Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30191
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64852-7|AAB04970.1|  452|Caenorhabditis elegans Hypothetical pr...    75   4e-14
Z74029-6|CAM84812.1|  457|Caenorhabditis elegans Hypothetical pr...    44   5e-05
Z32683-10|CAA83625.1|  381|Caenorhabditis elegans Hypothetical p...    29   1.5  
Z81502-5|CAB04108.2|  672|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AF003137-3|AAB93640.1|  625|Caenorhabditis elegans Hypothetical ...    29   2.0  
Z75713-9|CAB00053.1|  235|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z75713-8|CAB00056.1|  234|Caenorhabditis elegans Hypothetical pr...    29   2.6  
M73827-1|AAA27983.1|  234|Caenorhabditis elegans casein kinase I...    29   2.6  
Z49912-1|CAA90140.1|  588|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>U64852-7|AAB04970.1|  452|Caenorhabditis elegans Hypothetical
           protein W01A11.1 protein.
          Length = 452

 Score = 74.5 bits (175), Expect = 4e-14
 Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 3/148 (2%)
 Frame = +1

Query: 70  MGGLFRLVVASCLTIELLASQNTEPAYKL--DPNAWWGPECTKYHNDTSIRPFEIVFHDK 243
           MG L  ++V   + +   A  N  P  ++  + N ++G    K  N T I+PF++     
Sbjct: 1   MGILKLILVPVAIGVLAAAVWNLLPEKEINVEENNYYGSGKAKPDN-TEIKPFKVNVEQS 59

Query: 244 MIADLRYRLNNHRKPVPPLEGIG-FEYGFNSNILDGWLQYWAEEYPFKEREIFLNKYPQY 420
           +I DL++RL N R     LE    F YGFNS  L     YW  +Y ++++E  +N++PQ+
Sbjct: 60  VIDDLKHRLQNARISHSVLEDSDDFYYGFNSKQLLKLRDYWLNKYDWRKQEATINQFPQF 119

Query: 421 VTNIQGLDIHFIKYRQKAYAHQEIVPVI 504
            T I+GL +HF+  +    +++ + P++
Sbjct: 120 KTEIEGLQVHFLHVKPPK-SYKNVKPIL 146


>Z74029-6|CAM84812.1|  457|Caenorhabditis elegans Hypothetical
           protein C45B11.6 protein.
          Length = 457

 Score = 44.4 bits (100), Expect = 5e-05
 Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
 Frame = +1

Query: 82  FRLVVASCLTI--ELLASQNTEPAYKLDPNAWWGPECTKYHNDTSIRPFEIVFHDKMIAD 255
           F +VV S  +I   +   +   P  ++DP+ +W  +  +  +DT I  F I   +  +++
Sbjct: 7   FSVVVISIFSILLSIYIHKPDFPPLEIDPDDYWKLDDPEKDDDT-IYSFTIDIKESEVSN 65

Query: 256 LRYRLNNHRKPVPPLEGIGFEYGFNSNILDGWLQYWAEEYPFKEREIFLNKYPQYVTNIQ 435
            + +L + R  +P L    ++   N       L+     + +K+ + FLN + QY T I+
Sbjct: 66  FKEKLESERF-LPTLYDTNYDNYLNE------LKQVLLGFNWKQHQHFLNTFKQYKTEIE 118

Query: 436 GLDIHFIK 459
           GL IHF++
Sbjct: 119 GLKIHFLR 126


>Z32683-10|CAA83625.1|  381|Caenorhabditis elegans Hypothetical
           protein R07E5.3 protein.
          Length = 381

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = -2

Query: 140 SVF*DARSSIVRQDATTNRKSPPMMVSNCDRRIRLFLNI 24
           +VF  A ++ + Q    + ++PP+ V+ CD+R  L LNI
Sbjct: 226 AVFQPAITAAINQQLEASTEAPPLDVNICDQRAVLKLNI 264


