Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30190
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 36 0.026
SB_32715| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.060
SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.080
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 33 0.18
SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.24
SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_25705| Best HMM Match : PH (HMM E-Value=2e-17) 31 0.74
SB_33399| Best HMM Match : Ank (HMM E-Value=0) 30 1.3
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_39039| Best HMM Match : Drf_FH1 (HMM E-Value=6.4) 29 1.7
SB_1121| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_58030| Best HMM Match : cIII (HMM E-Value=7.7) 29 3.0
SB_8486| Best HMM Match : Granulin (HMM E-Value=0) 29 3.0
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_36274| Best HMM Match : SH2 (HMM E-Value=9.6e-05) 28 4.0
SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_40142| Best HMM Match : DUF827 (HMM E-Value=1.2) 28 4.0
SB_47875| Best HMM Match : rve (HMM E-Value=3.3e-16) 28 5.3
SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23) 28 5.3
SB_20117| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 28 5.3
SB_1703| Best HMM Match : Extensin_2 (HMM E-Value=0.26) 28 5.3
SB_47910| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_44616| Best HMM Match : rve (HMM E-Value=0.012) 27 6.9
SB_30003| Best HMM Match : DUF906 (HMM E-Value=0) 27 6.9
SB_57625| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 27 6.9
SB_40658| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_31266| Best HMM Match : PKI (HMM E-Value=1) 27 6.9
SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 27 9.2
SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021) 27 9.2
SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_48142| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_45877| Best HMM Match : Borrelia_orfA (HMM E-Value=0.23) 27 9.2
SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 35.5 bits (78), Expect = 0.026
Identities = 31/98 (31%), Positives = 38/98 (38%)
Frame = +1
Query: 214 PNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYRA 393
P+H L Q++ H Q P L S+Q N T+P P A P K T
Sbjct: 12 PHHQRPPLLPSQQIPHHQ--RPPLLPSQQLPHNRTTTPTTPTTTTPPATTTPTKP-TNTT 68
Query: 394 LQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTK 507
P T + P AT T PT+ P T PTK
Sbjct: 69 PPATTTPTKPTTTTPP-ATTTPTTPTTTTPPATTTPTK 105
Score = 31.9 bits (69), Expect = 0.32
Identities = 30/111 (27%), Positives = 41/111 (36%), Gaps = 3/111 (2%)
Frame = +1
Query: 184 HHPNPAM---RAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPPRPA 354
HH P + + P+H L Q++ H + +P + A + T P P
Sbjct: 13 HHQRPPLLPSQQIPHHQRPPLLPSQQLPHNRTTTPTTPTTTTPPATTT--PTKPTNTTPP 70
Query: 355 AQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTK 507
A P K T P T + P AT T PT+ P T PTK
Sbjct: 71 ATTTPTKPTTTTP-PATTTPTTPTTTTPP-ATTTPTKPTTTTPPATTTPTK 119
