Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30172
(516 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 45 8e-06
SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyce... 42 4e-05
SPAC664.01c |swi6|SPAC824.10c|chromodomain protein Swi6|Schizosa... 40 2e-04
SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 31 0.14
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 30 0.18
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 1.7
SPBC211.02c |cwf3|syf1|complexed with Cdc5 protein Cwf3 |Schizos... 27 2.2
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 26 3.8
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 26 3.8
SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase Ubp10|Schizosa... 26 3.8
SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase Rdp1|Schizosa... 26 3.8
SPAC13G7.07 |arb2||argonaute binding protein 2|Schizosaccharomyc... 25 5.1
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 25 6.7
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M... 25 6.7
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 8.9
SPBC1289.02c |uap2||U2 snRNP-associated protein Uap2|Schizosacch... 25 8.9
SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr... 25 8.9
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 25 8.9
SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit |Schiz... 25 8.9
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom... 25 8.9
SPBC887.14c |pfh1|pif1|pif1 helicase homolog Pfh1|Schizosaccharo... 25 8.9
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 8.9
SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|c... 25 8.9
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 44.8 bits (101), Expect = 8e-06
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +1
Query: 37 EEYIVEKILGFKYE-NGK-EYFHVKWKGWSDSENTWEPIENLDNCPAII 177
EEY VE+I+ K + NG + + ++W +S +TWEP ENL C A++
Sbjct: 6 EEYEVERIVDEKLDRNGAVKLYRIRWLNYSSRSDTWEPPENLSGCSAVL 54
>SPAC18G6.02c |chp1||chromodomain protein Chp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 960
Score = 42.3 bits (95), Expect = 4e-05
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1
Query: 34 AEEYIVEKILGFKY-ENGKEYFHVKWKGWSDSENTWEPIENLDNCPAIIKNF 186
A+ Y VE IL + +NG +++KW G+ +NTWEP +NL ++K +
Sbjct: 19 ADVYEVEDILADRVNKNGINEYYIKWAGYDWYDNTWEPEQNLFGAEKVLKKW 70
>SPAC664.01c |swi6|SPAC824.10c|chromodomain protein
Swi6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 39.9 bits (89), Expect = 2e-04
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Frame = +1
Query: 37 EEYIVEKILGFKYEN---GKEYFHVKWKGWSD-SENTWEPIENLDNCPAIIKNFLDEEET 204
+EY+VEK+L + G EY +KW+G+ D S+NTW + C +I+ + +E
Sbjct: 79 DEYVVEKVLKHRMARKGGGYEYL-LKWEGYDDPSDNTWSSEADCSGCKQLIEAYWNEHGG 137
Query: 205 R 207
R
Sbjct: 138 R 138
>SPAC17A2.11 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 217
Score = 30.7 bits (66), Expect = 0.14
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -1
Query: 147 NRFPSIFTIRPSFPFHMKVFFSIFILEP*YFLNNIFFCIFYIVSLFFL 4
NR S+ +I+ FH+ F + F+L L++ F I +++S FL
Sbjct: 135 NRAKSLLSIKSHVHFHLIPFINFFLLYHQIILSHSLFHISHLISFHFL 182
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 30.3 bits (65), Expect = 0.18
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +1
Query: 37 EEY-IVEKILGFKY-ENGKEYFHVKWKGWSDSENTWEPIENL-DNCPAIIKNFLDEEETR 207
EEY IVE+I+ + E GK + VKW+ TWE + + P + FL E +
Sbjct: 301 EEYKIVERIVASETNEEGKTEYFVKWRQLPYDNCTWEDADVIYSMAPNEVYQFLQRENSP 360
Query: 208 F 210
+
Sbjct: 361 Y 361
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.1 bits (57), Expect = 1.7
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = -2
Query: 416 ISLVSSTSVAPQCSSFSVKNSIDKNFNCKFSFILLRSASSNSVNLSMRLLSSKRLPNEIS 237
