Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30178
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 274 2e-74
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 274 2e-74
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 274 2e-74
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 274 2e-74
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 274 2e-74
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 274 2e-74
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 273 4e-74
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 273 4e-74
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 273 4e-74
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 267 3e-72
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 251 3e-67
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 144 4e-35
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 124 3e-29
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 94 6e-20
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 75 2e-14
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 73 1e-13
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 73 1e-13
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 51 6e-07
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 42 2e-04
U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical pr... 29 2.0
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 29 2.6
Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical pr... 27 6.0
AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical... 27 6.0
AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical... 27 6.0
U64604-2|AAF98624.2| 1093|Caenorhabditis elegans Receptor mediat... 27 8.0
AY750054-1|AAW73253.1| 1093|Caenorhabditis elegans receptor-medi... 27 8.0
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 274 bits (672), Expect = 2e-74
Identities = 129/137 (94%), Positives = 135/137 (98%)
Frame = +2
Query: 104 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITI 283
KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITV 251
Query: 284 GNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIA 463
GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIA
Sbjct: 252 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIA 311
Query: 464 DRMQKEITALAPSTIKI 514
DRMQKEITALAPST+KI
Sbjct: 312 DRMQKEITALAPSTMKI 328
Score = 74.5 bits (175), Expect = 4e-14
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +1
Query: 4 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 105
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 274 bits (672), Expect = 2e-74
Identities = 129/137 (94%), Positives = 135/137 (98%)
Frame = +2
Query: 104 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITI 283
KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITV 251
Query: 284 GNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIA 463
GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIA
Sbjct: 252 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIA 311
Query: 464 DRMQKEITALAPSTIKI 514
DRMQKEITALAPST+KI
Sbjct: 312 DRMQKEITALAPSTMKI 328
Score = 74.5 bits (175), Expect = 4e-14
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +1
Query: 4 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 105
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 274 bits (672), Expect = 2e-74
Identities = 129/137 (94%), Positives = 135/137 (98%)
Frame = +2
Query: 104 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITI 283
KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITV 251
Query: 284 GNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIA 463
GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIA
Sbjct: 252 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIA 311
Query: 464 DRMQKEITALAPSTIKI 514
DRMQKEITALAPST+KI
Sbjct: 312 DRMQKEITALAPSTMKI 328
Score = 74.5 bits (175), Expect = 4e-14
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +1
Query: 4 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 105
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 274 bits (672), Expect = 2e-74
Identities = 129/137 (94%), Positives = 135/137 (98%)
Frame = +2
Query: 104 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITI 283
KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+
Sbjct: 148 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITV 207
Query: 284 GNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIA 463
GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIA
Sbjct: 208 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIA 267
Query: 464 DRMQKEITALAPSTIKI 514
DRMQKEITALAPST+KI
Sbjct: 268 DRMQKEITALAPSTMKI 284
Score = 74.5 bits (175), Expect = 4e-14
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +1
Query: 4 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 105
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 115 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 148
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 274 bits (672), Expect = 2e-74
Identities = 129/137 (94%), Positives = 135/137 (98%)
Frame = +2
Query: 104 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITI 283
KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+
Sbjct: 178 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITV 237
Query: 284 GNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIA 463
GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIA
Sbjct: 238 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIA 297
Query: 464 DRMQKEITALAPSTIKI 514
DRMQKEITALAPST+KI
Sbjct: 298 DRMQKEITALAPSTMKI 314
