Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30196
(516 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 205 2e-55
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 205 2e-55
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.5
AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein. 21 7.5
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 21 10.0
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 10.0
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 205 bits (500), Expect = 2e-55
Identities = 94/110 (85%), Positives = 103/110 (93%)
Frame = +3
Query: 186 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 365
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 366 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQ 515
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDK TQ
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQ 110
Score = 28.7 bits (61), Expect = 0.038
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +3
Query: 213 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 392
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 393 LSFWRGNFANVIRYFPTQALNFAFKD 470
+RG +V +A F F D
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYD 198
Score = 27.5 bits (58), Expect = 0.087
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +3
Query: 273 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 431
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 205 bits (500), Expect = 2e-55
Identities = 94/110 (85%), Positives = 103/110 (93%)
Frame = +3
Query: 186 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 365
MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1 MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60
Query: 366 VRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDKKTQ 515
VRIPKEQG LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVDK TQ
Sbjct: 61 VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQ 110
Score = 28.7 bits (61), Expect = 0.038
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +3
Query: 213 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 392
F + +GG + A S V P++ + L V K ++ + G+ + +I K G+
Sbjct: 115 FVGNLASGGAAGATSLCFVYPLDFARTRLAAD-VGKA-GGEREFTGLGNCLTKIFKADGI 172
Query: 393 LSFWRGNFANVIRYFPTQALNFAFKD 470
+RG +V +A F F D
Sbjct: 173 TGLYRGFGVSVQGIIIYRAAYFGFYD 198
Score = 27.5 bits (58), Expect = 0.087
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +3
Query: 273 PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 431
P + V+ + +Q S + ++ YK + + I K +G +F++G F+N++R
Sbjct: 232 PFDTVRRRMMMQ--SGRAKSEILYKSTLHCWATIYKTEGGNAFFKGAFSNILR 282
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 452 ERLGREVPDDVGEVTTPE 399
ER RE+PDD+ + P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -2
Query: 452 ERLGREVPDDVGEVTTPE 399
ER RE+PDD+ + P+
Sbjct: 553 ERANRELPDDLRQKVLPD 570
>AY375535-1|AAQ82648.1| 147|Apis mellifera doublesex protein.
Length = 147
Score = 21.0 bits (42), Expect = 7.5
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +3
Query: 111 VIPHPRVPQLPPRHIHLVKIT 173
+I P +LPP H H +T
Sbjct: 92 IITIPPTRKLPPLHPHTAMVT 112
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 20.6 bits (41), Expect = 10.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 387 PAPWGCGRRRRR 352
P P GC RRR R
Sbjct: 1 PGPNGCPRRRGR 12
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 309 HVSKQIAADQRYKGIVDAFVRIPK 380
++ K IAA +KG+ RIP+
Sbjct: 763 YIQKMIAAAAPFKGMETQDYRIPE 786
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,300
Number of Sequences: 438
Number of extensions: 2898
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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