Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV30172
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 53 1e-07
Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 51 6e-07
AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 51 6e-07
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 41 5e-04
Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical pr... 41 6e-04
AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain... 41 6e-04
AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain... 41 6e-04
U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 40 0.001
U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical pr... 37 0.010
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 37 0.010
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 34 0.069
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 33 0.12
U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 32 0.28
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 31 0.65
Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical pr... 30 0.85
U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 30 0.85
U64848-7|ABS83846.1| 144|Caenorhabditis elegans Hypothetical pr... 29 2.0
U61954-3|AAK29809.1| 863|Caenorhabditis elegans Hypothetical pr... 29 2.0
U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical pr... 29 2.0
U61954-1|AAK29810.1| 955|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81534-2|CAB04344.2| 226|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr... 28 3.4
U61954-14|AAK29805.2| 352|Caenorhabditis elegans Him-three para... 28 3.4
U39674-7|AAA80417.1| 91|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 6.0
AJ276028-1|CAC81655.1| 816|Caenorhabditis elegans TRP homlogous... 27 6.0
AF040654-5|AAN65302.2| 816|Caenorhabditis elegans Trp (transien... 27 6.0
AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transien... 27 6.0
Z66520-9|CAA91390.2| 335|Caenorhabditis elegans Hypothetical pr... 27 8.0
U41278-2|AAK31509.1| 403|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF016673-5|AAB66123.1| 684|Caenorhabditis elegans Hypothetical ... 27 8.0
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/73 (35%), Positives = 44/73 (60%)
Frame = +1
Query: 34 AEEYIVEKILGFKYENGKEYFHVKWKGWSDSENTWEPIENLDNCPAIIKNFLDEEETRFC 213
+E Y VE IL + + GK F++KW G+ + N+WEP EN+ + P +I+ F E R
Sbjct: 5 SELYTVESILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVD-PTLIEAFFTREAAR-K 62
Query: 214 VKIQKLKEEISFG 252
+I+ K++++ G
Sbjct: 63 AEIKAKKDKMAAG 75
>Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical
protein K08H2.6 protein.
Length = 184
Score = 50.8 bits (116), Expect = 6e-07
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +1
Query: 43 YIVEKILGFKYENGKEYFHVKWKGWSDSENTWEPIENLDNCPAIIKNFLDEEETR 207
++VEK+L + G +++KW+G+ +SE +WEPIENL C +I+ + E R
Sbjct: 37 FVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENL-QCDRMIQEYEKEAAKR 90
>AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin
protein 1 homolog protein.
Length = 184
Score = 50.8 bits (116), Expect = 6e-07
Identities = 21/55 (38%), Positives = 35/55 (63%)
Frame = +1
Query: 43 YIVEKILGFKYENGKEYFHVKWKGWSDSENTWEPIENLDNCPAIIKNFLDEEETR 207
++VEK+L + G +++KW+G+ +SE +WEPIENL C +I+ + E R
Sbjct: 37 FVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENL-QCDRMIQEYEKEAAKR 90
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 41.1 bits (92), Expect = 5e-04
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = +1
Query: 37 EEYIVEKILGFKYENGKEYFHVKWKGWSDSENTWEPIENLDNC 165
E + VEKIL K + V+W G+ E+TWEP E+L C
Sbjct: 22 EIFEVEKILAHKVTDNLLVLQVRWLGYGADEDTWEPEEDLQEC 64
>Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical
protein K01G5.2c protein.
Length = 303
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 43 YIVEKILGFKY-ENGKEYFHVKWKGWSDSENTWEPIENLDNCPAIIKNFLDEEETR 207
++VEK+L + + G++ F ++W+G+ +S+++WEP ENL C ++ F E R
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENL-QCVEMLDEFEREFSKR 73
>Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical
protein K01G5.2b protein.
Length = 301
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 43 YIVEKILGFKY-ENGKEYFHVKWKGWSDSENTWEPIENLDNCPAIIKNFLDEEETR 207
++VEK+L + + G++ F ++W+G+ +S+++WEP ENL C ++ F E R
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENL-QCVEMLDEFEREFSKR 73
>Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical
protein K01G5.2a protein.
Length = 175
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 43 YIVEKILGFKY-ENGKEYFHVKWKGWSDSENTWEPIENLDNCPAIIKNFLDEEETR 207
++VEK+L + + G++ F ++W+G+ +S+++WEP ENL C ++ F E R
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENL-QCVEMLDEFEREFSKR 73
>AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain
protein protein.
Length = 175
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 43 YIVEKILGFKY-ENGKEYFHVKWKGWSDSENTWEPIENLDNCPAIIKNFLDEEETR 207
++VEK+L + + G++ F ++W+G+ +S+++WEP ENL C ++ F E R
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENL-QCVEMLDEFEREFSKR 73
>AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain
protein protein.
