Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30172
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0028 - 359988-359996,360228-360332,360415-360536,360676-36... 64 8e-11
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 50 1e-06
05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,753... 47 8e-06
10_05_0046 + 8516043-8516425,8517908-8518019,8518276-8518377,851... 40 0.001
04_01_0500 - 6540769-6541482,6541819-6541877,6541965-6542064,654... 30 1.3
08_01_0777 - 7542478-7544988 29 1.7
12_01_0618 - 5099021-5099668,5099701-5100221,5100311-5100352,510... 29 2.9
01_06_1556 - 38222071-38222708,38222795-38222822,38222950-382230... 28 5.1
12_02_1113 - 26165074-26165889,26166077-26166202,26166294-261664... 27 6.8
06_01_0584 - 4178391-4178732,4178854-4178915,4180361-4180481,418... 27 6.8
02_02_0207 - 7845072-7845102,7845235-7845341,7845444-7845521,784... 27 6.8
04_04_0010 - 22137258-22137428,22137734-22137794,22137917-221379... 27 8.9
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 27 8.9
>10_01_0028 -
359988-359996,360228-360332,360415-360536,360676-360763,
360988-361056,361132-361461,361544-361610,361695-361753,
361838-362056,362224-362289,362370-362500,362683-362782,
362864-363001,363111-363218,363627-363723,363806-364257
Length = 719
Score = 63.7 bits (148), Expect = 8e-11
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Frame = +1
Query: 37 EEYIVEKILGFKYE-NGKE---YFHVKWKGWSDSENTWEPIENLDNCPAIIKNFLDE 195
+E++VEK+ G Y +G+E YF V+WKG+ E+TWEPIENL +CP IK F+ E
Sbjct: 413 DEFVVEKLAGICYGGSGREDGLYFKVQWKGYGREEDTWEPIENLRDCPLKIKEFVQE 469
>03_02_0234 +
6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 50.0 bits (114), Expect = 1e-06
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 2/108 (1%)
Frame = +1
Query: 40 EYIVEKILGFKYENGKE--YFHVKWKGWSDSENTWEPIENLDNCPAIIKNFLDEEETRFC 213
E ++E G GK +F V+WKG+ S +TWEPI+ L +CP IK F+++
Sbjct: 561 EELLEICYGDPSNTGKNGLWFKVRWKGYDPSYDTWEPIDGLSDCPERIKEFVEKGHKENI 620
Query: 214 VKIQKLKEEISFGNLLEDNNLIERFTEFEDADLSKIKENLQLKFLSIL 357
+ + + I G + + RF + D L K + F+ I+
Sbjct: 621 LPLPGAVDVICGGPPCQGISGFNRFRKHND-PLEDEKNKQLVVFMDIV 667
>05_03_0031 - 7534327-7534480,7535546-7535649,7535724-7535793,
7535889-7535932,7536042-7536146,7536223-7536344,
7536807-7536894,7536966-7537052,7537718-7537786,
7537859-7538188,7539777-7539824,7540003-7540069,
7540150-7540208,7541220-7541453,7541536-7541601,
7541684-7541883,7542104-7542197,7542295-7542414,
7542596-7542703,7542808-7542871,7543378-7543409,
7546049-7548007
Length = 1407
Score = 47.2 bits (107), Expect = 8e-06
Identities = 17/35 (48%), Positives = 24/35 (68%)
Frame = +1
Query: 91 YFHVKWKGWSDSENTWEPIENLDNCPAIIKNFLDE 195
YF V+WKG+ +TWEP+E L NC I++F+ E
Sbjct: 957 YFKVRWKGYGPHHDTWEPVEGLRNCKEAIRDFVIE 991
>10_05_0046 +
8516043-8516425,8517908-8518019,8518276-8518377,
8518605-8518657,8518976-8519062,8519162-8519830,
8520154-8520214,8520295-8520342
Length = 504
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +1
Query: 109 KGWSDSENTWEPIENLDNCPAIIKNF 186
+GW +S NTWEP+ENL C II F
Sbjct: 218 RGWPESANTWEPLENLSACSDIIDAF 243
>04_01_0500 -
6540769-6541482,6541819-6541877,6541965-6542064,
6542113-6542322,6542507-6542765,6544022-6544215
Length = 511
Score = 29.9 bits (64), Expect = 1.3
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -2
Query: 419 RISLVSSTSVAPQCSSFSVKNSIDKNFNCKFSFILLRSASSN 294
R S+++ + P C S N+ D NF K I+L ASS+
Sbjct: 85 RSSVITWLHMLPTCPSDPFSNTGDANFQIKTGLIILMQASSS 126
>08_01_0777 - 7542478-7544988
Length = 836
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +1
Query: 55 KILGFKYENGKEYFHVKWKGWSDSENTWEPIENL 156
K+ GF EN +Y V WSD+ N WE ++NL
Sbjct: 253 KLRGFLQEN--KYLLVLDDIWSDNVNDWEQLKNL 284
>12_01_0618 -
5099021-5099668,5099701-5100221,5100311-5100352,
5100905-5100962
Length = 422
Score = 28.7 bits (61), Expect = 2.9
