Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30183
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 37 0.011
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 32 0.24
06_03_1175 + 28168007-28170058 31 0.73
06_03_0092 + 16546204-16546693,16546958-16547028,16547145-165472... 30 0.96
09_05_0005 + 20026190-20026343,20026483-20026682,20026918-200273... 30 1.3
01_01_0472 - 3473096-3474288,3474833-3474938 30 1.3
05_01_0580 + 5210002-5210170,5210466-5210524,5210883-5211668,521... 29 2.2
03_04_0140 + 17638335-17638583,17638843-17639061,17639206-176394... 29 2.2
03_06_0225 - 32487592-32487710,32487860-32488325,32489124-324892... 28 3.9
02_02_0558 + 11477433-11477525,11477632-11477973,11481854-114823... 28 3.9
03_03_0022 - 13834090-13834128,13835217-13835282,13835364-138354... 28 5.1
02_04_0220 - 21014225-21014386,21014492-21014572,21014739-210149... 28 5.1
02_03_0273 + 17173983-17174339,17174423-17174575,17174638-171747... 28 5.1
01_05_0147 + 18597194-18597643,18598347-18598681,18600073-186001... 28 5.1
07_03_1080 + 23815232-23817040 27 6.8
05_03_0113 + 8526595-8527440,8527662-8528357 27 8.9
02_05_0288 - 27549718-27549940,27550025-27550102,27550282-275506... 27 8.9
01_06_1089 - 34451982-34452670,34452755-34452814,34453287-344533... 27 8.9
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 36.7 bits (81), Expect = 0.011
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +3
Query: 351 AKINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIKSRL 506
A ++ VE S+ Q EV L++DL+K ELQ R ++E ++ E+++ +
Sbjct: 1052 AALSMVENLHSKSQEEVGKLVMDLDKLENELSELQGRNSRMEELSYELQNTI 1103
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +3
Query: 363 NVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIKSRL 506
++EKQ ++ Q E+ L +D+E AN + LE E+K +
Sbjct: 565 SLEKQYAQSQKEINRLTLDMEMANDRLNDFNLVRLNLENTVCELKKEV 612
>12_01_0906 +
8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/56 (33%), Positives = 24/56 (42%)
Frame = +2
Query: 341 DPHRENQQR*KTEVSSAERGRSPHHRLGEGKRYCSGASEEDRAAGARQHRDQVPSR 508
D HR +R S++ GRS HR E R DR G R+ R + P R
Sbjct: 132 DRHRRRHRRRSPSSESSDGGRSRRHRRDESSRRQRDERRRDR--GGREERRRSPDR 185
>06_03_1175 + 28168007-28170058
Length = 683
Score = 30.7 bits (66), Expect = 0.73
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = -1
Query: 189 DELRTPLPVGRERIP--NRSQPGAGWPQAESAFSPHPQACG--VSLRVDW 52
D TPLP IP NR+ G W + + P+P CG L V+W
Sbjct: 470 DARATPLPPEALLIPFDNRTAKGRAWAKIKHRRVPNPMPCGDNCGLSVNW 519
>06_03_0092 + 16546204-16546693,16546958-16547028,16547145-16547221,
16547322-16547469,16550080-16550148,16550348-16550509,
16550625-16550785,16551240-16551324,16552068-16552144,
16552234-16552441,16555844-16555921,16556463-16556591,
16556665-16556808,16556893-16557038,16557137-16557293,
16557391-16557449,16557582-16557741,16557849-16557998,
16558093-16558229,16558325-16558471,16558556-16558657,
16558742-16558799,16558895-16558996,16559729-16559766,
16559868-16559994,16560075-16560245,16560334-16560465,
16560577-16560686,16560866-16560926,16561031-16561208,
16561293-16561498,16561590-16561709,16561903-16562001,
16562152-16562370,16562701-16562840,16563175-16563286,
16563375-16563425,16563509-16563589,16563683-16563853,