Length = 301
Score = 40.7 bits (91), Expect = 6e-04
Identities = 19/56 (33%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +1
Query: 43 YIVEKILGFKY-ENGKEYFHVKWKGWSDSENTWEPIENLDNCPAIIKNFLDEEETR 207
++VEK+L + + G++ F ++W+G+ +S+++WEP ENL C ++ F E R
Sbjct: 19 FMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENL-QCVEMLDEFEREFSKR 73
>U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical
protein T12E12.2 protein.
Length = 891
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = +1
Query: 70 KYENGKEYFHVKWKGWSDSENTWEPIENLDNCPAIIK 180
K + K + V W+G+ E TWEP ENL+NC + K
Sbjct: 43 KRRHSKYAYLVHWRGYDWKERTWEPEENLENCEELQK 79
>U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical
protein F32E10.2 protein.
Length = 270
Score = 36.7 bits (81), Expect = 0.010
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +1
Query: 40 EYIVEKILGFKYENGKEYFHVKWKGWSD---SENTWEPIENLDNCPAIIKNFLDEEE 201
EY VE++L + G + V+WKG+ + WE E+LDNC ++ + +E
Sbjct: 86 EYAVERVLAHRKVKGSPLYLVQWKGYPHPVWNSEMWE--EDLDNCKDLLAAYKKHQE 140
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Frame = +1
Query: 34 AEEYIVEKILGFKYEN---GKEYFHVKWKGWSDS-ENTWEPIENLDNCPAIIKNFLDEEE 201
++EY+VEKI+ +Y N + + V W+G+ D NT E L+NC ++ + +E +
Sbjct: 111 SKEYVVEKIVAHRYPNDRLNQPLYLVMWRGFPDPVSNTEMWGEELENCQELLDAYNEEHD 170
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 33.9 bits (74), Expect = 0.069
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 46 IVEKILGFKYEN-GKEYFHVKWKGWSDSENTWEPIE 150
IV++++ E+ G+E+ +KWK E TWEPIE
Sbjct: 1105 IVDRVVDLITEDDGQEFVLIKWKSLGYEEVTWEPIE 1140
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 33.1 bits (72), Expect = 0.12
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +1
Query: 85 KEYFHVKWKGWSDSENTWEPIENL 156
++ F VKW GWS NTWE +L
Sbjct: 236 EQQFFVKWTGWSHLHNTWESENSL 259
>U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical
protein C29H12.5 protein.
Length = 706
Score = 31.9 bits (69), Expect = 0.28
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 91 YFHVKWKGWSDSENTWEPIENL 156
+F VKW G+ + E TWEP N+
Sbjct: 94 FFLVKWLGYGNKEMTWEPESNI 115
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 30.7 bits (66), Expect = 0.65
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Frame = +1
Query: 37 EEYIVEKILGFKYENGK---EYFHVKWKGWSDSENTWEPIEN 153
+ ++VEK+ +Y NGK F V W+ +D +WEPIEN
Sbjct: 47 DHWVVEKVQEMRY-NGKLKRVEFLVLWQ--ADKSTSWEPIEN 85
>Z81083-3|CAB03104.1| 559|Caenorhabditis elegans Hypothetical
protein F44F1.4 protein.
Length = 559
Score = 30.3 bits (65), Expect = 0.85
Identities = 30/110 (27%), Positives = 53/110 (48%)
Frame = +1
Query: 187 LDEEETRFCVKIQKLKEEISFGNLLEDNNLIERFTEFEDADLSKIKENLQLKFLSILFLT 366
LDEEE + +KIQ+L+++ +D +++ E E D+ K+ E K L
Sbjct: 386 LDEEEQQKVLKIQELEKQ-------KDEQIMKSMLELE--DMKKLLEEKDEKILM----- 431
Query: 367 EKEEHCGATLVEETRDILQLYVLVRKRCKQLMQLKEWEDHLNQVDKSKKI 516
H G V + + +L K + +M++KE DH +++K+K I
Sbjct: 432 ----HVGKQRVMK----FDMDILKNKLDESIMKIKEANDHNLELEKAKLI 473
>U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical
protein F57C12.2 protein.
Length = 556
Score = 30.3 bits (65), Expect = 0.85
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +1
Query: 124 SENTW--EPIENLDNCPAIIKNFLDEEETRFCVKIQKLKEEISFGNLLEDNNLIERFTEF 297
+EN W E L + I+N +E + K+ +LKEE N L NN + E
Sbjct: 81 TENMWSLEYESKLSDAKTKIEN-QKKEINKLNEKVTQLKEEQQNSNQLSKNNESDMRNEN 139
Query: 298 EDADLSKIKENLQLKFLSILFLTEKEE 378
A++ K++EN+ + + L +T ++
Sbjct: 140 RLAEVRKVQENVWRQEVEKLSVTGAQQ 166
>U64848-7|ABS83846.1| 144|Caenorhabditis elegans Hypothetical
protein C50E3.11 protein.
