Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30172
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    26   0.23 
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    25   0.30 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.70 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   2.8  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   3.7  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   4.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.9  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.9  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   4.9  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   4.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.6  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   8.6  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 13/60 (21%), Positives = 26/60 (43%)
 Frame = -2

Query: 254 LPNEISSLSFCILTQNLVSSSSKKFFIIAGQLSRFSIGSQVFSLSDHPFHFT*KYSFPFS 75
           +PN++S           ++  + + F+    + R   G     L+   +H T  +SFPF+
Sbjct: 196 MPNDVSITDEPAYQYRGIALDTSRNFVTVDVIKRTLDGMAASKLNSFHWHITDSHSFPFT 255


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 25.4 bits (53), Expect = 0.30
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 57  FLNNIFFCIFYIVSLFFLN 1
           FLNN +F IF +   F+L+
Sbjct: 293 FLNNFYFIIFQVFESFYLH 311


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = -1

Query: 240 FFFEFLYFNTESSFFFIQKIFYYCRTVI*V-FNRFPSIFTIRPSFPFHMKVFFSIFILEP 64
           F   F+ F T    F +   ++YC  +I +    F   F I   FP H    FS++ L+ 
Sbjct: 268 FCCAFIIF-TMHLLFLLCIYYFYCALIILLCIYYFCRAFII---FPTHFYCAFSLYPLKS 323

Query: 63  *YFLN 49
            ++LN
Sbjct: 324 TFYLN 328



 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 91  ILFHFHT*TLVFSQQYILLHFLYCFSF 11
           ILF  H   LV    +  +H L+C +F
Sbjct: 246 ILFTVHLLLLVCIYYFYYMHLLFCCAF 272


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = +1

Query: 292 EFEDADLSKIKENLQLKFLSILFLTEKEEHCGAT 393
           E +  D  +  ENL  +  S++ LTE EE  G +
Sbjct: 24  EGDGEDEKRSSENLTEEKSSLIDLTESEEKSGGS 57


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -2

Query: 455 CLHLFLTNTYNCRISLVSSTSVAP 384
           CL L +T  ++CR    SS   +P
Sbjct: 66  CLFLEMTLAHHCRFKFSSSVGWSP 89


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
 Frame = +1

Query: 151 NLDNCPAIIKNFLDEEETRFCVKIQKLKE-EISFGNLLEDNNLIERFTE 294
           NL   P+ I + L+ +  +  +K   L   ++S   +LE NNL E FT+
Sbjct: 469 NLSETPSGISSLLNLDNQQLELKPIDLNSGDLS---MLETNNLSETFTQ 514


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = -1

Query: 132 IFTIRPSFPFHMKV 91
           +FT+RP+  +H+++
Sbjct: 958 VFTLRPATTYHIRI 971


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 93   VFFSIFILEP*YFLNNIFFCIFYIVSLF 10
            V+ +   LEP  F+  IFF +  ++  F
Sbjct: 1273 VYITYLQLEPIGFVFLIFFALLMVIQFF 1300


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 93   VFFSIFILEP*YFLNNIFFCIFYIVSLF 10
            V+ +   LEP  F+  IFF +  ++  F
Sbjct: 1273 VYITYLQLEPIGFVFLIFFALLMVIQFF 1300


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 39  FCIFYIVSLFFL 4
           FC+ Y+V L FL
Sbjct: 174 FCVLYVVLLHFL 185


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -1

Query: 39  FCIFYIVSLFFL 4
           FC+ Y+V L FL
Sbjct: 174 FCVLYVVLLHFL 185


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +1

Query: 85   KEYFHVKW 108
            K+Y H+KW
Sbjct: 1290 KDYLHIKW 1297


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +1

Query: 85   KEYFHVKW 108
            K+Y H+KW
Sbjct: 1290 KDYLHIKW 1297


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = -1

Query: 93  VFFSIFILEP*YFLNNIFFCIFYIVSLFF 7
           ++F IFI E     N +FF   ++ +L F
Sbjct: 228 MYFDIFITEHESKPNWLFFLANFLTNLLF 256


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.136    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,684
Number of Sequences: 336
Number of extensions: 2764
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)