>SB_32715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 122
Score = 34.3 bits (75), Expect = 0.060
Identities = 21/68 (30%), Positives = 29/68 (42%)
Frame = +1
Query: 286 LYSEQNIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTA 465
L Q S PLP P +YD A +E Y D D A+ +S PV ++ +
Sbjct: 47 LLQAQATPGSRNSADPPLPHDPDTEYDSAVTEAYGDKATDS-EDEASPVSTPVTPQLRRS 105
Query: 466 PTSKRPAP 489
+RP P
Sbjct: 106 MRDRRPPP 113
>SB_33596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 881
Score = 33.9 bits (74), Expect = 0.080
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 13 PTSVTMSLNPNFFPNGYQDPKHPEEEVVSNWPYRTTPL-VLPGAKVRREPGPTESYLRHH 189
P T P+ P + P HP S+ PY T L G + REP P S+ H
Sbjct: 474 PHHATSYNAPSGMPTHREPPPHPS--FASHQPYHVTSCDALSGMQTHREPPPHPSFASHQ 531
Query: 190 P 192
P
Sbjct: 532 P 532
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 64 QDPKHPEEEVVSNWPYRTTPL-VLPGAKVRREPGPTESYLRHHP 192
+ P HP S+ PY T L G + REP P S+ H P
Sbjct: 520 EPPPHPS--FASHQPYHVTSCDALSGMQTHREPPPHPSFASHQP 561
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 32.7 bits (71), Expect = 0.18
Identities = 40/163 (24%), Positives = 56/163 (34%), Gaps = 11/163 (6%)
Frame = +1
Query: 52 PNGYQDPKHPEEEVVSNWPYRTTPLVLPGAKVRREPG-PTESYLRH-HPNPAMRAPPNHD 225
P ++ + EEE + P + P + R PT+ L P RA P
Sbjct: 311 PEEEEEEEEEEEERPTPRPTKAKPTAIIRKPTERPTKKPTKPLLPEVEPEEEERATPRPT 370
Query: 226 Y-RDTLMKQKVLHKQFNSPIN-LYSEQNIANSIRQQTSPLPPRPAA-----QYDPAKSET 384
+ T +K++ + P L E A R P +P P K T
Sbjct: 371 KAKPTTIKRRPTERPTKKPTKPLLPEVESAEEERATPGPTKAKPTTIKRRPTERPTKKTT 430
Query: 385 YRALQEDGLPDAATELSAPVATKVFTAPTSKRPA--PTPKPTK 507
L E+ + E P TK +RP PT KPTK
Sbjct: 431 KPLLPEEEEEEEEEERPTPKPTKAKPTTIKRRPTEIPTKKPTK 473
>SB_16861| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2214
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 322 QQTSPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVAT 450
QQ SP PP PA + DP+K + E P A + P T
Sbjct: 1537 QQISPSPPSPAGKRDPSKYQKLEGETEPDPPKPAPKKKGPKKT 1579
>SB_47601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 652
Score = 31.5 bits (68), Expect = 0.43
Identities = 31/108 (28%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +1
Query: 205 RAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPPRPAAQYDPAKS-- 378
R+ ++ D +++K HK+ +P SE+ ++TSP PPRPA D A S
Sbjct: 182 RSGSGNEASDNAVEEK--HKESTTPSPKKSERE------KKTSPTPPRPAPARDRAASGP 233
Query: 379 -ETYRALQEDGLPDAATELSAPVATKVFTAPT-SKRPAPTPKPTKQSD 516
D L A T+ AP S +PA T +P K +
Sbjct: 234 GPKPAVKPRDRLATAPPGRPPAPHTREKIAPVPSSKPAGTKEPAKDEE 281
>SB_43620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1680
Score = 31.1 bits (67), Expect = 0.56
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +1
Query: 289 YSEQNIANSIRQQTSPLP-PRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTA 465
Y + A Q +P P P P +PA + Q A T+ PV + A
Sbjct: 707 YPTLSTAAQPTQAQNPAPTPAPTQAQNPAPTPAPTQAQNPAPTPAPTQAQPPVPS---PA 763
Query: 466 PT-SKRPAPTPKPTK 507
PT ++ PAP+P PT+
Sbjct: 764 PTQAQPPAPSPAPTQ 778
>SB_11571| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 30.7 bits (66), Expect = 0.74