Length = 144
Score = 29.1 bits (62), Expect = 2.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 368 RKRSIVEPHWLKKLEISYNYMYWLGR 445
R + EPHW+ ++E+ +WL R
Sbjct: 46 RMDRVAEPHWVHRMELEPTVSHWLDR 71
>U61954-3|AAK29809.1| 863|Caenorhabditis elegans Hypothetical
protein F41H10.6a protein.
Length = 863
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 217 KIQKLKEEISFGNLLEDNNLIERFTEFEDADLSKIKENLQLKFL 348
+I K+KE ++ +LE ++ F E +DADL + +K L
Sbjct: 40 RILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDL 83
>U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical
protein F41H10.6c protein.
Length = 957
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 217 KIQKLKEEISFGNLLEDNNLIERFTEFEDADLSKIKENLQLKFL 348
+I K+KE ++ +LE ++ F E +DADL + +K L
Sbjct: 40 RILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDL 83
>U61954-1|AAK29810.1| 955|Caenorhabditis elegans Hypothetical
protein F41H10.6b protein.
Length = 955
Score = 29.1 bits (62), Expect = 2.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 217 KIQKLKEEISFGNLLEDNNLIERFTEFEDADLSKIKENLQLKFL 348
+I K+KE ++ +LE ++ F E +DADL + +K L
Sbjct: 40 RILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDL 83
>Z81534-2|CAB04344.2| 226|Caenorhabditis elegans Hypothetical
protein F37H8.3 protein.
Length = 226
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +1
Query: 220 IQKLKEEISFGNLLEDNNLIERFTEFEDADLSKIKENLQLKFLSIL 357
+Q LK + +GN L DN +I+ FTE + KI +N+Q K + IL
Sbjct: 77 LQYLKHK--YGNKLTDNVVIKPFTECLRGENVKIHKNMQ-KTVEIL 119
>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
F54B3.1b protein.
Length = 3394
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +1
Query: 232 KEEISFGNLLEDNNLIERFTEFEDADLSKIKENLQLKFLSILFLTEKEEHCGATLVEETR 411
K + FG + +LIER ++ DL K + +K+ L+LT + T +EE
Sbjct: 3189 KRKCLFGASMNVFHLIERLLDYYQYDLILSKNLVAIKY---LYLTREHNDIILTRMEEEE 3245
Query: 412 DIL 420
D++
Sbjct: 3246 DLM 3248
>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
F54B3.1a protein.
Length = 3396
Score = 28.3 bits (60), Expect = 3.4
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +1
Query: 232 KEEISFGNLLEDNNLIERFTEFEDADLSKIKENLQLKFLSILFLTEKEEHCGATLVEETR 411
K + FG + +LIER ++ DL K + +K+ L+LT + T +EE
Sbjct: 3191 KRKCLFGASMNVFHLIERLLDYYQYDLILSKNLVAIKY---LYLTREHNDIILTRMEEEE 3247
Query: 412 DIL 420
D++
Sbjct: 3248 DLM 3250
>U61954-14|AAK29805.2| 352|Caenorhabditis elegans Him-three paralog
protein 1 protein.
Length = 352
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = -2
Query: 476 HSFNCINCLHLFLTNTYNCRISLVSSTSVAPQCSSFSVKNSIDKNFNCKFSFILLRSASS 297
H+ N + C + ++++Y ++L F+ N + K+FN + S L A++
Sbjct: 240 HAAN-MECWSMLMSDSYEAELTLKRHLDKVSDRHGFNPVNVLYKSFNSEDSDTSLSQATT 298
Query: 296 NSVN 285
SVN
Sbjct: 299 ESVN 302
>U39674-7|AAA80417.1| 91|Caenorhabditis elegans Hypothetical
protein C06E2.2 protein.
