Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV30166
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory pro...    24   0.92 
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.2  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    23   1.2  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    22   3.7  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.6  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   8.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   8.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   8.6  

>DQ855493-1|ABH88180.1|  127|Tribolium castaneum chemosensory
          protein 7 protein.
          Length = 127

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 14 ALVLCGLLAAVSAAPQYY 67
          A++LC  L AVSAA   Y
Sbjct: 6  AVILCAFLVAVSAAENKY 23


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 374 NLPWDVNSEGSWV 412
           N  WDV+S GSW+
Sbjct: 187 NAWWDVHSTGSWL 199



 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 452 QKQPEDSKRPVAEPTETTSTN 514
           Q  P  S  P + PT+ TST+
Sbjct: 72  QGAPSPSSTPSSLPTQRTSTS 92


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
 Frame = +2

Query: 170 EMQHLDNMMKELSLKFPSI-INEGRVEGD 253
           EM++L+ ++KE    +PS+ + E R+E D
Sbjct: 43  EMKYLEMVLKEAQRLYPSVPVIERRLEVD 71


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = +2

Query: 8   MIALVLCGLLAAVSAAPQYYHGSSHWPYHHYD 103
           MI L+    + AVSAAP  ++ S    Y H D
Sbjct: 1   MIPLIAIAGILAVSAAPAEFYESR---YDHLD 29


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 136 GHTFALVQPCQRN 174
           GHTF L  P Q +
Sbjct: 261 GHTFQLADPAQHD 273


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 171 SLARLDQSECVSNMLSRT*GLK 106
           S+ RLDQ +C   ++    GLK
Sbjct: 8   SVFRLDQDQCSHRIVREHLGLK 29


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 171 SLARLDQSECVSNMLSRT*GLK 106
           S+ RLDQ +C   ++    GLK
Sbjct: 322 SVFRLDQDQCSHRIVREHLGLK 343


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 171 SLARLDQSECVSNMLSRT*GLK 106
           S+ RLDQ +C   ++    GLK
Sbjct: 555 SVFRLDQDQCSHRIVREHLGLK 576


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 171 SLARLDQSECVSNMLSRT*GLK 106
           S+ RLDQ +C   ++    GLK
Sbjct: 555 SVFRLDQDQCSHRIVREHLGLK 576


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,424
Number of Sequences: 336
Number of extensions: 2533
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)