IS SS+S +P +S ++ +S + + + + S+SS+S + S L SS + + S
Sbjct: 273 ISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTL-SSSSMSSSSS 331
Query: 236 SLSFCILTQNLVSSSS 189
S + + +SSSS
Sbjct: 332 FSSSPTSSSSTISSSS 347
>SPBC211.02c |cwf3|syf1|complexed with Cdc5 protein Cwf3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 790
Score = 26.6 bits (56), Expect = 2.2
Identities = 21/100 (21%), Positives = 44/100 (44%)
Frame = +1
Query: 124 SENTWEPIENLDNCPAIIKNFLDEEETRFCVKIQKLKEEISFGNLLEDNNLIERFTEFED 303
S W +L+ I+ + F +KI + +++ NLLE+N E + +
Sbjct: 479 SSKIWMYYLDLEESVGTIETTRKLYDRVFELKIATPQVVVNYANLLEENAYFEDSFKIYE 538
Query: 304 ADLSKIKENLQLKFLSILFLTEKEEHCGATLVEETRDILQ 423
++ + + + L+LT+ + T +E TRD+ +
Sbjct: 539 RGVALFSYPVAFELWN-LYLTKFVKRYQGTHMERTRDLFE 577
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 25.8 bits (54), Expect = 3.8
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 94 FHVKWKGWSDSENTWEPIENL 156
F +KW +S TWEP N+
Sbjct: 216 FLIKWVNFSHLHCTWEPYNNI 236
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 25.8 bits (54), Expect = 3.8
Identities = 24/87 (27%), Positives = 36/87 (41%)
Frame = -2
Query: 440 LTNTYNCRISLVSSTSVAPQCSSFSVKNSIDKNFNCKFSFILLRSASSNSVNLSMRLLSS 261
L+N + S V+ + SV ID N NCK + L S+ S +S
Sbjct: 114 LSNGFEAFASSHPDAIVSTEMVKESVPYKIDINENCKLDILHLSDPSAVSTPISPDYSFP 173
Query: 260 KRLPNEISSLSFCILTQNLVSSSSKKF 180
R+P I C T ++VS + +F
Sbjct: 174 LRVPINIPP-PLC--TPSVVSDTFSEF 197
>SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase
Ubp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 502
Score = 25.8 bits (54), Expect = 3.8
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +1
Query: 145 IENLDNCPAIIKNFLDEEETRFCVKIQKLKEEISFGNLLEDNNLIERFTEFEDADLSKIK 324
++N DNCP +++ R + I+KL +F + + LI+ T S +
Sbjct: 208 LKNFDNCPQLVQ--------RLAILIRKLWNHKAFKSHVSPQELIQEVTVLSHKKYSINE 259
Query: 325 ENLQLKFLS 351
+ ++FLS
Sbjct: 260 QKDPVEFLS 268
>SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase
Rdp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1215
Score = 25.8 bits (54), Expect = 3.8
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 286 FTEFEDADLSKIKENLQLKFLSILFLTEKEEHCGATLV 399
F E + LSK+ E++ K SIL L + + +TL+
Sbjct: 715 FLELTRSQLSKMNESINSKQKSILMLRDNVDEYHSTLI 752
>SPAC13G7.07 |arb2||argonaute binding protein 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 266
Score = 25.4 bits (53), Expect = 5.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +1
Query: 217 KIQKLKEEISFGNLLEDNNL 276
K + L+ +++FGN LED NL
Sbjct: 6 KSRVLQRDVNFGNCLEDMNL 25
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.0 bits (52), Expect = 6.7
Identities = 25/98 (25%), Positives = 41/98 (41%)
Frame = -2
Query: 413 SLVSSTSVAPQCSSFSVKNSIDKNFNCKFSFILLRSASSNSVNLSMRLLSSKRLPNEISS 234
+L SS+S S +S+ FS + S+SS S +SS + +SS
Sbjct: 319 NLPSSSSSLVTIGESSFPSSLLSLLTQSFSTVRSTSSSSTDQLTSASPISSSVISPSVSS 378
Query: 233 LSFCILTQNLVSSSSKKFFIIAGQLSRFSIGSQVFSLS 120
+ ILT + S + + + GSQV +L+
Sbjct: 379 PTSSILTNSGSIKSGDHQIVTTSFVQTTTHGSQVETLT 416
Score = 24.6 bits (51), Expect = 8.9
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = -2
Query: 413 SLVSSTSVAPQCSSFSVKNSIDKNFNCKFSFILLRSASSNSVNLSMRLLSSKRLPNEISS 234
SLV+S++ + SS S +NF S + L +A S S++ + + + +
Sbjct: 497 SLVTSSTSFTKFSSLSSSQLSTENFTSASSSLSLTNAKS-SLSTPSTTIPTSNSSVSLQT 555
Query: 233 LSFCILTQNLVSSS 192
S I++ ++SSS
Sbjct: 556 SSSLIISSPIISSS 569
>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1115
Score = 25.0 bits (52), Expect = 6.7
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +1
Query: 310 LSKIKENLQLKFLSILFLTEKEEHCGATLVEETRDILQLYVLVRKRCKQLMQLKEWEDHL 489
LS + L LKFL+ L E+ + +E+ L+LY K K +L+E D++
Sbjct: 1021 LSSRQRKLSLKFLAWYLLDEEIQLTEHDSIEDALTALKLYDCYDK-LKSQGKLEETLDNI 1079
Query: 490 NQVDKSKK 513
