Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30173
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0832 + 25190755-25190960,25191869-25191997,25192079-251923...    28   3.9  
06_03_0825 - 25109742-25110473,25110546-25110833,25110930-251109...    28   3.9  
05_05_0179 + 23022985-23023190,23024099-23024227,23024309-230245...    28   3.9  
04_01_0183 + 2079879-2080084,2080994-2081122,2081204-2081426,208...    28   3.9  
03_02_0226 - 6569657-6570388,6570461-6570748,6570846-6571303,657...    28   3.9  
04_04_1462 - 33769122-33769151,33769385-33769426,33769571-337701...    27   6.8  

>06_03_0832 +
           25190755-25190960,25191869-25191997,25192079-25192301,
           25192447-25192702,25193228-25193685,25193783-25194070,
           25194143-25194874
          Length = 763

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 112 KYIRKEITDYLSNFIEKHLILSVFEGKEIAFKKNSNGTLILFSAVPLSR 258
           KYI K  T    + I KHL  S  + KE A  +    TL+  SA+ + R
Sbjct: 533 KYILKRWTKDARDSIPKHLEESYLKDKEAASSRTYRNTLLHKSALDMVR 581


>06_03_0825 -
           25109742-25110473,25110546-25110833,25110930-25110993,
           25111855-25111912,25111913-25112168,25112310-25112532,
           25112614-25112742,25113651-25113856
          Length = 651

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 112 KYIRKEITDYLSNFIEKHLILSVFEGKEIAFKKNSNGTLILFSAVPLSR 258
           KYI K  T    + I KHL  S  + KE A  +    TL+  SA+ + R
Sbjct: 421 KYILKRWTKDARDSIPKHLEESYLKDKEAASSRTYRNTLLHKSALDMVR 469


>05_05_0179 +
           23022985-23023190,23024099-23024227,23024309-23024531,
           23024674-23024929,23025455-23025912,23026009-23026296,
           23026369-23027100
          Length = 763

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 112 KYIRKEITDYLSNFIEKHLILSVFEGKEIAFKKNSNGTLILFSAVPLSR 258
           KYI K  T    + I KHL  S  + KE A  +    TL+  SA+ + R
Sbjct: 533 KYILKRWTKDARDSIPKHLEESYLKDKEAASSRTYRNTLLHKSALDMVR 581


>04_01_0183 +
           2079879-2080084,2080994-2081122,2081204-2081426,
           2081569-2081824,2082358-2082550,2082602-2082815,
           2082912-2083025,2083284-2084000
          Length = 683

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 112 KYIRKEITDYLSNFIEKHLILSVFEGKEIAFKKNSNGTLILFSAVPLSR 258
           KYI K  T    + I KHL  S  + KE A  +    TL+  SA+ + R
Sbjct: 454 KYILKRWTKDARDSIPKHLEESYLKDKEAASSRTYRNTLLHKSALDMVR 502


>03_02_0226 -
           6569657-6570388,6570461-6570748,6570846-6571303,
           6571694-6571828,6571829-6572084,6572229-6572451,
           6572533-6572661,6573570-6573775
          Length = 808

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 112 KYIRKEITDYLSNFIEKHLILSVFEGKEIAFKKNSNGTLILFSAVPLSR 258
           KYI K  T    + I KHL  S  + KE A  +    TL+  SA+ + R
Sbjct: 578 KYILKRWTKDARDSIPKHLEESYLKDKEAASSRTYRNTLLHKSALDMVR 626


>04_04_1462 -
           33769122-33769151,33769385-33769426,33769571-33770158,
           33770398-33770508,33770585-33770625,33771238-33771382,
           33771578-33771781,33772626-33772769,33772991-33773183,
           33774559-33774602,33774694-33774822,33774907-33774954,
           33775058-33775120,33775198-33775236,33776694-33776767,
           33777460-33777518,33777709-33777768,33777920-33778044,
           33778693-33778751,33779418-33779511,33779572-33779625,
           33779775-33779813,33780423-33780602
          Length = 854

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +2

Query: 269 GVVQRNNEHHPVLVFQGYFEIVVSAIQSFFS 361
           G + + +E+ P+ +F G  E +  AI+SFFS
Sbjct: 634 GEISKTSEYDPLDLFSGSKERIHMAIKSFFS 664


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,875,246
Number of Sequences: 37544
Number of extensions: 215363
Number of successful extensions: 443
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)