Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30191
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   1.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   3.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   8.6  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 453 KMYVQSLYVGHILGVFVQEYFPFLKGIL 370
           K+YV+ +++       + EY  F+KG++
Sbjct: 351 KLYVRRVFIMDNCEELIPEYLNFIKGVV 378


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 53  DRRIRLFLNILDLVA 9
           DRR+ LFL +L ++A
Sbjct: 571 DRRLELFLELLPMLA 585


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 382 KEREIFLNKYPQYVTNI 432
           KER +F N Y Q V +I
Sbjct: 125 KERNLFKNAYFQLVLSI 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,868
Number of Sequences: 336
Number of extensions: 3147
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)