Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30178
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             207   6e-56
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          22   3.3  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   3.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   4.3  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   4.3  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   5.7  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.5  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   10.0 
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   10.0 
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   10.0 
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   10.0 
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   10.0 
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   10.0 

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  207 bits (505), Expect = 6e-56
 Identities = 96/102 (94%), Positives = 101/102 (99%)
 Frame = +2

Query: 209 EMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKC 388
           EMATAA+S+SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME+CGIHET YNSIMKC
Sbjct: 1   EMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKC 60

Query: 389 DVDIRKDLYANTVMSGGTTMYPGIADRMQKEITALAPSTIKI 514
           DVDIRKDLYANTV+SGGTTMYPGIADRMQKEITALAPST+KI
Sbjct: 61  DVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKI 102


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = -1

Query: 402 RMSTSHFMMELYT--VSWMPHDSIPRKEGWKR 313
           R     F+  L T    W+ +++I RK  W R
Sbjct: 18  RSENDPFLKRLITGDEKWVVYNNIKRKRSWSR 49


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 84  LDRLPHERSSPRGVTRSPPP 143
           L++  H  SS +G+T   PP
Sbjct: 595 LEKREHRSSSTKGITIQEPP 614


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 2/32 (6%)
 Frame = -1

Query: 402 RMSTSHFMMELYT--VSWMPHDSIPRKEGWKR 313
           R     F+  L T    W+ +++I RK  W R
Sbjct: 139 RNENDPFLKRLITGDEKWVVYNNIKRKRSWSR 170


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +1

Query: 370 QLHHEVRRRHP*GPVRQHRH 429
           Q+HH++  +HP    +Q +H
Sbjct: 167 QMHHQMHTQHPHMQPQQGQH 186


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 370 QLHHEVRRRHP*GPVRQHR 426
           QL+ +V+  H   PV+QHR
Sbjct: 266 QLNSDVQPGHGSPPVKQHR 284


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -3

Query: 385 LHDGVVHGLVDAARFHTQEG 326
           +H G +H  V   ++ TQ+G
Sbjct: 907 VHQGQIHLTVAVVQYKTQDG 926


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 6   CLPHRTHLRRLRSAPRHPPS 65
           C P   +L ++ S P HPP+
Sbjct: 79  CDPVPGNLEQIGSRPLHPPA 98


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 203 RSRGRHSRASP*CHERFPSQR 141
           RSR R  + +  CH R+   R
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSR 238


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 203 RSRGRHSRASP*CHERFPSQR 141
           RSR R  + +  CH R+   R
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSR 238


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 203 RSRGRHSRASP*CHERFPSQR 141
           RSR R  + +  CH R+   R
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSR 238


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 203 RSRGRHSRASP*CHERFPSQR 141
           RSR R  + +  CH R+   R
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSR 238


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 203 RSRGRHSRASP*CHERFPSQR 141
           RSR R  + +  CH R+   R
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSR 238


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 10.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 203 RSRGRHSRASP*CHERFPSQR 141
           RSR R  + +  CH R+   R
Sbjct: 218 RSRSRSFQRTSSCHSRYEDSR 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,012
Number of Sequences: 438
Number of extensions: 3203
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)