Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30191
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0200 - 6672743-6673717,6676257-6676634,6677017-6677301,667...    28   5.1  
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811...    28   5.1  
06_02_0365 + 15190841-15190988,15191296-15191754,15192692-151927...    27   6.8  
03_02_0173 + 6138406-6138628,6139769-6139857,6139922-6140608,614...    27   6.8  
02_05_0391 + 28563242-28563302,28563714-28563931,28564563-285646...    27   6.8  

>10_02_0200 -
           6672743-6673717,6676257-6676634,6677017-6677301,
           6677420-6677570,6677696-6677930,6678689-6678764
          Length = 699

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +3

Query: 387 KGNILEQIPPICDQHTGIGHTFY*VQTEGLCPSRNSSR 500
           K   L++  PIC    GIG++ +  +  GL   +NSSR
Sbjct: 382 KTGALDENKPICGTTEGIGNSHHDNKLSGLSIMKNSSR 419


>04_04_0214 -
           23674270-23676858,23677574-23680843,23680941-23681119,
           23681200-23681559,23681645-23682086,23682199-23682332,
           23682479-23682680
          Length = 2391

 Score = 27.9 bits (59), Expect = 5.1
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
 Frame = +1

Query: 262 YRLNNHRKPVPP-----LEGIGFEYGFNSNILDGWLQYW 363
           + L+++R P PP     LEG+ F    +   LDG+LQYW
Sbjct: 442 FPLSHNRNPSPPRDLGELEGVEFP---DLPSLDGYLQYW 477


>06_02_0365 +
           15190841-15190988,15191296-15191754,15192692-15192782,
           15192902-15193003,15193126-15193228,15193548-15193685,
           15193912-15193974,15195042-15195124,15196312-15196411,
           15196640-15196717,15196834-15196941,15197987-15198067,
           15200179-15200220,15200221-15200283,15200426-15200482
          Length = 571

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 16/59 (27%), Positives = 31/59 (52%)
 Frame = +1

Query: 304 GIGFEYGFNSNILDGWLQYWAEEYPFKEREIFLNKYPQYVTNIQGLDIHFIKYRQKAYA 480
           G+GF+Y  N +I + WL +  E  P  E+E  +NK  + + N     + +++   + +A
Sbjct: 316 GLGFDYWVNLSIPEMWL-WHLENVP--EQEWSMNKIMRVLVNNNSNMLSYVENHNQFFA 371


>03_02_0173 +
           6138406-6138628,6139769-6139857,6139922-6140608,
           6140682-6140834,6140922-6141290
          Length = 506

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 190 KYHNDTSIRPFEIVFHDKMIADLRYRLNN 276
           K H+ T ++ FEI F+    A+  Y LNN
Sbjct: 120 KKHSGTGMKKFEIEFYGPSNANTYYHLNN 148


>02_05_0391 +
           28563242-28563302,28563714-28563931,28564563-28564637,
           28564730-28565264,28565343-28565523,28565586-28565724,
           28565826-28566067,28566157-28566322,28566591-28566698
          Length = 574

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 14/53 (26%), Positives = 26/53 (49%)
 Frame = +1

Query: 115 ELLASQNTEPAYKLDPNAWWGPECTKYHNDTSIRPFEIVFHDKMIADLRYRLN 273
           ++ A+  T+    L   A +G +   + N   +R F+I  H ++  D+R  LN
Sbjct: 82  QIQANNQTQEDELLALQAIYGDDLVIFDNKDGLRFFQISLHYQLAGDIRVYLN 134


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,902,221
Number of Sequences: 37544
Number of extensions: 317908
Number of successful extensions: 717
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)