Length = 91
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -2
Query: 446 LFLTNTYNCRISLVSSTSVAPQCSSFSVKNSIDKNF---NCKFSFILLRSASSNSVNLSM 276
+ LT+TYNCR + V Q S + ++ K F C + I + ++ NLS+
Sbjct: 20 VILTDTYNCRFVIQEEIDVESQMSDGTKSETLTKLFFHLACADNIIKIGESAYTKENLSI 79
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +1
Query: 88 EYFHVKWKGWSDSENTWEPIENLDNCPAIIKNFLDEEETRFCVKIQKLK----EEISFGN 255
E F ++ GW + + E +++ +DE E CV + ++ ++ F N
Sbjct: 861 EPFLAEFNGWYKRTRSTKAFELCMTASEMLRTDIDENEFLDCVGLPNMETDALDDFDF-N 919
Query: 256 LLEDNNLIERFTEFEDA 306
LLED ++ E E E++
Sbjct: 920 LLEDFDVDEENDELENS 936
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 6.0
Identities = 19/77 (24%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +1
Query: 88 EYFHVKWKGWSDSENTWEPIENLDNCPAIIKNFLDEEETRFCVKIQKLK----EEISFGN 255
E F ++ GW + + E +++ +DE E CV + ++ ++ F N
Sbjct: 861 EPFLAEFNGWYKRTRSTKAFELCMTASEMLRTDIDENEFLDCVGLPNMETDALDDFDF-N 919
Query: 256 LLEDNNLIERFTEFEDA 306
LLED ++ E E E++
Sbjct: 920 LLEDFDVDEENDELENS 936
>AJ276028-1|CAC81655.1| 816|Caenorhabditis elegans TRP homlogous
cation channel proteinprotein.
Length = 816
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 37 EEYIVEKILGFKYENGKEYFHVKWKGWSDSENTWEPI 147
E+Y EK L +KYE+ KE K+K S +T E +
Sbjct: 580 EQYKNEKSLSYKYEHLKESCDDKYKSCSSIYHTAETL 616
>AF040654-5|AAN65302.2| 816|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 2, isoform a
protein.
Length = 816
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 37 EEYIVEKILGFKYENGKEYFHVKWKGWSDSENTWEPI 147
E+Y EK L +KYE+ KE K+K S +T E +
Sbjct: 580 EQYKNEKSLSYKYEHLKESCDDKYKSCSSIYHTAETL 616
>AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 2, isoform b
protein.
Length = 886
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 37 EEYIVEKILGFKYENGKEYFHVKWKGWSDSENTWEPI 147
E+Y EK L +KYE+ KE K+K S +T E +
Sbjct: 580 EQYKNEKSLSYKYEHLKESCDDKYKSCSSIYHTAETL 616
>Z66520-9|CAA91390.2| 335|Caenorhabditis elegans Hypothetical
protein F49E12.5a protein.
Length = 335
Score = 27.1 bits (57), Expect = 8.0
Identities = 14/57 (24%), Positives = 30/57 (52%)
Frame = -2
Query: 434 NTYNCRISLVSSTSVAPQCSSFSVKNSIDKNFNCKFSFILLRSASSNSVNLSMRLLS 264
++Y+CR +++T+ + + SID+ F KF+ + + S + L++ LS
Sbjct: 102 SSYDCRFITIATTTSNCGMALVQLAMSIDRVFALKFNRVYYKLKSIPGITLALITLS 158
>U41278-2|AAK31509.1| 403|Caenorhabditis elegans Hypothetical
protein F33G12.3 protein.
Length = 403
Score = 27.1 bits (57), Expect = 8.0
Identities = 19/63 (30%), Positives = 29/63 (46%)
Frame = +1
Query: 265 DNNLIERFTEFEDADLSKIKENLQLKFLSILFLTEKEEHCGATLVEETRDILQLYVLVRK 444
+ LIER E ED+D ++ E+ SI L + +TL DI + +LV
Sbjct: 194 NEELIERLGEEEDSDWDEVDEDA----ASIPTLPSSQSQSESTLPRLNLDISAVMLLVSN 249
Query: 445 RCK 453
C+
Sbjct: 250 MCE 252
>AF016673-5|AAB66123.1| 684|Caenorhabditis elegans Hypothetical
protein T06D4.4 protein.
Length = 684
Score = 27.1 bits (57), Expect = 8.0
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Frame = +1
Query: 112 GWSDSENTWEPIENLDNCPAIIKNFLDEEETRFCVKIQK-LK----EEISFGNLLEDNNL 276
G SE+T + + + ++F+DEE+ V++ K LK E IS G+ L+ +L
Sbjct: 351 GAKHSEHTLIDLLPRGSLQVLSQDFVDEEDQGVMVEMAKDLKKHVVEMISEGSSLDKGHL 410
Query: 277 IERFTEFEDADL-SKIKENLQLKFLSILFLTEKEEHCGATLVEETRDILQLYVLVRKRCK 453
+ F E E L K+++ L + + L + E T + I+Q L R R +
Sbjct: 411 V--FEEKERRKLIRKVQDILVVTKYPLEILNQNFEKLNLTYSDSLHKIIQ--KLRRFRSE 466
Query: 454 QLMQ 465
QL++
Sbjct: 467 QLIE 470
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.136 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,628,811
Number of Sequences: 27780
Number of extensions: 249670
Number of successful extensions: 929
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 926
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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