Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30197
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membr... 52 2e-07
U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein... 52 2e-07
Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical po... 51 4e-07
Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical pr... 51 6e-07
U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane p... 51 6e-07
Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin prot... 50 1e-06
Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein. 49 2e-06
U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein... 49 2e-06
AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin prote... 49 2e-06
Z68302-1|CAA92634.2| 382|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane p... 48 3e-06
U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein... 48 3e-06
U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein... 48 3e-06
U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein... 48 4e-06
U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein... 48 4e-06
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 47 9e-06
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 47 9e-06
AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin prote... 46 1e-05
AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin prote... 46 1e-05
AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin prote... 46 2e-05
AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin prote... 46 2e-05
AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin prote... 46 2e-05
Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin prot... 45 4e-05
AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin prot... 45 4e-05
U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein... 44 6e-05
AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction ... 43 1e-04
AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin prote... 43 1e-04
U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein... 42 3e-04
Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical pr... 36 0.017
AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein. 36 0.017
AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin ... 28 3.4
Z35639-1|CAA84693.1| 1792|Caenorhabditis elegans Hypothetical pr... 27 6.0
U97017-6|AAB52362.1| 374|Caenorhabditis elegans Hypothetical pr... 27 6.0
AL021171-4|CAA15959.1| 409|Caenorhabditis elegans Hypothetical ... 27 6.0
X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogen... 27 8.0
U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin st... 27 8.0
U39854-3|AAA81078.2| 263|Caenorhabditis elegans Hypothetical pr... 27 8.0
AC024791-36|AAF60654.3| 481|Caenorhabditis elegans Innexin prot... 27 8.0
AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 27 8.0
>U59211-1|AAB09670.1| 420|Caenorhabditis elegans embryonic membrane
protein protein.
Length = 420
Score = 52.4 bits (120), Expect = 2e-07
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +2
Query: 110 VFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
VFP+VT C F V ++ CVL +N+ NEKIY+F+WFWF+
Sbjct: 243 VFPRVTLCDF-SVRKLANVHRYTVQCVLMINMFNEKIYLFIWFWFV 287
>U53343-3|AAA96220.2| 420|Caenorhabditis elegans Innexin protein 3
protein.
Length = 420
Score = 52.4 bits (120), Expect = 2e-07
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +2
Query: 110 VFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
VFP+VT C F V ++ CVL +N+ NEKIY+F+WFWF+
Sbjct: 243 VFPRVTLCDF-SVRKLANVHRYTVQCVLMINMFNEKIYLFIWFWFV 287
>Z70685-1|CAA94607.1| 522|Caenorhabditis elegans Hypothetical
protein R07D5.1 protein.
Length = 522
Score = 51.2 bits (117), Expect = 4e-07
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +2
Query: 110 VFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
+FP+VT C F + G + + CVL +N+ NEKI++FLWFWF+
Sbjct: 370 MFPRVTLCDF-EVRVLGNIHRHTVQCVLMINMFNEKIFLFLWFWFL 414
>Z19122-1|CAA79529.1| 522|Caenorhabditis elegans hypothetical
polypeptide protein.
Length = 522
Score = 51.2 bits (117), Expect = 4e-07
Identities = 21/46 (45%), Positives = 31/46 (67%)
Frame = +2
Query: 110 VFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
+FP+VT C F + G + + CVL +N+ NEKI++FLWFWF+
Sbjct: 370 MFPRVTLCDF-EVRVLGNIHRHTVQCVLMINMFNEKIFLFLWFWFL 414
>Z69658-2|CAB60997.1| 389|Caenorhabditis elegans Hypothetical
protein C36H8.2 protein.
Length = 389
Score = 50.8 bits (116), Expect = 6e-07
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
FP++ C F++ P+ +VQ LCVL LNI EK+++FLWFW +
Sbjct: 242 FPRIVHCDFNRRRPA-SVQLDTVLCVLTLNIYYEKLFIFLWFWLV 285
>U59213-1|AAB09672.1| 363|Caenorhabditis elegans transmembrane
protein protein.
Length = 363
Score = 50.8 bits (116), Expect = 6e-07
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
FP++ C F++ P+ +VQ LCVL LNI EK+++FLWFW +
Sbjct: 216 FPRIVHCDFNRRRPA-SVQLDTVLCVLTLNIYYEKLFIFLWFWLV 259
>Z75552-3|CAA99940.1| 465|Caenorhabditis elegans Hypothetical
protein W04D2.3 protein.
