Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30171
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-964|AAN12098.1|  682|Drosophila melanogaster CG10625-PC...    29   4.9  
AE014296-963|AAF50773.2|  682|Drosophila melanogaster CG10625-PB...    29   4.9  
AY069580-1|AAL39725.1|  406|Drosophila melanogaster LD31675p pro...    28   6.5  
AE014134-2099|AAF53122.1|  406|Drosophila melanogaster CG14939-P...    28   6.5  

>AE014296-964|AAN12098.1|  682|Drosophila melanogaster CG10625-PC,
           isoform C protein.
          Length = 682

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 122 PFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAY 223
           P+    G+Y  + GRY+   D  GRY  D+SG Y
Sbjct: 462 PYTPDNGKYNGNGGRYNGIND--GRYYHDDSGKY 493


>AE014296-963|AAF50773.2|  682|Drosophila melanogaster CG10625-PB,
           isoform B protein.
          Length = 682

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 122 PFVYKPGRYVADPGRYDPSRDNSGRYIPDNSGAY 223
           P+    G+Y  + GRY+   D  GRY  D+SG Y
Sbjct: 462 PYTPDNGKYNGNGGRYNGIND--GRYYHDDSGKY 493


>AY069580-1|AAL39725.1|  406|Drosophila melanogaster LD31675p
           protein.
          Length = 406

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 361 HCSPARREAYHSRASHTHIRCQQGGHTHIRCQQGG 465
           H S  + + +H  AS  H+     GH   + QQGG
Sbjct: 38  HTSQHQLDGHHGSASAVHLHHHHHGHNQQQNQQGG 72


>AE014134-2099|AAF53122.1|  406|Drosophila melanogaster CG14939-PA
           protein.
          Length = 406

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +1

Query: 361 HCSPARREAYHSRASHTHIRCQQGGHTHIRCQQGG 465
           H S  + + +H  AS  H+     GH   + QQGG
Sbjct: 38  HTSQHQLDGHHGSASAVHLHHHHHGHNQQQNQQGG 72


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,367,366
Number of Sequences: 53049
Number of extensions: 311552
Number of successful extensions: 1265
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)