Score = 74.5 bits (175), Expect = 4e-14
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +1
Query: 4 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 105
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 145 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 178
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 274 bits (672), Expect = 2e-74
Identities = 129/137 (94%), Positives = 135/137 (98%)
Frame = +2
Query: 104 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITI 283
KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITV 251
Query: 284 GNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIA 463
GNERFRCPEALFQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIA
Sbjct: 252 GNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIA 311
Query: 464 DRMQKEITALAPSTIKI 514
DRMQKEITALAPST+KI
Sbjct: 312 DRMQKEITALAPSTMKI 328
Score = 74.5 bits (175), Expect = 4e-14
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +1
Query: 4 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 105
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 273 bits (670), Expect = 4e-74
Identities = 128/137 (93%), Positives = 135/137 (98%)
Frame = +2
Query: 104 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITI 283
KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITV 251
Query: 284 GNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIA 463
GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIA
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIA 311
Query: 464 DRMQKEITALAPSTIKI 514
DRMQKEITALAPST+KI
Sbjct: 312 DRMQKEITALAPSTMKI 328
Score = 74.5 bits (175), Expect = 4e-14
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +1
Query: 4 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 105
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 273 bits (670), Expect = 4e-74
Identities = 128/137 (93%), Positives = 135/137 (98%)
Frame = +2
Query: 104 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITI 283
KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITV 251
Query: 284 GNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIA 463
GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIA
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIA 311
Query: 464 DRMQKEITALAPSTIKI 514
DRMQKEITALAPST+KI
Sbjct: 312 DRMQKEITALAPSTMKI 328
Score = 74.5 bits (175), Expect = 4e-14
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +1
Query: 4 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 105
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 273 bits (670), Expect = 4e-74
Identities = 128/137 (93%), Positives = 135/137 (98%)
Frame = +2
Query: 104 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITI 283
KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITV 251
Query: 284 GNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIA 463
GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIA
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIA 311
Query: 464 DRMQKEITALAPSTIKI 514
DRMQKEITALAPST+KI
Sbjct: 312 DRMQKEITALAPSTMKI 328
Score = 74.5 bits (175), Expect = 4e-14
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +1
Query: 4 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 105
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 267 bits (655), Expect = 3e-72
Identities = 127/137 (92%), Positives = 134/137 (97%)
Frame = +2
Query: 104 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITI 283
KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAA+S+SLEKSYELPDGQVIT+
Sbjct: 192 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITV 251
Query: 284 GNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIA 463
GNERFRCPEA+FQPSFLGMES GIHET YNSIMKCD+DIRKDLYANTV+SGGTTMYPGIA
Sbjct: 252 GNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTTMYPGIA 311
Query: 464 DRMQKEITALAPSTIKI 514
DRMQKEITALAP T+KI
Sbjct: 312 DRMQKEITALAP-TMKI 327
Score = 74.5 bits (175), Expect = 4e-14
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +1
Query: 4 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 105
GV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMK
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 192
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 251 bits (614), Expect = 3e-67
Identities = 117/137 (85%), Positives = 127/137 (92%)
Frame = +2
Query: 104 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITI 283
KILTERGY+FTTTAEREIVRDIKEKLCYVA DFE E+A AA+S+SLEKSYELPDGQVITI
Sbjct: 191 KILTERGYTFTTTAEREIVRDIKEKLCYVAHDFESELAAAASSSSLEKSYELPDGQVITI 250
Query: 284 GNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIA 463
GNERFRCPE LFQP+F+GME GIHET Y SIMKCDVDIRKDLYANTV+SGGT+M+PGIA
Sbjct: 251 GNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLSGGTSMFPGIA 310
Query: 464 DRMQKEITALAPSTIKI 514
DRMQKEI LAPST+KI
Sbjct: 311 DRMQKEIQHLAPSTMKI 327
Score = 71.3 bits (167), Expect = 4e-13
Identities = 31/34 (91%), Positives = 33/34 (97%)
Frame = +1
Query: 4 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMK 105
GV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MK
Sbjct: 158 GVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMK 191
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 144 bits (348), Expect = 4e-35
Identities = 64/130 (49%), Positives = 87/130 (66%)
Frame = +2
Query: 104 KILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITI 283
K+L +RGY+F +A+ E VR +KEKLCY+A D EQE A +T L + Y LPDG+VI +
Sbjct: 195 KLLLQRGYNFNHSADFETVRQMKEKLCYIAYDVEQEERLALETTVLSQQYTLPDGRVIRL 254
Query: 284 GNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIA 463