Length = 465
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 44 YGSDVVS-FTEMEPEERVDPMARVFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKI 220
YG VV + EP ER + FP+ C F + +Q++ CVL +NI NEKI
Sbjct: 232 YGFGVVQDIVQGEPWER----SGYFPRAAVCDF-EVRQVANIQRYSVQCVLVINIFNEKI 286
Query: 221 YVFLWFWFM 247
+V LWFW++
Sbjct: 287 FVLLWFWYV 295
>AC024791-35|AAF60675.2| 462|Caenorhabditis elegans Innexin protein
22 protein.
Length = 462
Score = 49.6 bits (113), Expect = 1e-06
Identities = 18/46 (39%), Positives = 30/46 (65%)
Frame = +2
Query: 110 VFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
VFP++ C H+ G V +F C+LP N VN K+++FL++W++
Sbjct: 245 VFPQIVGCNPHRAQLGGVVNEFIMRCILPQNFVNSKVFLFLYWWYI 290
>Z50755-1|CAB61030.2| 386|Caenorhabditis elegans Hypothetical
protein R12H7.1 protein.
Length = 386
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWF 244
FP+VT C F + G V + CVL +N+ NEKI++FLWFW+
Sbjct: 248 FPRVTLCDF-EVKVLGNVHRHTVQCVLMINMFNEKIFLFLWFWY 290
>U93195-1|AAB51534.1| 386|Caenorhabditis elegans UNC-9 protein.
Length = 386
Score = 49.2 bits (112), Expect = 2e-06
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWF 244
FP+VT C F + G V + CVL +N+ NEKI++FLWFW+
Sbjct: 248 FPRVTLCDF-EVKVLGNVHRHTVQCVLMINMFNEKIFLFLWFWY 290
>U41558-3|AAK39244.1| 556|Caenorhabditis elegans Innexin protein 7
protein.
Length = 556
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/46 (50%), Positives = 28/46 (60%)
Frame = +2
Query: 110 VFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
VFP+VT C F G VQ CVL LN+ EKI+VFLW W++
Sbjct: 275 VFPRVTLCDFETRD-MGNVQMHTVQCVLLLNLFTEKIFVFLWAWYI 319
>AF040656-3|AAB95049.1| 385|Caenorhabditis elegans Innexin protein
13 protein.
Length = 385
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
FP+VT C F + G + CVL +N+ NEK+YVFLWFW +
Sbjct: 236 FPRVTMCDF-EVRVLGNKHRHTVQCVLMINMFNEKVYVFLWFWLV 279
>Z68302-1|CAA92634.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.3 protein.
Length = 382
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/66 (31%), Positives = 33/66 (50%)
Frame = +2
Query: 110 VFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFMXXXXXXXXXXXYRM 289
+FP+VT C F +G + C++ +N+ NEKI++FLWFW + Y
Sbjct: 234 LFPRVTFCDFEIRETAGNNRAETVECLIGINVFNEKIFLFLWFWLLFLIFSTLVAHIYNA 293
Query: 290 AVVAGP 307
+A P
Sbjct: 294 THIAKP 299
>U59212-1|AAB09671.1| 428|Caenorhabditis elegans transmembrane
protein protein.
Length = 428
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWF 244
FP+VT C F + G V CVL +N+ NEKI++FLWFW+
Sbjct: 241 FPRVTMCDF-EVRVLGNVHHHTVQCVLMINMFNEKIFLFLWFWY 283
>U39677-5|AAN71843.1| 383|Caenorhabditis elegans Innexin protein 1,
isoform b protein.
Length = 383
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWF 244
FP+VT C F + G V CVL +N+ NEKI++FLWFW+
Sbjct: 241 FPRVTMCDF-EVRVLGNVHHHTVQCVLMINMFNEKIFLFLWFWY 283
>U39677-4|AAN71842.1| 428|Caenorhabditis elegans Innexin protein 1,
isoform a protein.
