Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30197
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC022458-1|AAH22458.2|  394|Homo sapiens protein arginine methyl...    32   1.4  
AF263539-1|AAF91390.1|  334|Homo sapiens arginine N-methyltransf...    32   1.4  
AB209027-1|BAD92264.1|  269|Homo sapiens Protein arginine N-meth...    32   1.4  
AK092594-1|BAC03923.1|  266|Homo sapiens protein ( Homo sapiens ...    30   4.2  

>BC022458-1|AAH22458.2|  394|Homo sapiens protein arginine
           methyltransferase 8 protein.
          Length = 394

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
 Frame = -1

Query: 240 QNQRNT*IFSL-TIFN---GKTHKPSNFCTVPDGPYL-WKVHLVTLGNTLAI-GSTRSSG 79
           Q QRN  + +L T FN    K HK   F T PD PY  WK  +  L + L +       G
Sbjct: 297 QIQRNDYVHALVTYFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYG 356

Query: 78  SISVK 64
           +IS+K
Sbjct: 357 TISMK 361


>AF263539-1|AAF91390.1|  334|Homo sapiens arginine
           N-methyltransferase protein.
          Length = 334

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
 Frame = -1

Query: 240 QNQRNT*IFSL-TIFN---GKTHKPSNFCTVPDGPYL-WKVHLVTLGNTLAI-GSTRSSG 79
           Q QRN  + +L T FN    K HK   F T PD PY  WK  +  L + L +       G
Sbjct: 237 QIQRNDYVHALVTYFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYG 296

Query: 78  SISVK 64
           +IS+K
Sbjct: 297 TISMK 301


>AB209027-1|BAD92264.1|  269|Homo sapiens Protein arginine
           N-methyltransferase 4 variant protein.
          Length = 269

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
 Frame = -1

Query: 240 QNQRNT*IFSL-TIFN---GKTHKPSNFCTVPDGPYL-WKVHLVTLGNTLAI-GSTRSSG 79
           Q QRN  + +L T FN    K HK   F T PD PY  WK  +  L + L +       G
Sbjct: 172 QIQRNDYVHALVTYFNIEFTKCHKKMGFSTAPDAPYTHWKQTVFYLEDYLTVRRGEEIYG 231

Query: 78  SISVK 64
           +IS+K
Sbjct: 232 TISMK 236


>AK092594-1|BAC03923.1|  266|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35275 fis, clone PROST2006282, weakly similar to
           TRANSLATION INITIATION FACTOR IF-2. ).
          Length = 266

 Score = 30.3 bits (65), Expect = 4.2
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = -2

Query: 425 SSRVGTKRTSRRSVACGLRLR-FALVAQGDCVRAASRDGR---GVQRQRP 288
           SSR G    S  + AC  RLR F   A  + + A + DGR   G+Q +RP
Sbjct: 99  SSRCGVPARSSAASACSCRLRIFLRTASSELLPAIAPDGRRAGGLQWERP 148


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,888,583
Number of Sequences: 237096
Number of extensions: 1679836
Number of successful extensions: 4090
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4090
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)