G ERF PE LFQP + +E G+ E ++ I D+D R D Y + V+SGGTTMYPG+
Sbjct: 255 GGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSGGTTMYPGLP 314
Query: 464 DRMQKEITAL 493
R++KE+ L
Sbjct: 315 SRLEKELKQL 324
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/45 (51%), Positives = 31/45 (68%)
Frame = +1
Query: 4 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKDPHREGLLVHH 138
GV+H P+YEG+AL H RLD+AGRD+T YL+K + G +H
Sbjct: 162 GVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNH 206
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 124 bits (300), Expect = 3e-29
Identities = 63/136 (46%), Positives = 84/136 (61%)
Frame = +2
Query: 107 ILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIG 286
+L GY F + E EIVR++KE CY+ALD T + S++ SY LPD I I
Sbjct: 196 LLRREGYEFHRSNEFEIVREMKENACYLALD-----PTKVENNSVKSSYALPDTTKIEIS 250
Query: 287 NERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIAD 466
N FR PE LF+P +G E G+ V SIMKCDVD+R+ LY+N V+SGGTT++ G D
Sbjct: 251 NSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSGGTTLFKGFGD 310
Query: 467 RMQKEITALAPSTIKI 514
R+ E+ +AP+ KI
Sbjct: 311 RLLGEMRKIAPADGKI 326
Score = 55.6 bits (128), Expect = 2e-08
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +1
Query: 4 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKDPHREGLLVH 135
GV+H VPI +G+A+ HAI R+DLAGRD+T+YL REG H
Sbjct: 162 GVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFH 205
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 93.9 bits (223), Expect = 6e-20
Identities = 44/131 (33%), Positives = 80/131 (61%), Gaps = 3/131 (2%)
Frame = +2
Query: 125 YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAAST--SLEKSYELPDGQV-ITIGNER 295
Y+F + E+ I+R E+ YV D+++E + T SL+ P Q I N R
Sbjct: 373 YAFQSPVEKLILRFALEQTTYVPEDYQKEEKSENKETRISLDAFTPSPGMQTRFDIDNSR 432
Query: 296 FRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQ 475
F C E LF+P G+++ G+H+ ++ +I++C +D R+ LY N ++GG ++ PGIA++++
Sbjct: 433 FLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGIAEKLE 492
Query: 476 KEITALAPSTI 508
+E++ + P+TI
Sbjct: 493 QELSTVVPNTI 503
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 75.4 bits (177), Expect = 2e-14
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 9/145 (6%)
Frame = +2
Query: 107 ILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDG-QVIT- 280
+L +R ++ E+ + IKEK CYV D +E T K DG IT
Sbjct: 214 LLRDREHTIPAEQSYEVAKMIKEKFCYVCPDVMKEFVKY--DTDAAKWLRTYDGINSITK 271
Query: 281 ------IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 439
+G ERF PE F P F E + I +T+ I +C +D+R+ LY N V+SGG
Sbjct: 272 KPFNVDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGG 331
Query: 440 TTMYPGIADRMQKEITALAPSTIKI 514
+TM+ A ++Q+++ L+ +++
Sbjct: 332 STMFKDFARKLQRDVKRLSDGRLQM 356
Score = 35.5 bits (78), Expect = 0.023
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 4 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYL 99
GV+H +P+ +GY + I + +AGRD+T ++
Sbjct: 180 GVTHCIPVADGYVIGSCIKHIPIAGRDITYFI 211
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 72.9 bits (171), Expect = 1e-13
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 22/141 (15%)
Frame = +2
Query: 146 EREIVRDIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD------GQV-------- 274
E ++ + KE LC+V+ +F++ M A + K Y +PD G V
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQENTTMKRYIMPDFHSTFRGVVKDVKEPHD 257
Query: 275 -----ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 439
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317
Query: 440 TTMYPGIADRMQKEITALAPS 502
++ +PG +R+++E+ ++ P+
Sbjct: 318 SSCFPGFRERLEREVRSMLPA 338
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 72.9 bits (171), Expect = 1e-13
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 22/141 (15%)
Frame = +2
Query: 146 EREIVRDIKEKLCYVALDFEQEMATAA---ASTSLEKSYELPD------GQV-------- 274
E ++ + KE LC+V+ +F++ M A + K Y +PD G V
Sbjct: 198 ETYVINECKEDLCFVSQNFDESMKEARNRFQGNTTMKRYIMPDFHSTFRGVVKDVKEPHD 257
Query: 275 -----ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANTVMSGG 439
I +G ERF PE LF PS + ++ CG+ E V SI +C +R L N ++ GG
Sbjct: 258 PQIPSIHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGG 317
Query: 440 TTMYPGIADRMQKEITALAPS 502
++ +PG +R+++E+ ++ P+
Sbjct: 318 SSCFPGFRERLEREVRSMLPA 338
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 50.8 bits (116), Expect = 6e-07
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Frame = +2
Query: 251 YELPDGQVITIGNERFRCPEALFQPSFLGMES-----CGIHETVYNSIMKCDVDIRKDLY 415
Y P+G G ER + PE LF +L E + + S D+DIR L+
Sbjct: 293 YAFPNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLF 352
Query: 416 ANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 514
+N ++GG ++ G +R+ + P TIK+
Sbjct: 353 SNVTVTGGNSLILGFTERLNYALATKCPPTIKL 385
Score = 34.7 bits (76), Expect = 0.040
Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Frame = +1
Query: 19 VPIYEGYALPHAILRLDLAGRDLTDYLMKDPHREGL-LVHHHR*EGNRS*HQGEALLCRP 195
VP+++GYA+ HA+++ + G +T+ L + ++ + ++ +R G ++GEA P
Sbjct: 186 VPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQKIDVIPTYRIGGKEEVNEGEAPKWTP 245
Query: 196 R 198
R
Sbjct: 246 R 246
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 42.3 bits (95), Expect = 2e-04
Identities = 14/43 (32%), Positives = 29/43 (67%)
Frame = +2
Query: 365 VYNSIMKCDVDIRKDLYANTVMSGGTTMYPGIADRMQKEITAL 493
++ + KC +D+RK L+ N +++GG + PG+ R+++EI +
Sbjct: 194 LHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVI 236
>U39652-2|AAA80404.1| 817|Caenorhabditis elegans Hypothetical
protein R07E4.5 protein.