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Frame = +1
Query: 265 QFNSPINLYSEQNIANSIRQQTSPL----PPRPAAQYDPAKSETYRALQEDGLPDAATEL 432
Q N+P L +N+ R T P PRP P +S T + A +
Sbjct: 73 QSNTPRPLTPPSRQSNNPRPHTPPSCQSNTPRPLTP-PPRQSNTTQPPAYPPRQSYALQQ 131
Query: 433 SAPVATKVFTAPTSKRPAPTPKP 501
+ P+ T PT +RP+ TP+P
Sbjct: 132 TTPLHTSQPLRPTPRRPSDTPQP 154
>SB_25705| Best HMM Match : PH (HMM E-Value=2e-17)
Length = 409
Score = 30.7 bits (66), Expect = 0.74
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Frame = +1
Query: 322 QQTSPL-PPRPAAQYDPAKSETYRALQEDGLPDA-ATELSAPVATKVF-TA--PTSKRPA 486
++ P+ PPRP +P + ETY +QE P A A++ A + + + TA T +P+
Sbjct: 249 EEAPPIQPPRPPKS-EPIQGETYDLVQEAAPPVALASQSEAALGDEFYDTAEEETESKPS 307
Query: 487 PTPKPTKQS 513
P P K++
Sbjct: 308 PPPPGEKKA 316
>SB_33399| Best HMM Match : Ank (HMM E-Value=0)
Length = 1416
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +1
Query: 223 DYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPPRP 351
DY D + + K NS LY E N +S TSP PP P
Sbjct: 1355 DYADIGLPKGPRVKLLNSTRRLYPEVNEFSSATTPTSPPPPNP 1397
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.5 bits (63), Expect = 1.7
Identities = 25/99 (25%), Positives = 34/99 (34%), Gaps = 4/99 (4%)
Frame = +1
Query: 76 HPEEEVVSNWPYRTT--PLVLPGAKVRREPG--PTESYLRHHPNPAMRAPPNHDYRDTLM 243
H + N PY+ T P P + +P PT N P N
Sbjct: 199 HQPTNLPPNQPYKQTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPTNQPTN 258
Query: 244 KQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPPRPAAQ 360
+ Q N P NL ++Q QT+ P +PA Q
Sbjct: 259 QTNQPTNQPNQPTNLPTDQPTNQPANLQTTHAPSQPADQ 297
>SB_39039| Best HMM Match : Drf_FH1 (HMM E-Value=6.4)
Length = 254
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 10/66 (15%)
Frame = +1
Query: 337 LPPRPAAQYDPAKSETYRALQEDGL--PDAATELSAPVATKVFT------APTSKR--PA 486
LPP P Q A + RAL ED PD + A + + T P + R PA
Sbjct: 148 LPPAPELQIMVAMEKRLRALLEDSTLNPDVRMQRYAQLYNEYRTMGRLAQLPGASRAAPA 207
Query: 487 PTPKPT 504
PTP+PT
Sbjct: 208 PTPQPT 213
>SB_1121| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 256 LHKQFNSPINLYSEQNIANSIRQQTSPLPPRPAAQYDPAKSET 384
+H ++P YS +I +SI QT+P P YD + T
Sbjct: 167 IHDSISTPTTPYSPLHIHDSIHTQTTPNPRLHTHTYDSISTHT 209
>SB_58030| Best HMM Match : cIII (HMM E-Value=7.7)
Length = 167
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/69 (23%), Positives = 30/69 (43%)
Frame = -1
Query: 219 VRRCPHCWVGVMTQVTLCGARLPSDLSSREHERSGAVRPVADNFFFRMFRILVSVREEVG 40
V + P G+ + C A +P +++ H R +P+ F+ +I ++V
Sbjct: 63 VAKLPVRMFGIRYEEATCAAHVPCTINNSPHSRLNK-QPIPSRFYPVFDKIGLTVAGYQP 121
Query: 39 VERHCYTCR 13
R CY C+
Sbjct: 122 GTRWCYRCK 130
>SB_8486| Best HMM Match : Granulin (HMM E-Value=0)
Length = 878
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = -2
Query: 422 AASGRPSSCSARYVSDLAGSYC-----AAGLGGRGEVCCLIEFAMFCSEYRLIGELNCLC 258
AA+ RP + A Y++ GS+C L CC + A+ CS+ G+ C C
Sbjct: 640 AANNRPGASGANYITCNDGSHCYDYETCCELSTGSYGCCPLPNAVCCSD----GKHCCPC 695
Query: 257 NTFCFIRVS 231
C I S