Length = 428
Score = 48.4 bits (110), Expect = 3e-06
Identities = 21/44 (47%), Positives = 28/44 (63%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWF 244
FP+VT C F + G V CVL +N+ NEKI++FLWFW+
Sbjct: 241 FPRVTMCDF-EVRVLGNVHHHTVQCVLMINMFNEKIFLFLWFWY 283
>U41746-5|AAT81186.1| 492|Caenorhabditis elegans Innexin protein
10, isoform b protein.
Length = 492
Score = 48.0 bits (109), Expect = 4e-06
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +2
Query: 110 VFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
+FP+V+ C F G +Q+ CVL +NI NEKI++ LWFW++
Sbjct: 248 MFPRVSLCDFD-VRVMGNMQEHTIQCVLVINIFNEKIFILLWFWYL 292
>U41746-4|AAA83332.1| 559|Caenorhabditis elegans Innexin protein
10, isoform a protein.
Length = 559
Score = 48.0 bits (109), Expect = 4e-06
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +2
Query: 110 VFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
+FP+V+ C F G +Q+ CVL +NI NEKI++ LWFW++
Sbjct: 248 MFPRVSLCDFD-VRVMGNMQEHTIQCVLVINIFNEKIFILLWFWYL 292
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 46.8 bits (106), Expect = 9e-06
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
FP++ C F + G +Q++ CVL LN+ NEKI++FL+ WF+
Sbjct: 243 FPRIAMCDF-QVRVLGNLQRYSIQCVLTLNMFNEKIFLFLYIWFL 286
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 46.8 bits (106), Expect = 9e-06
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
FP++ C F + G +Q++ CVL LN+ NEKI++FL+ WF+
Sbjct: 243 FPRIAMCDF-QVRVLGNLQRYSIQCVLTLNMFNEKIFLFLYIWFL 286
>AF068716-8|AAC17749.1| 554|Caenorhabditis elegans Innexin protein
4 protein.
Length = 554
Score = 46.4 bits (105), Expect = 1e-05
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWF 244
FP+VT C F + G Q+ CVL +NI NEKI++ +W WF
Sbjct: 286 FPRVTLCDF-EVRVLGNNQRHSVQCVLVINIFNEKIFILIWLWF 328
>AF067219-6|AAC17030.1| 382|Caenorhabditis elegans Innexin protein
15 protein.
Length = 382
Score = 46.4 bits (105), Expect = 1e-05
Identities = 17/46 (36%), Positives = 32/46 (69%)
Frame = +2
Query: 110 VFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
+FP+ T C F + G++QK+ CVL +N++NEK+++ L++W +
Sbjct: 234 IFPRQTMCDF-EIRKKGSIQKYSVQCVLSMNMLNEKVFLALFYWII 278
>AF067219-7|AAC17026.2| 372|Caenorhabditis elegans Innexin protein
16 protein.
Length = 372
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/44 (43%), Positives = 28/44 (63%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWF 244
FP+V+ C + G + + CVL +N+ NEKI++FLWFWF
Sbjct: 229 FPRVSFCDIN-VRELGNIHHWSLQCVLMVNMFNEKIFIFLWFWF 271
>AF063009-2|AAO21399.1| 438|Caenorhabditis elegans Innexin protein
19, isoform b protein.
Length = 438
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 113 FPKVTKCTFH-KYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
FP+VT C F +Y + ++ C L +NI+NEK++ FLW W+M
Sbjct: 251 FPRVTLCDFEVRY--LANLNRYTVQCALLINIINEKVFAFLWCWYM 294
>AF063009-1|AAM45360.1| 454|Caenorhabditis elegans Innexin protein
19, isoform a protein.
Length = 454
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = +2
Query: 113 FPKVTKCTFH-KYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
FP+VT C F +Y + ++ C L +NI+NEK++ FLW W+M
Sbjct: 267 FPRVTLCDFEVRY--LANLNRYTVQCALLINIINEKVFAFLWCWYM 310
>Z68302-5|CAA92633.2| 382|Caenorhabditis elegans Hypothetical
protein ZK792.2 protein.
Length = 382
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 110 VFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFMXXXXXXXXXXXYRM 289
+FP+VT C F +G + CV+ +N NEKI++F WFW + Y
Sbjct: 234 LFPRVTFCDFQVREMAGNNRDETVECVIGINEFNEKIFLFFWFWLVFLVFSTLIAHFYNA 293
Query: 290 AVVAGP 307
A + P
Sbjct: 294 AQIVKP 299
>AF067607-11|AAM81119.1| 412|Caenorhabditis elegans Innexin protein
18, isoform b protein.
