +
Sbjct: 203 RRMNNACKSVLDQLDKEYVPKKSSTETDETADEINAAHYSQ-GKVAAGFTSTVMAPVTSN 261
Query: 215 QKAYQDAFEISKAKMQPTHPIRLGLALNFSVFYYEIL-NSPDKACQ 349
+ A D + ++++ +R L NF E+ KAC+
Sbjct: 262 KAAVLDNDTVRYSRVKKNAFVR--LVTNFGPLNLELFAPKVPKACE 305
>U42844-4|ABM01868.1| 739|Caenorhabditis elegans Hypothetical
protein C08A9.3 protein.
Length = 739
Score = 27.1 bits (57), Expect = 8.0
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = -2
Query: 230 LGMLSVNPLQQNVWFLLWPLL 168
L ++SV P++ N+W L+P+L
Sbjct: 262 LAVISVTPVKDNLWLPLFPIL 282
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,012,014
Number of Sequences: 27780
Number of extensions: 222899
Number of successful extensions: 642
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 640
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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