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 307 DLSKIKENLQLKFLSILFLTEKEEHCGATLVEETRDILQLYVLV 438
D SK+ E Q IL T + EH ATLVEE I L ++
Sbjct: 296 DWSKLTEMAQQAVEVILTQTSEVEHLRATLVEEANKIGDLKTML 339
>01_06_1556 -
38222071-38222708,38222795-38222822,38222950-38223070,
38223206-38223318,38223424-38223506,38223868-38223930,
38224100-38224254,38224411-38224580,38225101-38225189,
38225304-38225496,38225655-38225779,38226069-38226475,
38226855-38226919,38227414-38227692,38227772-38227845,
38228241-38228292,38228366-38228473,38228871-38228972,
38229100-38229173,38229262-38229435,38229667-38229771,
38229867-38229977,38230364-38230487
Length = 1150
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 94 FHVKWKGWSDSENTWEP 144
F VKWKG E TWEP
Sbjct: 474 FLVKWKGLDYCEATWEP 490
>12_02_1113 -
26165074-26165889,26166077-26166202,26166294-26166457,
26166539-26166576,26166670-26166885,26166984-26167145,
26167212-26167497,26167585-26167761,26167864-26167971,
26168076-26168175,26168283-26168359,26168608-26168803,
26169032-26169363,26169476-26169589,26169651-26169753
Length = 1004
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/72 (25%), Positives = 38/72 (52%)
Frame = +1
Query: 298 EDADLSKIKENLQLKFLSILFLTEKEEHCGATLVEETRDILQLYVLVRKRCKQLMQLKEW 477
+DA + ++E +Q S+ + ++ L E+ +++ ++ RK +Q + K
Sbjct: 702 KDAQIKSMEETIQ----SLEAKNKAKDLLTMNLQEKIKELEAQLLVERKIARQHVDNKIA 757
Query: 478 EDHLNQVDKSKK 513
+DHL+Q +SKK
Sbjct: 758 QDHLHQQQQSKK 769
>06_01_0584 -
4178391-4178732,4178854-4178915,4180361-4180481,
4180592-4180732,4180830-4180959,4182306-4182436,
4182528-4182601,4182680-4182741,4183135-4183209,
4184658-4184760,4184835-4184991,4185549-4185743,
4186204-4186282,4186697-4186806,4187249-4187374,
4187475-4187541,4187622-4187791,4187880-4188018,
4188361-4188522,4188672-4188772,4188852-4188994,
4189438-4189537,4190364-4190414,4191062-4191169,
4191279-4191494,4191585-4191721,4191820-4191915,
4192017-4192234,4192764-4192925,4193006-4193163,
4194221-4194379
Length = 1364
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 49 VEKILGF-KYENGKEYFHVKWKGWSDSENTWE 141
V++IL K G+ ++VKWK + E TWE
Sbjct: 153 VDRILATRKSSTGEREYYVKWKELTYDECTWE 184
>02_02_0207 -
7845072-7845102,7845235-7845341,7845444-7845521,
7845966-7846169,7846389-7846445,7846513-7846578,
7847976-7848020,7848129-7848170,7848563-7848649,
7848830-7848919,7849226-7849431,7849565-7849604
Length = 350
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +1
Query: 130 NTWEPIENLDNCPAIIKNFLDEEETRFCVKIQKLKEEISFGNLL 261
N+W ++ + + NFL+E++ FC + KLK +S NLL
Sbjct: 83 NSWIGLKGIGYRMKMETNFLNEQDGHFCGQ-AKLKPLLSRANLL 125
>04_04_0010 -
22137258-22137428,22137734-22137794,22137917-22137984,
22138524-22138733,22138867-22138907,22139011-22139060,
22139260-22139348,22139468-22139542,22139791-22139882,
22140131-22140182,22140515-22140631,22141267-22141496,
22141618-22141672,22141781-22141900
Length = 476
Score = 27.1 bits (57), Expect = 8.9
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = -2
Query: 257 RLPNEISSLSFCILTQNLVSSSSKKFFIIAGQLSRFSIGSQVFS 126
RLP +S + C++ Q L S S+ + I + S S VFS
Sbjct: 389 RLPYRVSRIVICVVVQVLCSYSTLPLYAIVSHMGS-SFKSAVFS 431
>01_01_1018 -
8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Frame = +1
Query: 112 GWSDSENTWEPIENLDNCPAIIKNFLDEEETRFCVKIQKLKEEISF--GNLLEDNNLIER 285
GW+ S ++N+D ++++N + + + + + KE +F L+E I+R
Sbjct: 26 GWTQSAAEILQLDNMDQDTSVVRNIIHRKIVEY---LNERKEFCNFDLSFLMEIGKCIDR 82
Query: 286 FTEFEDADLSKIK 324
FE AD SKIK
Sbjct: 83 HL-FEKAD-SKIK 93
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.136 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,956,645
Number of Sequences: 37544
Number of extensions: 225705
Number of successful extensions: 657
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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