Length = 412
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFW 241
FP+VT C F + G V + CVL +N++ EKI++FLW W
Sbjct: 254 FPRVTLCDF-EIRVLGNVHRHTVQCVLVINMLTEKIFIFLWLW 295
>AF067607-10|AAM81118.1| 436|Caenorhabditis elegans Innexin protein
18, isoform a protein.
Length = 436
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFW 241
FP+VT C F + G V + CVL +N++ EKI++FLW W
Sbjct: 254 FPRVTLCDF-EIRVLGNVHRHTVQCVLVINMLTEKIFIFLWLW 295
>U64859-3|AAC69093.2| 447|Caenorhabditis elegans Innexin protein 5
protein.
Length = 447
Score = 44.0 bits (99), Expect = 6e-05
Identities = 18/46 (39%), Positives = 28/46 (60%)
Frame = +2
Query: 110 VFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
+FP+VT C F + +V CV+ +N++ EK+YVF WFW +
Sbjct: 248 IFPRVTMCDFSIMDLT-SVHDHSIQCVIVINMLAEKVYVFFWFWLL 292
>AF303262-1|AAG50220.1| 362|Caenorhabditis elegans gap junction
innexin protein.
Length = 362
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWF 244
FP+VT C F + G V + CVL +N+ NEK+++ LW+W+
Sbjct: 232 FPRVTFCDF-QVRELGYVNNWSLQCVLMVNMFNEKLFIALWWWY 274
>AF067219-8|AAC17025.1| 362|Caenorhabditis elegans Innexin protein
17, isoform a protein.
Length = 362
Score = 42.7 bits (96), Expect = 1e-04
Identities = 18/44 (40%), Positives = 28/44 (63%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWF 244
FP+VT C F + G V + CVL +N+ NEK+++ LW+W+
Sbjct: 232 FPRVTFCDF-QVRELGYVNNWSLQCVLMVNMFNEKLFIALWWWY 274
>U97404-1|AAB93310.1| 408|Caenorhabditis elegans Innexin protein 12
protein.
Length = 408
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFW 241
FP+VT C + + K CVL +N+ NEKI+V LW+W
Sbjct: 250 FPRVTMCEYEVRNLDN-IHKHSVQCVLMINMFNEKIFVALWWW 291
>Z72506-2|CAA96621.1| 434|Caenorhabditis elegans Hypothetical
protein F07A5.1b protein.
Length = 434
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +2
Query: 32 EFSTYGSDVVSFTEMEPEERVDPMARVFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVN 211
EFS++ SD F + + + + FP + C + C++P+N++N
Sbjct: 241 EFSSF-SDKQRFAAILTDGSYNRF-QYFPILVGCEYQLQESVSNFVNHKAQCIIPMNVIN 298
Query: 212 EKIYVFLWFWFM 247
EKI++ L+FW +
Sbjct: 299 EKIFIGLYFWLL 310
>Z72506-1|CAA96618.1| 432|Caenorhabditis elegans Hypothetical
protein F07A5.1a protein.
Length = 432
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +2
Query: 32 EFSTYGSDVVSFTEMEPEERVDPMARVFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVN 211
EFS++ SD F + + + + FP + C + C++P+N++N
Sbjct: 241 EFSSF-SDKQRFAAILTDGSYNRF-QYFPILVGCEYQLQESVSNFVNHKAQCIIPMNVIN 298
Query: 212 EKIYVFLWFWFM 247
EKI++ L+FW +
Sbjct: 299 EKIFIGLYFWLL 310
>Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical
protein T23H4.1 protein.
Length = 483
Score = 39.1 bits (87), Expect = 0.002
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +2
Query: 113 FPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWF 244
FP VT C + G VQ+ CVL +NI EKI+ LW W+
Sbjct: 274 FPVVTYCDM-QIRILGHVQRHTVQCVLVINIFTEKIFFILWLWY 316
>Z66561-7|CAB54206.2| 419|Caenorhabditis elegans Hypothetical
protein F08G12.10 protein.
Length = 419
Score = 35.9 bits (79), Expect = 0.017
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 110 VFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
+FP++ C F K G + C++ LN++ EK+Y+ +FW +
Sbjct: 235 IFPRIVLCDF-KVRNLGQQHQHTVSCIMILNMIIEKLYICFYFWLI 279
>AF304127-1|AAG50240.1| 419|Caenorhabditis elegans innexin protein.