16563934-16564089,16564174-16564380,16565145-16565215,
16565315-16565414,16565783-16565839,16566156-16566212,
16566308-16566388,16566467-16566606,16566641-16566764
Length = 2041
Score = 30.3 bits (65), Expect = 0.96
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +3
Query: 357 INNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIKSRLEET 515
+ + EK S L +EVE L L+ A +L+K+ + ++ N E + ++EET
Sbjct: 1509 VQDTEKVDS-LTAEVEELKTSLQSEKQRADDLEKKRSEEQQANEEKQKKMEET 1560
>09_05_0005 +
20026190-20026343,20026483-20026682,20026918-20027309,
20027646-20027778,20027858-20027942,20028216-20028235
Length = 327
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +3
Query: 378 KSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIKSRLEET 515
K L+S+V VL I++EK + Q+ +L N E+K +++ET
Sbjct: 268 KLELESKVLVLKIEIEKLSEKLATAQRTFNELLAQNNELKIKIQET 313
>01_01_0472 - 3473096-3474288,3474833-3474938
Length = 432
Score = 29.9 bits (64), Expect = 1.3
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Frame = +3
Query: 129 QVEIDLESVRVQLEEESEARLDLE---RQLVKANGEIGHWRSKFXXXXXXXXXXXXXXXX 299
+++ +ES+R++LEE SE +L +E +QL +AN E K+
Sbjct: 327 ELQETIESIRIKLEEVSEEKLLVENKFKQLEEANSE----AEKYNQELSHATEKLSEEKF 382
Query: 300 KYSXXXXXXXXXXXTLIAKINNVEKQKSRLQS 395
++ L +K+ ++ K+KS L+S
Sbjct: 383 RHEAEILALNQAIENLKSKLESIAKEKSLLKS 414
>05_01_0580 +
5210002-5210170,5210466-5210524,5210883-5211668,
5211898-5212737
Length = 617
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 378 KSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIKSRLEET 515
+ + +EVE + LE+ AREL+ +L++ N + RLE T
Sbjct: 280 EGKFSAEVEEKLSKLEELENEARELRVVNSRLQQENAHLARRLELT 325
>03_04_0140 +
17638335-17638583,17638843-17639061,17639206-17639443,
17640614-17640809,17640888-17640942,17641495-17641645,
17642501-17642809,17642950-17643215,17643311-17644237,
17644386-17644712
Length = 978
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/53 (24%), Positives = 29/53 (54%)
Frame = +3
Query: 354 KINNVEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIKSRLEE 512
+++ +E + S L+ + + L E+ ++Q E+++RVN+EI+ E
Sbjct: 523 RLSRIEAELSLLKEKQKDLTEQWEREKSVMTKIQSIKEEIDRVNVEIQQAERE 575
>03_06_0225 -
32487592-32487710,32487860-32488325,32489124-32489237,
32489375-32489602,32489773-32490009,32490490-32490594
Length = 422
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +2
Query: 149 IRSRPTGRGVRSSSGPRTSAG 211
I SRP+G G RSSS P+ G
Sbjct: 348 ISSRPSGLGTRSSSNPKERTG 368
>02_02_0558 +
11477433-11477525,11477632-11477973,11481854-11482381,
11482459-11482956
Length = 486
Score = 28.3 bits (60), Expect = 3.9
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = +2
Query: 320 GTGGANRDPHRENQQR*KTEVSSAERGRSPHHRLGEGKRYCSGASEEDRAAGARQH 487
G GG + R+ QQR + + R RSP R +G S EEDRA G R+H
Sbjct: 255 GDGGKVGEHARQQQQR---QRGNDVRSRSPF-RSWDGS---SRTPEEDRAEGVRRH 303
>03_03_0022 -
13834090-13834128,13835217-13835282,13835364-13835461,
13836340-13836493,13836742-13836798,13836906-13837028
Length = 178
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 362 QR*KTEVSSAERGRSPHHRLGEGKRYCSGASEEDRAAGARQHRD 493
+R E+ A S H + + + A + D AAGARQ +D
Sbjct: 9 RRWAVELHDASSSSSSHSSIPDPPGFTRSAPDADDAAGARQRKD 52