Length = 817
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/48 (33%), Positives = 18/48 (37%)
Frame = +1
Query: 352 HPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHVPRYRRQDAEGDHRPR 495
HP + HH+ H PV HR R H Q A RPR
Sbjct: 769 HPHHQQMPHHQPHLHHAHHPVHPHRGPRASHSQHLQHGQYAHHTQRPR 816
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = +3
Query: 30 RRLRSAPRHPPSGLGWSRLDRLPHERSSPRGVTRSPPP 143
RR RS R PPS R D P R + R +RSPPP
Sbjct: 135 RRSRSRTRSPPSR---DRRDS-PDRRDNSRSRSRSPPP 168
>Z82268-9|CAD89738.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +3
Query: 33 RLRSAPRHPPSGLGWSRLDRLPHERSSPRGVTRSPPPLRGKS 158
R S PR S +R R + PR V RSPPP R S
Sbjct: 232 RRASPPRRTSSPKRDARPAREIRDSREPREVRRSPPPRRAAS 273
>Z82268-8|CAB05201.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +3
Query: 33 RLRSAPRHPPSGLGWSRLDRLPHERSSPRGVTRSPPPLRGKS 158
R S PR S +R R + PR V RSPPP R S
Sbjct: 232 RRASPPRRTSSPKRDARPAREIRDSREPREVRRSPPPRRAAS 273
>AL023835-17|CAD89760.1| 509|Caenorhabditis elegans Hypothetical
protein Y37A1B.1b protein.
Length = 509
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +3
Query: 33 RLRSAPRHPPSGLGWSRLDRLPHERSSPRGVTRSPPPLRGKS 158
R S PR S +R R + PR V RSPPP R S
Sbjct: 232 RRASPPRRTSSPKRDARPAREIRDSREPREVRRSPPPRRAAS 273
>AL023835-16|CAA19496.1| 1222|Caenorhabditis elegans Hypothetical
protein Y37A1B.1a protein.
Length = 1222
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = +3
Query: 33 RLRSAPRHPPSGLGWSRLDRLPHERSSPRGVTRSPPPLRGKS 158
R S PR S +R R + PR V RSPPP R S
Sbjct: 232 RRASPPRRTSSPKRDARPAREIRDSREPREVRRSPPPRRAAS 273
>U64604-2|AAF98624.2| 1093|Caenorhabditis elegans Receptor mediated
endocytosis protein6, isoform a protein.
Length = 1093
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 18 RTHLRRLRSAPRHPPSGLGWSRLDR-LPHERSSPR 119
R HLRR S + PPSG+ S ++ LP + PR
Sbjct: 638 REHLRRSGSFVKPPPSGIPTSSSEQNLPDVATGPR 672
>AY750054-1|AAW73253.1| 1093|Caenorhabditis elegans
receptor-mediated endocytosis 6 protein.
Length = 1093
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 18 RTHLRRLRSAPRHPPSGLGWSRLDR-LPHERSSPR 119
R HLRR S + PPSG+ S ++ LP + PR
Sbjct: 638 REHLRRSGSFVKPPPSGIPTSSSEQNLPDVATGPR 672
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/82 (24%), Positives = 25/82 (30%)
Frame = +1
Query: 271 GDHHR*REVPLSRGSLPAFLPGYGIVRHPRDRVQLHHEVRRRHP*GPVRQHRHVRWYHHV 450
G+HH P G +G H HHE P H H +HH
Sbjct: 407 GEHHGTHHSPAHHGEHGTHHGHHG-EHHHAPAHHGHHESHGHGHHSPAH-HGHHGEHHHA 464
Query: 451 PRYRRQDAEGDHRPRALDHQDQ 516
P + E H P H +
Sbjct: 465 PAHHGHHGEHHHAPAHHGHHGE 486
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,221,484
Number of Sequences: 27780
Number of extensions: 238434
Number of successful extensions: 800
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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