Length = 419
Score = 35.9 bits (79), Expect = 0.017
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 110 VFPKVTKCTFHKYGPSGTVQKFDGLCVLPLNIVNEKIYVFLWFWFM 247
+FP++ C F K G + C++ LN++ EK+Y+ +FW +
Sbjct: 235 IFPRIVLCDF-KVRNLGQQHQHTVSCIMILNMIIEKLYICFYFWLI 279
>AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 4 protein.
Length = 1603
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 280 IPHGRCRWTPRPSLLAARTQSPCATRANRSR 372
I H WT R LLAAR Q P + R R +
Sbjct: 1116 IEHENKEWTLRTELLAARPQMPSSLRQLREQ 1146
>Z35639-1|CAA84693.1| 1792|Caenorhabditis elegans Hypothetical protein
D2045.2 protein.
Length = 1792
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -3
Query: 454 QFFINQWINVLPELVQNEPVADL*LAGYGFDLLLWRKATACAQQVETDA 308
QFF N+ L + EPVA AG D +L + CAQQ +T A
Sbjct: 1698 QFFFNELAKSLEKWTPREPVA----AGKLIDNILEQADELCAQQKKTVA 1742
>U97017-6|AAB52362.1| 374|Caenorhabditis elegans Hypothetical
protein F47B3.7 protein.
Length = 374
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/54 (22%), Positives = 21/54 (38%)
Frame = +3
Query: 33 NFQLMAVTWSASQKWSPRNAWTRWPECFLK*LNAPSINTVHPVRCRNSMACVFC 194
N + + W+ + WT WP+ +N +IN + V + V C
Sbjct: 212 NVTNLELVWAGKTRSITHYQWTNWPDHGAPPINMGAINLIEAVNYDTNPVVVHC 265
>AL021171-4|CAA15959.1| 409|Caenorhabditis elegans Hypothetical
protein H04D03.3 protein.
Length = 409
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/49 (38%), Positives = 24/49 (48%)
Frame = -3
Query: 454 QFFINQWINVLPELVQNEPVADL*LAGYGFDLLLWRKATACAQQVETDA 308
QFF N+ L + EPVA AG D +L + CAQQ +T A
Sbjct: 315 QFFFNELAKSLEKWTPREPVA----AGKLIDNILEQADELCAQQKKTVA 359
>X03044-1|CAA26849.1| 1603|Caenorhabditis elegans put. vitellogenin
protein.
Length = 1603
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 286 HGRCRWTPRPSLLAARTQSPCATRANRSR 372
H WT R LLAAR Q P + R R +
Sbjct: 1118 HENKEWTLRTELLAARPQMPSSLRQLREQ 1146
>U42835-3|AAA83587.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 5 protein.
Length = 1603
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 286 HGRCRWTPRPSLLAARTQSPCATRANRSR 372
H WT R LLAAR Q P + R R +
Sbjct: 1118 HENKEWTLRTELLAARPQMPSSLRQLREQ 1146
>U39854-3|AAA81078.2| 263|Caenorhabditis elegans Hypothetical
protein W06B11.1 protein.
Length = 263
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +1
Query: 268 NFFVIPHGRCRWTPRPSLLAARTQSPCATRA-NRSRSPQATDR 393
NFF+ H +TPR + A+R S ++ A +R+ SP +R
Sbjct: 179 NFFIGRHPTVPFTPRQTKRASRASSAVSSHASSRNTSPIGRNR 221
>AC024791-36|AAF60654.3| 481|Caenorhabditis elegans Innexin protein
21 protein.
Length = 481
Score = 27.1 bits (57), Expect = 8.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 185 CVLPLNIVNEKIYVFLWFWFM 247
C+L N +N K ++ L++WF+
Sbjct: 275 CMLSANFLNAKAFLVLYWWFL 295
>AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 3 protein.
Length = 1603
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 286 HGRCRWTPRPSLLAARTQSPCATRANRSR 372
H WT R LLAAR Q P + R R +
Sbjct: 1118 HENKEWTLRTELLAARPQMPSSLRQLREQ 1146
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,310,180
Number of Sequences: 27780
Number of extensions: 253697
Number of successful extensions: 794
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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