Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30194
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   4.9  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   4.9  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   4.9  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 117 SYSFVTNPLTYCYYNMNK 64
           SY+F+    TY YY  N+
Sbjct: 23  SYNFLQEKTTYEYYENNQ 40


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 430 WQERAEQFGGRQKARLPKWFGERPGK 353
           + +R +  G R  A  P W  + PGK
Sbjct: 556 FSDRLKSRGIRTAAIWPLWCSQNPGK 581


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 117 SYSFVTNPLTYCYYNMNK 64
           SY+F+    TY YY  N+
Sbjct: 14  SYNFLQEKTTYEYYENNQ 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,131
Number of Sequences: 336
Number of extensions: 1077
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)