Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30191
         (516 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19129| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.3  
SB_13756| Best HMM Match : Phospholip_A2_1 (HMM E-Value=2.1)           30   1.3  
SB_50643| Best HMM Match : Phosphodiest (HMM E-Value=0)                29   2.3  
SB_48808| Best HMM Match : DEAD (HMM E-Value=0.029)                    27   6.9  
SB_36419| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   6.9  
SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49)                   27   9.2  
SB_5214| Best HMM Match : SAP (HMM E-Value=0.8)                        27   9.2  
SB_35761| Best HMM Match : DUF720 (HMM E-Value=0.47)                   27   9.2  
SB_20238| Best HMM Match : Toxin_8 (HMM E-Value=0.66)                  27   9.2  

>SB_19129| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 918

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = +1

Query: 130 QNTEPAYKLDPNAWWGPECTKYHNDTSIRPFEIVFHDKMIADLRYRLNNHRKPVPPLEG 306
           ++ +P Y+  P A WGP   K     +  P  I F    I   RYR      PVP   G
Sbjct: 669 RHKKPGYEWRPEAAWGP---KKSGSLARMPTTIRFDPDPIVAHRYRKQGRPVPVPGKRG 724


>SB_13756| Best HMM Match : Phospholip_A2_1 (HMM E-Value=2.1)
          Length = 310

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 17/54 (31%), Positives = 26/54 (48%)
 Frame = -3

Query: 235 GKRSQRVVCWYHCGISCIPVPTKR*DPTCMLVLYFETPEVLLLDKTLPLTGRVH 74
           GK S ++ CW+   I C+ + T+    T +L +Y      L L   + L  RVH
Sbjct: 201 GKES-KLFCWHFMKICCVLIETQAIPKTTLLHVYSLAYSGLCLRNCVSLYSRVH 253


>SB_50643| Best HMM Match : Phosphodiest (HMM E-Value=0)
          Length = 471

 Score = 29.1 bits (62), Expect = 2.3
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
 Frame = +1

Query: 229 VFHDKMIADLRYRLNNHRKPVPPLEGIGFEYGFNS-----NILDGWLQYWAEEYPFKER- 390
           V+  + I +  +  NN R P P     GF YGF       N+ D W+ Y    YP  ER 
Sbjct: 331 VYKKEEIPEAFHYKNNRRVP-PIYVSAGFGYGFKPRRAWFNVSDDWV-YGYHGYPSDERM 388

Query: 391 -EIFLNKYPQYVT 426
             IF  + P + T
Sbjct: 389 GAIFYARGPAFKT 401


>SB_48808| Best HMM Match : DEAD (HMM E-Value=0.029)
          Length = 498

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -3

Query: 160 DPTCMLVLYFETPEVLLLDKTLPL 89
           DP+C   + + TPE+L+ D TL +
Sbjct: 315 DPSCPFKILYVTPEILVNDHTLQM 338


>SB_36419| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 170

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 15/44 (34%), Positives = 26/44 (59%)
 Frame = +1

Query: 379 FKEREIFLNKYPQYVTNIQGLDIHFIKYRQKAYAHQEIVPVIDS 510
           F  R+IF+ K+ + V N    D HF + + KA + +++ PVI +
Sbjct: 12  FYLRDIFVEKHWKSVINRSICD-HFFEAQSKASSPEDVPPVIST 54


>SB_46519| Best HMM Match : DUF720 (HMM E-Value=0.49)
          Length = 1205

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 211 CWYHCGISCIPVPT 170
           CW HC  S IP+PT
Sbjct: 939 CWKHCIASSIPLPT 952


>SB_5214| Best HMM Match : SAP (HMM E-Value=0.8)
          Length = 660

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 211 CWYHCGISCIPVPT 170
           CW HC  S IP+PT
Sbjct: 369 CWKHCIASSIPLPT 382


>SB_35761| Best HMM Match : DUF720 (HMM E-Value=0.47)
          Length = 414

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 211 CWYHCGISCIPVPT 170
           CW HC  S IP+PT
Sbjct: 148 CWKHCIASSIPLPT 161


>SB_20238| Best HMM Match : Toxin_8 (HMM E-Value=0.66)
          Length = 491

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 211 CWYHCGISCIPVPTKR*DPTCMLVLY 134
           CW H G S IPV     DP C++  Y
Sbjct: 242 CWAHSGKSTIPVTES--DPPCIVKSY 265


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,045,894
Number of Sequences: 59808
Number of extensions: 356909
Number of successful extensions: 872
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)