>Z81502-5|CAB04108.2|  672|Caenorhabditis elegans Hypothetical
           protein F14B6.5 protein.
          Length = 672

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -1

Query: 486 LMGISLLSVLNKMYVQSLYVGHILGVFVQEYFPFLKGILFCPILKPA 346
           + G+++LSVL   +  +L+    LGV   + F  L G L C +LK A
Sbjct: 15  IRGLAILSVLGFHFYPALFPNGYLGV---DQFFVLSGFLMCMLLKRA 58


>AF003137-3|AAB93640.1|  625|Caenorhabditis elegans Hypothetical
           protein C27A12.2 protein.
          Length = 625

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
 Frame = +1

Query: 130 QNTEPAYKLDPNAWWGPECTKYHNDTSIRPFEIVFHDKMIADLRYRLNNHRKPVPPLEGI 309
           Q  EP  + +P   +  EC++     S    E+V H   +    Y+     K +P L+  
Sbjct: 171 QVAEPTIQAEPCQIY--ECSEMCGFQSYEEAEVVEH---MTVTHYQQTKKSKEIPKLKNP 225

Query: 310 GFEYGFN-SNILDGWL--QYWAEEYPFKE--REIFLNKYPQYVTNIQGLDIHFIKYRQKA 474
           GF   FN   + +G +   +  E  P  E   E ++ + P  +     +    I Y    
Sbjct: 226 GFSINFNYFQVQNGLILQDFNGEPEPIYEFYEEQYVQQVPTEIEETPTIKQQSIPYENLH 285

Query: 475 YAHQEIVP 498
           + H E  P
Sbjct: 286 FEHVEAAP 293


>Z75713-9|CAB00053.1|  235|Caenorhabditis elegans Hypothetical
           protein T01G9.6b protein.
          Length = 235

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -1

Query: 168 SVRIQLVCWFCILRRQKFYC*TRRYH*PEESTHDGFKLRSSNSFIFKY 25
           S  +  + WFC LR  +F+C        EE   D F L   N  + KY
Sbjct: 4   SEEVSWITWFCGLRGNEFFC-----EVDEEYIQDRFNLTGLNEQVPKY 46


>Z75713-8|CAB00056.1|  234|Caenorhabditis elegans Hypothetical
           protein T01G9.6a protein.
          Length = 234

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -1

Query: 168 SVRIQLVCWFCILRRQKFYC*TRRYH*PEESTHDGFKLRSSNSFIFKY 25
           S  +  + WFC LR  +F+C        EE   D F L   N  + KY
Sbjct: 4   SEEVSWITWFCGLRGNEFFC-----EVDEEYIQDRFNLTGLNEQVPKY 46


>M73827-1|AAA27983.1|  234|Caenorhabditis elegans casein kinase II
           beta subunit protein.
          Length = 234

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 16/48 (33%), Positives = 21/48 (43%)
 Frame = -1

Query: 168 SVRIQLVCWFCILRRQKFYC*TRRYH*PEESTHDGFKLRSSNSFIFKY 25
           S  +  + WFC LR  +F+C        EE   D F L   N  + KY
Sbjct: 4   SEEVSWITWFCGLRGNEFFC-----EVDEEYIQDRFNLTGLNEQVPKY 46


>Z49912-1|CAA90140.1|  588|Caenorhabditis elegans Hypothetical
           protein T24F1.2 protein.
          Length = 588

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = -1

Query: 219 GSYAGIIVVFRAFRSPPSVRIQLVCWFCILRRQKFYC*TRRYH*PEESTHDGF 61
           G  A + ++++A R  P ++  + CWFC    +  Y     +  P    ++GF
Sbjct: 8   GVIASVPILYKAIR--PRIKTSVECWFCRKSTKVEYQQRNSFTCPSCEQYNGF 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,698,435
Number of Sequences: 27780
Number of extensions: 273474
Number of successful extensions: 653
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)