>02_04_0220 -
21014225-21014386,21014492-21014572,21014739-21014938,
21014999-21015157,21015248-21015377,21015520-21015673,
21015785-21015867,21015981-21016040,21016131-21016217
Length = 371
Score = 27.9 bits (59), Expect = 5.1
Identities = 14/52 (26%), Positives = 26/52 (50%)
Frame = +1
Query: 151 PFASNWKRSPKLVWTSNVSWSRLTVRSDTGAPSLRQRLLPGLRKSRKSVAST 306
PF + W R+ +W S ++ ++ +++ GA L Q R+S K +T
Sbjct: 203 PFLAEWVRNKGHLWRSQITAAKEDKKNNAGALQLLQLQEEACRQSGKDGLAT 254
>02_03_0273 +
17173983-17174339,17174423-17174575,17174638-17174700,
17174943-17175026,17175120-17175242,17175466-17175519,
17175669-17175764,17176163-17176258,17177179-17177324,
17178503-17178632,17178697-17179272,17179364-17179462,
17179535-17179687,17179794-17180558,17181384-17181683
Length = 1064
Score = 27.9 bits (59), Expect = 5.1
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +3
Query: 366 VEKQKSRLQSEVEVLIIDLEKANGTARELQKRTEQLERVNIEIKSRLE 509
V+ +SR + E L ++LEK+ + LQ E ++ + E+K LE
Sbjct: 804 VDAAESRWITLTEELRVELEKSKSLSERLQLEVESEKQCSEELKGALE 851
>01_05_0147 +
18597194-18597643,18598347-18598681,18600073-18600147,
18600325-18600427,18601554-18601642,18602953-18603064,
18604093-18604146,18604271-18604319,18606236-18606347,
18606389-18606436,18607000-18607327
Length = 584
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 308 HPHPGTGGANRDPHRENQQR*KTEVSSAERGRSPHHRLGEGKRYC-SGASEEDRAAGARQ 484
H H +G + R ++++R + ERGR R G+ SG+ E DRA AR+
Sbjct: 77 HHHKSSGRSRRSRDDDDERRRRRRRRDEERGR----RGGDASESSGSGSEEPDRAEEARE 132
>07_03_1080 + 23815232-23817040
Length = 602
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 392 ERGRSPHHRLGEGKRYCSGASEEDRAAGARQHRDQVPS 505
E G +PHH+L + + S +S GAR + Q P+
Sbjct: 87 ECGNAPHHQLYMDEDFSSSSSSRHFHHGARVQQQQPPA 124
>05_03_0113 + 8526595-8527440,8527662-8528357
Length = 513
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Frame = +2
Query: 326 GGANRDPHRENQQR*KTEVSSAERGRSPHHRLG-----EGKRYCSGASEEDRAAGARQHR 490
GG + D ++N++ + E E GRSP EGK +G SEE + G +
Sbjct: 382 GGGDGDGSKDNEKDMRDE-EEEEEGRSPKRARNDDMVVEGKEGGNGDSEEAMSNGRGERE 440
Query: 491 DQ 496
D+
Sbjct: 441 DE 442
>02_05_0288 -
27549718-27549940,27550025-27550102,27550282-27550674,
27550752-27551347,27552232-27552978
Length = 678
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/44 (40%), Positives = 21/44 (47%)
Frame = +1
Query: 94 REGALCLRPACTRLRSIWNPFASNWKRSPKLVWTSNVSWSRLTV 225
RE CL PA + R NPF W S + W +NV LTV
Sbjct: 156 RERLRCLVPAPSGYR---NPFP--WPASRDVAWFANVPHKELTV 194
>01_06_1089 -
34451982-34452670,34452755-34452814,34453287-34453352,
34454055-34454253,34454470-34454719,34454830-34454898,
34455733-34455804,34456027-34456168,34456544-34457064,
34457166-34457739,34459164-34459269
Length = 915
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 401 RSPHHRLGEGKRYCSGASEEDRAAGARQHRDQVPS 505
+ PH G G R CS A+ R AG +Q+ D++ S
Sbjct: 592 QKPHRAAGYGVRRCS-AAHVIRRAGRQQYCDRIGS 625
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,329,249
Number of Sequences: 37544
Number of extensions: 219296
Number of successful extensions: 891
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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