Sbjct: 696 GYHCDISSS 704
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = +1
Query: 331 SPLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPT 492
+P P P A ++T P A T+ + AT T PT K P PT
Sbjct: 35 TPTKPSPTTPTSTAPTQTTPTPTTPS-PTAPTQTTPTPATPTPTTPTPKTPTPT 87
>SB_36274| Best HMM Match : SH2 (HMM E-Value=9.6e-05)
Length = 292
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 343 PRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKR 480
P P + + ++SET L+ED + L AP +K T P S++
Sbjct: 190 PSPIEEENSSESETEELLREDKMNSDKDMLLAPDKSKSQTLPLSRK 235
>SB_31699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6119
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 7/48 (14%)
Frame = +1
Query: 394 LQEDGLPDAATEL----SAPVATKVFTA---PTSKRPAPTPKPTKQSD 516
++ED L TE+ + P TK+ T P+ + PAP PKP S+
Sbjct: 4609 IEEDELDAEPTEVEPAPAEPTPTKIQTEVSKPSKREPAPAPKPVFASE 4656
>SB_40142| Best HMM Match : DUF827 (HMM E-Value=1.2)
Length = 334
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 436 APVATKVFTAPTSKRPAPTPKPTKQSD 516
A +T +PTS+ P P P+P K+SD
Sbjct: 191 ATPSTPSTPSPTSETPRPRPQPPKRSD 217
>SB_47875| Best HMM Match : rve (HMM E-Value=3.3e-16)
Length = 488
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -1
Query: 123 RSGAVRPVADNFFFRMFRILVSVREEVGVERHCYTCRYG 7
++ A PVADNF R +I V + + V + CR G
Sbjct: 53 KNEATLPVADNFKDRFQQIQVEIEHMIAVLQQMELCRSG 91
>SB_31082| Best HMM Match : Motilin_ghrelin (HMM E-Value=0.23)
Length = 565
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 358 QYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTKQ 510
Q DP E + +E P + S P KV + P+S+ P+ +P+ + Q
Sbjct: 505 QPDPKPVEPNQQQEEPEKPVSPKSQSRPSTPKVGSRPSSRPPSGSPRQSPQ 555
>SB_20117| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 27.9 bits (59), Expect = 5.3
Identities = 25/108 (23%), Positives = 36/108 (33%), Gaps = 1/108 (0%)
Frame = +1
Query: 193 NPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPPRPAAQYDPA 372
NPA PN+ + + + N+P + N A ++P P PA+ P
Sbjct: 3 NPASNPKPNNPSSNPKSNNPAFNPKSNNPASNPKPNNPA------SNPKPNNPASNPKPN 56
Query: 373 K-SETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPTKQS 513
S + P S P + P PA PKP S
Sbjct: 57 NPSSNPKPNNPSSNPKPNNPSSNPKPNNPSSNPKPNNPASNPKPNNPS 104
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 27.9 bits (59), Expect = 5.3
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Frame = +1
Query: 70 PKHPEEEVVSNWPYRTTPLV----LPGAKVRREPGPTESYLRHHPNPAMRAPPNHDYRDT 237
P+ P N P R P V P +RRE G T+S+ P P R P D +
Sbjct: 697 PQIPTRTGSVNKPSRAPPPVPNHPSPAVPLRRE-GDTKSFAPQRPPPPTRTPSGKDRPHS 755
Query: 238 LMKQKVLH 261
LH
Sbjct: 756 TTATPTLH 763
>SB_1703| Best HMM Match : Extensin_2 (HMM E-Value=0.26)
Length = 307
Score = 27.9 bits (59), Expect = 5.3
Identities = 39/177 (22%), Positives = 67/177 (37%), Gaps = 13/177 (7%)
Frame = +1
Query: 4 TSIPTSVTMSLNPNFFPNGYQDPKHPEEEVVSNW--PYRTTPLVLPGAKVRREPGPTESY 177
+ IPT LNP+ ++P+ + + W P + TP + A+ R G +S
Sbjct: 107 SQIPTWTAPELNPHVDSATSRNPRGQRQSKIPPWTAPQQETP--VESARARSPRGQHQSQ 164
