Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30173
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g35210.2 68418.m04175 peptidase M50 family protein / sterol-r...    29   1.4  
At5g35210.1 68418.m04174 peptidase M50 family protein / sterol-r...    29   1.4  
At1g72850.1 68414.m08426 disease resistance protein (TIR-NBS cla...    29   1.4  
At2g20725.1 68415.m02435 CAAX amino terminal protease family pro...    27   9.9  
At1g42990.1 68414.m04949 bZIP transcription factor family protei...    27   9.9  

>At5g35210.2 68418.m04175 peptidase M50 family protein /
            sterol-regulatory element binding protein (SREBP) site 2
            protease family protein contains PFam PF02163:
            sterol-regulatory element binding protein (SREBP) site 2
            protease
          Length = 1409

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -2

Query: 386  YW*IWKESGKKNSELRLQQFQNNLGIQVPD-DVRCFFERRLSF*RDKGTAENK 231
            +W    ES K  S+L LQ +QN   ++ P+ DV  F   R+    DK  ++NK
Sbjct: 922  FWKAAVESSKNISQLALQAYQNLQNVKGPETDVAIFRNARIC---DKKLSDNK 971


>At5g35210.1 68418.m04174 peptidase M50 family protein /
            sterol-regulatory element binding protein (SREBP) site 2
            protease family protein contains PFam PF02163:
            sterol-regulatory element binding protein (SREBP) site 2
            protease
          Length = 1576

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -2

Query: 386  YW*IWKESGKKNSELRLQQFQNNLGIQVPD-DVRCFFERRLSF*RDKGTAENK 231
            +W    ES K  S+L LQ +QN   ++ P+ DV  F   R+    DK  ++NK
Sbjct: 922  FWKAAVESSKNISQLALQAYQNLQNVKGPETDVAIFRNARIC---DKKLSDNK 971


>At1g72850.1 68414.m08426 disease resistance protein (TIR-NBS
           class), putative domain signature TIR-NBS exists,
           suggestive of a disease resistance protein.
          Length = 422

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 156 YEIAEIVSNFFSYIFLDTSIKICTQGSDV 70
           Y   EI SNF  ++F+D + KIC Q  D+
Sbjct: 211 YAYEEISSNFKVHVFVDKAEKICHQDRDL 239


>At2g20725.1 68415.m02435 CAAX amino terminal protease family
           protein contains Pfam profile PF02517 CAAX amino
           terminal protease family protein
          Length = 301

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
 Frame = +1

Query: 220 GTLILFSA--VPLSRQNERRRSKKQR--TSSGTCIPRLF*NCCKRNS 348
           G  + FS    P++  +ERRR  + R  +S+ TC P L  +C K  S
Sbjct: 4   GRWVSFSCGNTPVTNCSERRRHTEFRRLSSASTCRPSLICSCLKSKS 50


>At1g42990.1 68414.m04949 bZIP transcription factor family protein
           contains Pfam profile: PF00170: bZIP transcription
           factor
          Length = 295

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 10/25 (40%), Positives = 19/25 (76%)
 Frame = -2

Query: 368 ESGKKNSELRLQQFQNNLGIQVPDD 294
           +SGK+NS+L +++  N+ G ++ DD
Sbjct: 106 DSGKENSDLVVEKKSNDSGSEIHDD 130


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,328,104
Number of Sequences: 28952
Number of extensions: 198130
Number of successful extensions: 440
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 440
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)