+V + K
Sbjct: 1080 YEVGRRFK 1087
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 24.6 bits (51), Expect = 8.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 265 DNNLIERFTEFEDADLSKIKEN 330
+ N RF EFE+ + S IK+N
Sbjct: 265 NENFNNRFKEFEEREKSAIKQN 286
>SPBC1289.02c |uap2||U2 snRNP-associated protein
Uap2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 367
Score = 24.6 bits (51), Expect = 8.9
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 436 VRKRCKQLMQLKEWEDHLNQVDKSKK 513
+R R +Q+ Q+ W+D +VD +K
Sbjct: 219 LRLRQQQMQQISSWDDVDEEVDDKRK 244
>SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 808
Score = 24.6 bits (51), Expect = 8.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 511 FLTYQPDLNDPPILSIALIVYI 446
F T PD+ +PP L +AL YI
Sbjct: 463 FQTQYPDIANPPTLILALKGYI 484
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 24.6 bits (51), Expect = 8.9
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 3/51 (5%)
Frame = +1
Query: 118 SDSEN-TWEPIENLDNCPAIIKN--FLDEEETRFCVKIQKLKEEISFGNLL 261
SDSE+ T + + L+N K L EE+ R ++ +K + EI+FGN L
Sbjct: 161 SDSEDETQQLLRELENIKQERKREQMLQEEKNR-ALEQEKREREIAFGNEL 210
>SPAC10F6.01c ||SPAC4C5.05c|sulfite reductase beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1473
Score = 24.6 bits (51), Expect = 8.9
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 7/40 (17%)
Frame = +1
Query: 49 VEKILGFKYENGKEY-----FHVKWKGWSDSENT--WEPI 147
VE++LG+K+E +++ H ++GW +E W I
Sbjct: 1209 VEEVLGYKFEEARDHPQFIKNHDDFEGWHKTEKNKYWRSI 1248
>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1375
Score = 24.6 bits (51), Expect = 8.9
Identities = 18/66 (27%), Positives = 26/66 (39%)
Frame = +1
Query: 187 LDEEETRFCVKIQKLKEEISFGNLLEDNNLIERFTEFEDADLSKIKENLQLKFLSILFLT 366
LD F +KL + + F N+ D L F+ L +K + KFL+ L
Sbjct: 185 LDINTALFYDCARKLAKSLRFANVSRDPRLSSELLPFQMRVLEWMKRREEEKFLTSNDLP 244
Query: 367 EKEEHC 384
HC
Sbjct: 245 PLWYHC 250
>SPBC887.14c |pfh1|pif1|pif1 helicase homolog
Pfh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 805
Score = 24.6 bits (51), Expect = 8.9
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Frame = -2
Query: 302 SSNSVNLSMRLLS---SKRLPNEISSLSFCILTQNLVSSS------SKKFFIIAGQLSRF 150
+S S ++S +S S +L N SS S L + +S S SKKF + S+
Sbjct: 230 TSTSADISQHTVSNDSSNKLSNGRSS-SLDSLAKKRMSKSKSTPQISKKFSVPLNSASKS 288
Query: 149 SIGSQVFSLSD 117
IGS +F SD
Sbjct: 289 PIGSSLFKTSD 299
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting protein
3 homolog Bud6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1385
Score = 24.6 bits (51), Expect = 8.9
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = -2
Query: 437 TNTYNCRISLVSSTSVAPQCSSFSVKNSIDKNFNCKFSFILLRSASSNSVN 285
TN N +L SS + ++FSV +SID F + + L AS ++
Sbjct: 924 TNHTNDSAALKSSEDHSKLANNFSVPDSIDHKFYQQVKNMQLELASLKQIS 974
>SPAC13A11.05 |||peptidase family M17|Schizosaccharomyces pombe|chr
1|||Manual
Length = 513
Score = 24.6 bits (51), Expect = 8.9
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Frame = -2
Query: 398 TSVAPQCSSFSV--KNSIDKNFNCKFSFILLRSASSNSVNLSMRLLSSKRLPNEISSLSF 225
TS AP+ +F + S K + + + + + NL+ L+ N ++SL F
Sbjct: 156 TSPAPERLTFQLLSNTSEKKTATAEENAFKVGLIEAAAQNLARSLMECPA--NYMTSLQF 213
Query: 224 CILTQNLVSSSSK-KFFI 174
C Q L +SSK K F+
Sbjct: 214 CHFAQELFQNSSKVKVFV 231
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.136 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,161,165
Number of Sequences: 5004
Number of extensions: 46840
Number of successful extensions: 189
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 189
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 208287218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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