Query: 178 LRHHPNPAMRAPPNHDYRDTLMKQKVLHKQFNSPINLYSEQNIANSIR------QQTSPL 339
+ P + PP R + H P + +S R Q+ S +
Sbjct: 165 IPTWTAP-QQDPPVDSAR--ARSPRGQHHSKKPPWKAPEQDPPVDSTRAKSPRGQRHSKI 221
Query: 340 PPRPAAQYDP----AKSETYRALQEDGLPD-AATELSAPVATKVFTAPTSKRPAPTP 495
PP A + P A++ + R + +P A E PV + +P +R + P
Sbjct: 222 PPWTAPEQGPPVDSARASSPRGQRHSKIPPWTAPEQETPVESARARSPRGQRQSKIP 278
>SB_47910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 486
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 248 KRCCTSNSTLQSIYTRNRTLQTLS 319
+ CC + +TL+ I T R LQT+S
Sbjct: 388 QHCCGNRATLEKILTFGRYLQTMS 411
>SB_44616| Best HMM Match : rve (HMM E-Value=0.012)
Length = 1189
Score = 27.5 bits (58), Expect = 6.9
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 9/120 (7%)
Frame = +1
Query: 184 HHPNPAMRAPPNHDYRDT--LMKQKVLHKQFNSPINLYSEQN-IANSIRQQTSPLPPRP- 351
H P P YR+ ++ ++ S +NL+S+ NS +Q + R
Sbjct: 424 HGPGDVFVFYPGEGYRNVHVILGYDTAADEYPSHLNLFSDDGGTYNSGKQVGAQANVRSS 483
Query: 352 -AAQYDPAKSET--YRALQEDGL--PDAATELSAPVATKVFTAPTSKRPAPTPKPTKQSD 516
A PA + L ED + D A + +P + P + P PTP T++SD
Sbjct: 484 IAGAGGPAMEAQAEFTKLLEDAIIENDIAQNVQSPGRSSPSFFPMALSPLPTPLATEESD 543
>SB_30003| Best HMM Match : DUF906 (HMM E-Value=0)
Length = 2276
Score = 27.5 bits (58), Expect = 6.9
Identities = 31/127 (24%), Positives = 52/127 (40%), Gaps = 17/127 (13%)
Frame = +1
Query: 187 HPNPAMRAPPNHDYRDTLMKQKVLHKQ-------------FNSPINLYSEQNIANSI--R 321
HPN + PP Y+ M+ +++ Q SP + S Q AN++ R
Sbjct: 2131 HPNSQAQQPPGQHYQAKQMQPRLMSPQAPPPMSPQQGGLPSQSPRPVMSPQPHANTLSPR 2190
Query: 322 QQT-SPLPPRPA-AQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTP 495
QQT SP P+ + PA+S + L D + P++ ++ P + P+ +
Sbjct: 2191 QQTMSPAHPQQSLTSPRPAQSPHQSHMDPSNLGDKPNLFTQPLSARMTLTPLA-APSESD 2249
Query: 496 KPTKQSD 516
Q D
Sbjct: 2250 MSLGQED 2256
>SB_57625| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1751
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 298 QNIANSIRQQTSPLPPRPAAQYDP 369
QN+ S+ T P PPR Q+DP
Sbjct: 1032 QNLLLSVTGPTCPTPPRVTLQWDP 1055
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +1
Query: 265 QFNSPINLYSEQNIANSIRQQTSPLPP 345
Q P+ QN+AN RQ++ P PP
Sbjct: 15 QLAFPVIFPPRQNVANQTRQRSPPAPP 41
>SB_40658| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/38 (28%), Positives = 20/38 (52%)
Frame = +1
Query: 301 NIANSIRQQTSPLPPRPAAQYDPAKSETYRALQEDGLP 414
N+ N + ++ SP+ + A DPA++ T+ L P
Sbjct: 27 NLVNYVGRRNSPIQEKGAKSSDPARTRTWNLLIRSQAP 64
>SB_31266| Best HMM Match : PKI (HMM E-Value=1)
Length = 1507
Score = 27.5 bits (58), Expect = 6.9
Identities = 24/81 (29%), Positives = 34/81 (41%)
Frame = +3
Query: 6 VHTYKCNNVAQPQLLPERIPGS*TS*RRSCQQLAVPHHSSRAPGS*GPKGAWPHRELPAS 185
++T++ N + +P R P T+ + S P S GP P R+ P S
Sbjct: 385 LNTFRNNIRNRKDSMPPRPPKPSTNGQASVDGQLKPPSSPSPRRQTGPPSPKPSRQPPPS 444
Query: 186 SPQPSNEGTS*PRLP*YPYET 248
SPQ T R P + YET
Sbjct: 445 SPQ-RIAPTPGHRRPVFMYET 464
>SB_11299| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3762
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 52 PNGYQDPKH-PEEEVVSNWPYRTTPLVLPGAKVRREPGP 165
