Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30190
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pomb... 29 0.41
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 29 0.55
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 1.3
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 27 1.3
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 1.3
SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium tra... 27 2.2
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 26 2.9
SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr 3|||Ma... 26 3.8
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 26 3.8
SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces ... 26 3.8
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 26 3.8
SPAC3A12.17c |cys12|cys1b|cysteine synthase Cys12|Schizosaccharo... 25 5.1
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 25 5.1
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 25 5.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 25 6.7
SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr 2||... 25 6.7
SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyce... 25 6.7
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 25 8.9
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 25 8.9
SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces p... 25 8.9
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 25 8.9
>SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 29.1 bits (62), Expect = 0.41
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 4/103 (3%)
Frame = +1
Query: 94 VSNWP-YRTTPLVLPGAK-VRREPGPTESYLRHHP--NPAMRAPPNHDYRDTLMKQKVLH 261
V N+P Y+T P AK +EP + Y N + ++P ++Y H
Sbjct: 409 VRNYPFYQTNQGSNPPAKRFTQEPPSSSLYSLSESSINYSTQSPMYYNYNYPQPSFPPFH 468
Query: 262 KQFNSPINLYSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYR 390
+N I YS+ N Q S PP+ +DP S+ YR
Sbjct: 469 PIYNDSIGYYSQANPQMYYANQVSAPPPQ--GSFDP-NSKFYR 508
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 28.7 bits (61), Expect = 0.55
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = +1
Query: 379 ETYRALQEDGLPDAATEL--SAPVATKVFTAPTSKRP---APTPKPTK 507
++ + ++E +PD E SAP +TK AP +K P +P PKP K
Sbjct: 151 DSSKPIEEKPMPDLGAEQKESAPSSTK--PAPDAKEPEFSSPKPKPAK 196
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 1.3
Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +1
Query: 319 RQQTSPLP-PRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTP 495
RQ+ +P P P +A P + T + +Q A + V+ + T P P
Sbjct: 1253 RQKGTPSPAPVNSATSTPVAAPTAQQIQPGKQASAVSSNVPAVSASISTPPAVVPTVQHP 1312
Query: 496 KPTKQ 510
+PTKQ
Sbjct: 1313 QPTKQ 1317
Score = 25.0 bits (52), Expect = 6.7
Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 3/79 (3%)
Frame = +1
Query: 274 SPINLYSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATK 453
+P+ + + N+ ++P PP P +Q PA + AP
Sbjct: 1456 APVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAP 1515
Query: 454 VFTAPTSKRP---APTPKP 501
T P S+ P+P P
Sbjct: 1516 SSTLPPSQSSFAHVPSPAP 1534
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 27.5 bits (58), Expect = 1.3
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Frame = +1
Query: 211 PPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPP------RPAAQYDPA 372
P N + + + QK +HK+F+ L + + + +PL P R AAQ DPA
Sbjct: 552 PSNLSKKLSGLVQKKVHKKFDKDGRLKEISQFSKTTIKPETPLTPTTTPTPRTAAQEDPA 611
Query: 373 KSETYRALQEDG 408
+ T +G
Sbjct: 612 EETTDALASAEG 623
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.5 bits (58), Expect = 1.3
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = +1
Query: 289 YSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAP 468
YS + Q T+ AAQY A + + T ++APVA P
Sbjct: 336 YSTPSAGYQTVQTTTTTTEAAAAQYPQAAFPPPPVMPQPAAAAVTTPVAAPVAAAAAAVP 395
Query: 469 TSKRPAPTP 495
PAP P
Sbjct: 396 VPP-PAPAP 403
>SPACUNK4.07c |cta4|sev4, SPAPYUK71.01|P-type ATPase, calcium
transporting Cta4 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1211
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 280 INLYSEQ-NIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKV 456
+ +Y +Q +A T P+PP + P + +R ++GL +L A+ V
Sbjct: 862 MGVYEKQIQLAKRFNLPTPPVPPALCHAFPPGPNNPHREKTQEGLNKVLEDLETKKASDV 921
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 26.2 bits (55), Expect = 2.9
Identities = 25/120 (20%), Positives = 40/120 (33%)
Frame = +1
Query: 157 PGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSP 336
P PT+SY +++ P R +K K F P + + + ++P
Sbjct: 72 PHPTKSYQQYYQKPTGNTVDEDKSRVPDFSKK---KSFVPPKPAIPKGKVLSLGGNTSAP 128
Query: 337 LPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTKQSD 516
+P + + TE AP T T + P P PTK +D
Sbjct: 129 KSTKPISISLGGTKAPTTTKPAAPAAQSKTETPAPKVTSESTKKETAAPPPQETPTKSAD 188
>SPCC24B10.15 |||PINc domain|Schizosaccharomyces pombe|chr
3|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 3.8
Identities = 23/86 (26%), Positives = 32/86 (37%)
Frame = -1
Query: 264 LVQHLLFHKGITVVVVRRCPHCWVGVMTQVTLCGARLPSDLSSREHERSGAVRPVADNFF 85
L+ HL + + + RCP V V+ L + L S G + A NF
Sbjct: 76 LLSHLSLCQNLIEFLTARCPRLVV-VLPWTVL---QELDGLKSESSSTCGYLARQAHNFL 131
Query: 84 FRMFRILVSVREEVGVERHCYTCRYG 7
+ FR VS V HC + G
Sbjct: 132 LQCFRSNVSSLRGQKVHEHCSSTEKG 157
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 25.8 bits (54), Expect = 3.8
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 1/70 (1%)
Frame = +1
Query: 10 IPTSVTMSLNPNFFPN-GYQDPKHPEEEVVSNWPYRTTPLVLPGAKVRREPGPTESYLRH 186
IP SV S NF Q+P + S P P+ +V ++P P + +
Sbjct: 159 IPPSVEASSGQNFNQGIASQNPAISTSNLPSTTPLYIPPVNYGANQVSQQPNPQLPGVSN 218
Query: 187 HPNPAMRAPP 216
+ NP+ + P
Sbjct: 219 YYNPSATSKP 228
>SPBC582.05c |brc1||BRCT domain protein Brc1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 878
Score = 25.8 bits (54), Expect = 3.8
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = +1
Query: 286 LYSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATEL-SAPVATKVFT 462
L E + + + PP P P+K A +D LP AT+L + K
Sbjct: 510 LQDEGRLEIDAKSSKTNTPPSPLLVGTPSKESLKEASSDDELPVLATKLVDNVIKEKSPL 569
Query: 463 APTSKRPAPTPKPT 504
+ T K P+ K T
Sbjct: 570 SLTPKVVVPSHKET 583
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 25.8 bits (54), Expect = 3.8
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = +1
Query: 289 YSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELS 435
++ I+ S SPL AQ+DP+K R++ P LS
Sbjct: 377 FNSDQISESNNFNASPLSTPLKAQFDPSKPALNRSIDHQKTPQHKRYLS 425
>SPAC3A12.17c |cys12|cys1b|cysteine synthase
Cys12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 395
Score = 25.4 bits (53), Expect = 5.1
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Frame = +1
Query: 124 LVLPGAKVRR-EPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQ 300
L L GA V+R P P H N A R NH +++ + QF +P N +
Sbjct: 147 LELLGAHVQRVTPAPIVDP-NHFVNTARRNAANHTVDESIPGKGYFANQFENPANWQAHF 205
Query: 301 N 303
N
Sbjct: 206 N 206
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 25.4 bits (53), Expect = 5.1
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +1
Query: 106 PYRTTPLVLPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDTLMKQKVLHKQ 267
P PL P ++ R+P P S P+ APP H R+ + + H +
Sbjct: 44 PVSKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPPTHQ-REASPVKNIEHSE 96
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.4 bits (53), Expect = 5.1
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +1
Query: 340 PPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTKQS 513
PPRP A + + + + LP ++ +SA A KRP P P P++++
Sbjct: 271 PPRPIAPV--SMNPAINSTSKPPLPPPSSRVSAAAL-----AANKKRPPPPPPPSRRN 321
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.0 bits (52), Expect = 6.7
Identities = 17/57 (29%), Positives = 23/57 (40%)
Frame = +1
Query: 331 SPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKP 501
S LPP PA P KS +P ++ P ++ A TS RP+ P
Sbjct: 169 SSLPP-PAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
>SPBC609.01 |||ribonuclease II |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1157
Score = 25.0 bits (52), Expect = 6.7
Identities = 19/80 (23%), Positives = 35/80 (43%)
Frame = +1
Query: 262 KQFNSPINLYSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAP 441
+QF+ PIN + ++ + TSP+ A +E++ A + G+ A
Sbjct: 110 QQFSKPINESGTGTMGPAVGELTSPVMKNRAESIFSPVTESFEAFTQ-GMQTTPQRAGAG 168
Query: 442 VATKVFTAPTSKRPAPTPKP 501
V+T T+ T +R + P
Sbjct: 169 VSTA--TSHTRRRSSAGTDP 186
>SPAC6G10.05c |||TRAPP complex subunit Trs120 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1210
Score = 25.0 bits (52), Expect = 6.7
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = -1
Query: 141 SSREHERSGAVRPVADN-FFFRMFRILVSVREEVGVE 34
+S + RS ++P ADN FR+ R ++S EE+ ++
Sbjct: 980 ASTDESRSVLIKPKADNVILFRLKRFIMS-SEEINLD 1015
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 24.6 bits (51), Expect = 8.9
Identities = 16/83 (19%), Positives = 35/83 (42%)
Frame = +1
Query: 256 LHKQFNSPINLYSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELS 435
L K+ + +N E ++ ++ ++ + + ++ T L E + + LS
Sbjct: 392 LVKEIDDQLNTLEELSMGSNQNSNSAMDQLAKVNERNRRRNHTEIRLAEQRMNEERRRLS 451
Query: 436 APVATKVFTAPTSKRPAPTPKPT 504
A +APTS +P+P+
Sbjct: 452 AAATATPMSAPTSVLTGTSPQPS 474
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +1
Query: 28 MSLNPNFFPNGYQDPKHPEEEVV 96
++LNP FF N + + P E+ V
Sbjct: 461 LALNPEFFKNANGEQQAPNEQAV 483
>SPBC337.03 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 387
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +1
Query: 289 YSEQNIANSIRQQTSPLPPRPAAQYDPAKSET 384
Y+ + N SPLPP + Y + ET
Sbjct: 311 YTSNIVENPSEDNLSPLPPPASGPYSQEEEET 342
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 24.6 bits (51), Expect = 8.9
Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 3/80 (3%)
Frame = +1
Query: 271 NSP-INLYSEQNIANSIRQQTSPLPPR--PAAQYDPAKSETYRALQEDGLPDAATELSAP 441
N+P IN + +N S TS + PA Y ++ + + +P A + P
Sbjct: 5 NTPSINRRNNENPPQSSLPTTSGIVYNMFPACPYPHVQNPAFHGSVD--VPQVAQKAFDP 62
Query: 442 VATKVFTAPTSKRPAPTPKP 501
A V + RP P P P
Sbjct: 63 QAATVSESANVSRPTPAPVP 82
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.310 0.128 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,875,387
Number of Sequences: 5004
Number of extensions: 38580
Number of successful extensions: 116
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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