P+ + P+H P+ E + Y++TP+ P K R P P
Sbjct: 432 PDSHALPQHTPQGEDLGQAAYQSTPISKPSVKSRLGPRP 470
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/56 (28%), Positives = 19/56 (33%)
Frame = +1
Query: 334 PLPPRPAAQYDPAKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKP 501
P PP P P A +P A S +AT P + P TP P
Sbjct: 204 PTPPMPETPLPPGSPHIPPAPLHPHIPPAPPNPSKAIATPNPPMPETPLPPATPNP 259
>SB_32416| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0021)
Length = 358
Score = 27.1 bits (57), Expect = 9.2
Identities = 27/114 (23%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Frame = +1
Query: 169 ESYLRHHPNPAMRAPPNHDYRDTLM-KQKVLHKQFNSPINLYSEQNIANSIRQQTSPLPP 345
+ Y H P A R P + T + H+Q + N ++++++ Q P+
Sbjct: 17 QPYDSHGPTSANRGCPYLQNQSTREHRHHPHHRQIHHVPNPSYCPSMSSTVPLQHPPVNA 76
Query: 346 RPAAQYDPAKSETY-RALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKPT 504
P DP + ++ RA+ LP+ S P+AT + P S PT
Sbjct: 77 TPVI-IDPDQLPSHVRAVPITSLPNRLIVNSVPMATPTYVQPPSNEADLPLDPT 129
>SB_4754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 850
Score = 27.1 bits (57), Expect = 9.2
Identities = 20/81 (24%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Frame = +1
Query: 52 PNGYQDPKHPEEEVVSNWPYRTTP---LVLPGAKVRREPGPTESYLRHHPNPAMRAPPNH 222
P Y+ P P + P+ TP + + + R T + HH P M+ PP
Sbjct: 281 PPAYRRPPRPPK-----LPFGCTPENNVKMRAWLLERYASSTFNTCPHHALPCMKGPPVE 335
Query: 223 DYRDTLMKQKVLHKQFNSPIN 285
+ D K H N P++
Sbjct: 336 IHVDPTATPKACHTPANIPLH 356
>SB_48142| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 162 PHRELPASSPQPSNEGTS 215
PH+ P PQP NEG S
Sbjct: 268 PHQPAPGIPPQPMNEGNS 285
>SB_47680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2749
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 208 APPNHDYRDTLMKQKVLHKQFNSPINLYSEQNI 306
+PP HD++DT+ ++ + +S L ++NI
Sbjct: 796 SPPKHDFQDTISSRRTDFLETDSQSRLDGKENI 828
>SB_45877| Best HMM Match : Borrelia_orfA (HMM E-Value=0.23)
Length = 734
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +1
Query: 370 AKSETYRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPKP 501
AK+ET ++ L D+ E S P + T P +P P P
Sbjct: 292 AKNETKTHTEDAKLDDSELESSTPEDGRPKTVPVKPTQSPVPTP 335
>SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 27.1 bits (57), Expect = 9.2
Identities = 25/98 (25%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
Frame = +1
Query: 211 PPNHDYRDTLMKQKVLHKQFNSPI-NLYSEQNIANSIRQQT-SPLPPRPAAQYDPAKSET 384
PP ++ ++ K + +F SP +L S + +Q+ SP P + P+ E
Sbjct: 949 PPTFNF--SVPKPNLPSYKFGSPARDLPSTAYKFGTPKQELHSPTPTHSTPKQKPSSMEF 1006
Query: 385 YRALQEDGLPDAATELSAPVATKVFTAPTSKRPAPTPK 498
QED P + + APV P++K PK
Sbjct: 1007 QFGTQEDNPPSSTFKFRAPVC----EVPSAKTKLQAPK 1040
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.310 0.128 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,070,972
Number of Sequences: 59808
Number of extensions: 320023
Number of successful extensions: 1053
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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